Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G50310.1 | Thale cress | nucleus | 93.36 | 92.94 |
| KRH63715 | Soybean | nucleus | 76.77 | 77.12 |
| KRH54239 | Soybean | nucleus | 75.87 | 76.21 |
| VIT_17s0000g10130.t01 | Wine grape | nucleus | 77.53 | 75.37 |
| Solyc03g111390.2.1 | Tomato | nucleus | 76.17 | 74.7 |
| PGSC0003DMT400039402 | Potato | nucleus | 76.17 | 74.7 |
| KXG26585 | Sorghum | nucleus | 69.83 | 70.36 |
| TraesCS2B01G361300.1 | Wheat | nucleus | 69.83 | 70.05 |
| TraesCS2A01G321200.1 | Wheat | nucleus | 69.68 | 69.89 |
| Os04t0483600-01 | Rice | nucleus | 69.68 | 69.79 |
| TraesCS2D01G342300.1 | Wheat | nucleus | 61.84 | 67.32 |
| CDX83165 | Canola | nucleus | 99.09 | 66.23 |
| HORVU2Hr1G083780.14 | Barley | nucleus, plastid | 66.06 | 65.67 |
| Zm00001d003259_P006 | Maize | endoplasmic reticulum, mitochondrion, nucleus, plasma membrane | 66.06 | 61.69 |
| GSMUA_Achr10P... | Banana | nucleus | 45.1 | 60.4 |
| CDY28023 | Canola | cytosol | 11.61 | 23.55 |
| CDY35957 | Canola | cytosol | 11.31 | 22.94 |
| CDY36630 | Canola | cytosol | 11.46 | 22.16 |
| CDY48738 | Canola | cytosol | 10.56 | 21.74 |
| CDY51408 | Canola | cytosol | 11.16 | 21.57 |
| CDY05697 | Canola | cytosol | 10.41 | 21.43 |
| CDX94790 | Canola | cytosol | 11.01 | 21.28 |
| CDX85317 | Canola | cytosol | 10.26 | 21.12 |
| CDX96969 | Canola | peroxisome | 10.86 | 20.99 |
| CDY08215 | Canola | cytosol | 11.01 | 20.98 |
| CDY30681 | Canola | cytosol | 11.01 | 20.98 |
| CDY64894 | Canola | cytosol, mitochondrion | 8.14 | 20.93 |
| CDY30169 | Canola | cytosol | 10.11 | 20.74 |
| CDY52048 | Canola | plastid | 10.86 | 20.51 |
| CDY49014 | Canola | cytosol | 10.56 | 20.41 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 10.71 | 20.23 |
| CDX86322 | Canola | cytosol | 10.41 | 20.06 |
| CDX75043 | Canola | cytosol | 13.12 | 19.08 |
| CDY67946 | Canola | cytosol | 9.95 | 18.8 |
| CDY42440 | Canola | mitochondrion | 13.73 | 18.8 |
| CDX83831 | Canola | nucleus | 15.08 | 18.73 |
| CDX84132 | Canola | cytosol | 13.88 | 18.59 |
| CDX96712 | Canola | mitochondrion | 14.63 | 18.51 |
| CDY49133 | Canola | mitochondrion, nucleus | 13.57 | 18.37 |
| CDX75048 | Canola | cytosol, plastid | 13.73 | 18.27 |
| CDY56199 | Canola | cytosol | 11.16 | 17.92 |
| CDY19228 | Canola | nucleus | 13.73 | 17.6 |
| CDY26745 | Canola | nucleus | 13.73 | 17.6 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 11.01 | 17.26 |
| CDY24063 | Canola | cytosol, mitochondrion | 7.39 | 17.25 |
| CDX92073 | Canola | cytosol | 11.46 | 16.1 |
