Factsheet for Zm00001d003259_P006

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, nucleus, plasma membrane

Predictor Summary:

endoplasmic reticulum 1
mitochondrion 2
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane
Any Predictor:	endoplasmic reticulum, mitochondrion, nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG26585	Sorghum	nucleus	85.63	92.4
Os04t0483600-01	Rice	nucleus	77.04	82.63
TraesCS2A01G321200.1	Wheat	nucleus	76.62	82.3
TraesCS2B01G361300.1	Wheat	nucleus	76.48	82.15
GSMUA_Achr10P...	Banana	cytosol	25.77	80.62
TraesCS2D01G342300.1	Wheat	nucleus	65.92	76.85
HORVU2Hr1G083780.14	Barley	nucleus, plastid	71.83	76.46
KRH63715	Soybean	nucleus	62.39	67.12
KRH54239	Soybean	nucleus	61.69	66.36
CDY34042	Canola	nucleus	61.69	66.06
Solyc03g111390.2.1	Tomato	nucleus	62.68	65.83
PGSC0003DMT400039402	Potato	nucleus	62.54	65.68
VIT_17s0000g10130.t01	Wine grape	nucleus	62.68	65.25
AT5G50310.1	Thale cress	nucleus	61.13	65.17
Bra000617.1-P	Field mustard	endoplasmic reticulum	64.08	47.74
CDX83165	Canola	nucleus	61.69	44.15
Zm00001d037558_P001	Maize	cytosol	4.08	23.97
Zm00001d019221_P001	Maize	cytosol	10.85	20.16
Zm00001d034759_P001	Maize	cytosol	11.83	16.8
Zm00001d040606_P001	Maize	cytosol	13.52	15.48
Zm00001d031492_P001	Maize	cytosol	3.1	15.38
Zm00001d009123_P001	Maize	cytosol	13.24	15.04
Zm00001d048718_P010	Maize	mitochondrion	13.94	14.24
Zm00001d041692_P001	Maize	nucleus	10.85	14.18
Zm00001d038406_P001	Maize	cytosol	4.08	13.3
Zm00001d034758_P003	Maize	plastid	12.54	13.07
Zm00001d046434_P003	Maize	plastid	10.85	12.64
Zm00001d051876_P002	Maize	nucleus	10.14	12.12
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	12.96	12.03
Zm00001d012892_P002	Maize	plastid	13.1	11.88
Zm00001d021624_P002	Maize	mitochondrion	12.96	8.49

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.2	UniProt:A0A1D6E802	InterPro:DUF4110	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller
ProteinID:ONM16556.1	PFAM:PF13415	PFAM:PF13418	PFAM:PF13422	PANTHER:PTHR23244	PANTHER:PTHR23244:SF410
SUPFAM:SSF117281	TMHMM:TMhelix	UniParc:UPI0008437AD2	EnsemblPlantsGene:Zm00001d003259	EnsemblPlants:Zm00001d003259_P006	EnsemblPlants:Zm00001d003259_T006
SEG:seg	:	:	:	:	:

Description

Galactose oxidase/kelch repeat superfamily protein

Coordinates

chr2:-:38105379..38121803

Molecular Weight (calculated)

81342.0 Da

IEP (calculated)

5.660

GRAVY (calculated)

-0.767

Length

710 amino acids

Sequence
(BLAST)

001: MVASRQREND RVRGLEESPE AGTVALLVLH SHLFAVFLLP FTSRRRRPTP VAQVFVGRFP AKSIRAREGM GKKQKKPGKG KEKTERKTAK GEEKRARRDS
101: RKVGEEDDIE AILRSIQKEE AKKEVHVEEN VPAPSPRSNC SLTVNPVKET ELILYGGEFY NGSKTFVYGD LYRYDVEKNE WKLVSSPNSP PPRSAHQTVA
201: WKNNIYMFGG EFTSPNQERF HHYKDFWTLD LKTNQWEQIL AKGCPSARSG HRMVLYKHKI VLFGGFYDTL REVRYYNDLH VFDLDHFKIY LYGGYFKEVS
301: SDKEKGTVHA DMWSLDPRTW EWNKVKKAGM PPGPRAGFSM CVHKKRAVLF GGVVDMEVEG MLIILLPWFV GDVIMSMFMN ELYGFQLDNH RWYPLELRKD
401: KPAKIKARNI KRKESTNDVE ANIIDDEGDE VMVDVEEAIE GQPEVNGVSN QLIKTLNITK DGSSRSIDVL SDSTAQESFL EAVKPSGRIN ACLAVGKDML
501: YLYGGMMEVK DREITLDDLY SLNLSKLDEW KCIISASESE WLEISEEEDD DDDDETDDDE NEEGDASQTD EDEEESDEDA AKNVSSAVSL LKGESKTMRR
601: KEKRARIEQI RVILGLSDSQ RTPVPGESLR DFYKRTNMYW QMAAYEHTQH TGKELRKDGF DLAETRFKEL KPILDELAVL EAEQKAEEEA SASTSSKRDT
701: KKPKQKSARR

Best Arabidopsis Sequence Match ( AT5G50310.1 )
(BLAST)

001: MGKKTKKPGK GKEKTERKTA KADEKKARRE GKKLSPEDDI DAILLNIQKE EAKKKEVHVE ENVAAPSPRS NCSLTINPLK ETELILYGGE FYNGQKTYVY
101: GDLYRYDVEK QEWKLVSSPN SPPPRSSHQA VAWKNYLYIF GGEFTSPNQE RFHHYKDFWM LDVKTNQWEQ LNLKGCPSPR SGHRMVLYKH KIIIFGGFYD
201: TLREVRYYND LYVFDLDQYK WQEIKPKPGA MWPTARSGFQ FFVYQDEIFL YGGYSKEVSS EKSSEKGIVH ADLWSLDPRT WEWNKVKKIG MPPSSRAGFS
301: VCVHKKRALL FGGVVDMEME GDVMMSLFLN ELYGFQLDNR RWYPIELRKE KSSKDKAKKT LEAKPVASNN DDEMDSTEED ESLAMIEQTD GVGSSDGISE
401: RMATNLTVDG NRSDKSKALQ GAKTRLDPQV SVSEEVVKPC GRINSCMVVG KDTLYIYGGM MEIKDKEVTL DDLYSLNLSK LDEWKCIIPT TETEWVEVSD
501: DEEGDEDDDE DDSEDEGNSE ESDDEDDDEE VEAMDVDGSV KVGVVVAMIK GQGKSLRRKE KRARIEQIRA NLGLSDSQRT PVPGETLKDF YKRTNMYWQM
601: AAYEHTQHTG KELRKDGFDL AETRYLELKP ILDELAILEA EQKAEEAEGP EASSSSRKGG IAKKKR

Arabidopsis Description

AT5g50310/MXI22_1 [Source:UniProtKB/TrEMBL;Acc:Q945N1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.