| CDY03963 | Canola | cytosol | 11.31 | 16.06 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 11.16 | 15.98 |
| CDY03958 | Canola | cytosol | 11.16 | 15.88 |
| CDY20194 | Canola | cytosol | 11.16 | 15.85 |
| CDY28366 | Canola | cytosol | 11.16 | 15.85 |
| CDY11290 | Canola | cytosol | 11.76 | 15.51 |
| CDY18797 | Canola | cytosol | 15.38 | 15.32 |
| CDY58438 | Canola | cytosol | 11.61 | 15.31 |
| CDY18777 | Canola | cytosol | 15.23 | 15.19 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 15.23 | 15.17 |
| CDY40708 | Canola | cytosol | 15.23 | 15.17 |
| CDX73059 | Canola | cytosol, mitochondrion | 13.27 | 15.12 |
| CDX96521 | Canola | mitochondrion | 14.03 | 15.1 |
| CDY05568 | Canola | plastid | 14.93 | 14.84 |
| CDY13903 | Canola | mitochondrion | 15.08 | 14.84 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 14.78 | 14.63 |
| CDX92598 | Canola | mitochondrion | 15.23 | 14.43 |
| CDY27769 | Canola | cytosol | 14.48 | 14.41 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 14.48 | 14.41 |
| CDY43093 | Canola | cytosol | 1.51 | 12.35 |
| CDX75045 | Canola | cytosol | 13.42 | 10.61 |
| CDY21313 | Canola | cytosol | 14.48 | 9.68 |
| CDX90875 | Canola | cytosol | 14.48 | 9.51 |
| CDY60589 | Canola | cytosol | 11.31 | 9.47 |
| CDY43091 | Canola | cytosol | 0.9 | 5.31 |
| CDY72137 | Canola | cytosol | 1.06 | 4.55 |
| CDY65828 | Canola | cytosol | 1.66 | 3.38 |
Protein Annotations
| EnsemblPlants:CDY34042 | EnsemblPlantsGene:GSBRNA2T00055914001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:DUF4110 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | ncoils:Coil | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF410 |
| PFAM:PF13415 | PFAM:PF13418 | PFAM:PF13422 | ProteinID:CDY34042 | ProteinID:CDY34042.1 | SEG:seg |
| SUPFAM:SSF117281 | UniParc:UPI0004EAD642 | UniProt:A0A078H8Z5 | MapMan:35.2 | : | : |
Description
BnaC03g27730DBnaC03g27730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8Z5]
Coordinates
chrLK032326:-:361459..365866
Molecular Weight (calculated)
75589.6 Da
IEP (calculated)
4.714
GRAVY (calculated)
-0.847
Length
663 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKTKKAGK GKEKTERKTA KAEEKKARRE GKKLSPEDDI DAILLSIQKE EAKKKEVLVE ENVPAPSPRS NCSLTINPLK ETELILYGGE FYNGQKTYVY
101: GDLYRYDVDK QEWKLVSSPN SPPPRSSHQA VAWKNYLYIF GGEFTSPNQE RFHHYKDFWM LDVKTNQWEQ LNLKGCPSPR SGHRMVLYKH KIIIFGGFYD
201: TLREVRYYND LYVFDLDQYK WQEIKPKPGA MWPTARSGFQ FFVYQDEIFL YGGYSKEVSS EKSSEKGVVH ADLWSLDPRT WEWNKVKKIG MPPSSRAGFS
301: VCVHKKRALL FGGVVDMEME GDVMMSLFLN ELYGFQLDNR RWYPIELRKE KSSKDKAKKN LEAKPMTSND DDDDDDDDEM DSAEGESPSA MGDVAGSSDG
401: ISERMAACLT VEGSTSKALK GRLDPQVSVS EEVVKPCGRI NSCMVVGKDT LYIYGGMMEI KDKEITLDDL YSLNLSKLDE WKCIIPATET EWVEVSEDEE
501: GDEDEDEDDS EDEGDSEESD DEDDDEEVEA MDVDGSVKVG EVVAMIKGEG KALRRKEKRA RIEQIRANLG LSDSQRTPVP GETLKDFYKR TNMYWQMAAY
601: EHTQHTGKEL RKDGFDLAET RYLELKPVLD ELAILEAEQK AEETEGPEAS GTSRKGGIAK KKR
101: GDLYRYDVDK QEWKLVSSPN SPPPRSSHQA VAWKNYLYIF GGEFTSPNQE RFHHYKDFWM LDVKTNQWEQ LNLKGCPSPR SGHRMVLYKH KIIIFGGFYD
201: TLREVRYYND LYVFDLDQYK WQEIKPKPGA MWPTARSGFQ FFVYQDEIFL YGGYSKEVSS EKSSEKGVVH ADLWSLDPRT WEWNKVKKIG MPPSSRAGFS
301: VCVHKKRALL FGGVVDMEME GDVMMSLFLN ELYGFQLDNR RWYPIELRKE KSSKDKAKKN LEAKPMTSND DDDDDDDDEM DSAEGESPSA MGDVAGSSDG
401: ISERMAACLT VEGSTSKALK GRLDPQVSVS EEVVKPCGRI NSCMVVGKDT LYIYGGMMEI KDKEITLDDL YSLNLSKLDE WKCIIPATET EWVEVSEDEE
501: GDEDEDEDDS EDEGDSEESD DEDDDEEVEA MDVDGSVKVG EVVAMIKGEG KALRRKEKRA RIEQIRANLG LSDSQRTPVP GETLKDFYKR TNMYWQMAAY
601: EHTQHTGKEL RKDGFDLAET RYLELKPVLD ELAILEAEQK AEETEGPEAS GTSRKGGIAK KKR
001: MGKKTKKPGK GKEKTERKTA KADEKKARRE GKKLSPEDDI DAILLNIQKE EAKKKEVHVE ENVAAPSPRS NCSLTINPLK ETELILYGGE FYNGQKTYVY
101: GDLYRYDVEK QEWKLVSSPN SPPPRSSHQA VAWKNYLYIF GGEFTSPNQE RFHHYKDFWM LDVKTNQWEQ LNLKGCPSPR SGHRMVLYKH KIIIFGGFYD
201: TLREVRYYND LYVFDLDQYK WQEIKPKPGA MWPTARSGFQ FFVYQDEIFL YGGYSKEVSS EKSSEKGIVH ADLWSLDPRT WEWNKVKKIG MPPSSRAGFS
301: VCVHKKRALL FGGVVDMEME GDVMMSLFLN ELYGFQLDNR RWYPIELRKE KSSKDKAKKT LEAKPVASNN DDEMDSTEED ESLAMIEQTD GVGSSDGISE
401: RMATNLTVDG NRSDKSKALQ GAKTRLDPQV SVSEEVVKPC GRINSCMVVG KDTLYIYGGM MEIKDKEVTL DDLYSLNLSK LDEWKCIIPT TETEWVEVSD
501: DEEGDEDDDE DDSEDEGNSE ESDDEDDDEE VEAMDVDGSV KVGVVVAMIK GQGKSLRRKE KRARIEQIRA NLGLSDSQRT PVPGETLKDF YKRTNMYWQM
601: AAYEHTQHTG KELRKDGFDL AETRYLELKP ILDELAILEA EQKAEEAEGP EASSSSRKGG IAKKKR
101: GDLYRYDVEK QEWKLVSSPN SPPPRSSHQA VAWKNYLYIF GGEFTSPNQE RFHHYKDFWM LDVKTNQWEQ LNLKGCPSPR SGHRMVLYKH KIIIFGGFYD
201: TLREVRYYND LYVFDLDQYK WQEIKPKPGA MWPTARSGFQ FFVYQDEIFL YGGYSKEVSS EKSSEKGIVH ADLWSLDPRT WEWNKVKKIG MPPSSRAGFS
301: VCVHKKRALL FGGVVDMEME GDVMMSLFLN ELYGFQLDNR RWYPIELRKE KSSKDKAKKT LEAKPVASNN DDEMDSTEED ESLAMIEQTD GVGSSDGISE
401: RMATNLTVDG NRSDKSKALQ GAKTRLDPQV SVSEEVVKPC GRINSCMVVG KDTLYIYGGM MEIKDKEVTL DDLYSLNLSK LDEWKCIIPT TETEWVEVSD
501: DEEGDEDDDE DDSEDEGNSE ESDDEDDDEE VEAMDVDGSV KVGVVVAMIK GQGKSLRRKE KRARIEQIRA NLGLSDSQRT PVPGETLKDF YKRTNMYWQM
601: AAYEHTQHTG KELRKDGFDL AETRYLELKP ILDELAILEA EQKAEEAEGP EASSSSRKGG IAKKKR
Arabidopsis Description
AT5g50310/MXI22_1 [Source:UniProtKB/TrEMBL;Acc:Q945N1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.