Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020713.1-P | Field mustard | cytosol | 36.96 | 100.0 |
| CDY05697 | Canola | cytosol | 97.52 | 97.52 |
| CDX85317 | Canola | cytosol | 90.06 | 90.06 |
| AT5G48180.1 | Thale cress | cytosol | 84.78 | 83.74 |
| CDX86322 | Canola | cytosol | 89.13 | 83.43 |
| KRH43755 | Soybean | cytosol | 56.52 | 55.49 |
| CDY28023 | Canola | cytosol | 56.21 | 55.35 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 55.59 | 54.91 |
| CDY35957 | Canola | cytosol | 54.97 | 54.13 |
| PGSC0003DMT400046550 | Potato | cytosol | 18.94 | 53.98 |
| VIT_12s0057g01080.t01 | Wine grape | cytosol | 54.04 | 53.21 |
| Os09t0249000-01 | Rice | cytosol, plasma membrane, plastid | 53.73 | 52.11 |
| KXG34722 | Sorghum | cytosol | 53.11 | 50.74 |
| CDY30169 | Canola | cytosol | 50.31 | 50.15 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 50.31 | 49.54 |
| CDY52048 | Canola | plastid | 53.73 | 49.29 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 50.0 | 49.24 |
| TraesCS5B01G165000.1 | Wheat | mitochondrion | 50.0 | 49.24 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 53.42 | 49.0 |
| TraesCS5A01G168200.1 | Wheat | mitochondrion | 49.69 | 48.93 |
| CDY51408 | Canola | cytosol | 48.45 | 45.48 |
| CDX96969 | Canola | peroxisome | 47.83 | 44.9 |
| CDY36630 | Canola | cytosol | 47.83 | 44.9 |
| CDX94790 | Canola | cytosol | 47.2 | 44.31 |
| CDY08215 | Canola | cytosol | 47.83 | 44.25 |
| Zm00001d019221_P001 | Maize | cytosol | 52.48 | 44.24 |
| CDY49014 | Canola | cytosol | 46.89 | 44.02 |
| CDY30681 | Canola | cytosol | 45.34 | 41.95 |
| CDY64894 | Canola | cytosol, mitochondrion | 32.61 | 40.7 |
| CDY56199 | Canola | cytosol | 50.62 | 39.47 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 50.0 | 38.06 |
| CDY03958 | Canola | cytosol | 53.11 | 36.7 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 52.48 | 36.5 |
| CDY20194 | Canola | cytosol | 52.8 | 36.4 |
| CDY03963 | Canola | cytosol | 52.8 | 36.4 |
| CDY28366 | Canola | cytosol | 52.17 | 35.97 |
| CDX92073 | Canola | cytosol | 52.48 | 35.81 |
| CDY43093 | Canola | cytosol | 9.01 | 35.8 |
| CDY24063 | Canola | cytosol, mitochondrion | 29.5 | 33.45 |
| CDY60589 | Canola | cytosol | 51.24 | 20.83 |
| CDY26745 | Canola | nucleus | 25.47 | 15.86 |
| CDY19228 | Canola | nucleus | 25.47 | 15.86 |
| CDX96712 | Canola | mitochondrion | 25.78 | 15.84 |
| CDY42440 | Canola | mitochondrion | 22.98 | 15.29 |
| CDX75043 | Canola | cytosol | 21.43 | 15.13 |
| CDY49133 | Canola | mitochondrion, nucleus | 22.98 | 15.1 |
| CDX83831 | Canola | nucleus | 24.22 | 14.61 |
| CDX84132 | Canola | cytosol | 22.05 | 14.34 |
| CDX75048 | Canola | cytosol, plastid | 21.74 | 14.06 |
| CDY11290 | Canola | cytosol | 20.81 | 13.32 |
| CDY58438 | Canola | cytosol | 20.81 | 13.32 |
| CDY67946 | Canola | cytosol | 14.29 | 13.11 |
| CDX73059 | Canola | cytosol, mitochondrion | 22.98 | 12.71 |
| CDX96521 | Canola | mitochondrion | 23.29 | 12.18 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 25.16 | 12.16 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 25.16 | 12.16 |
| CDY18797 | Canola | cytosol | 25.16 | 12.16 |
| CDY27769 | Canola | cytosol | 25.16 | 12.16 |
| CDY18777 | Canola | cytosol | 24.84 | 12.03 |
| CDY40708 | Canola | cytosol | 24.53 | 11.86 |
| CDY05568 | Canola | plastid | 24.22 | 11.69 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 23.6 | 11.34 |
| CDY34042 | Canola | nucleus | 21.74 | 10.56 |
| CDY13903 | Canola | mitochondrion | 19.88 | 9.5 |
| CDX92598 | Canola | mitochondrion | 19.88 | 9.14 |
| CDX75045 | Canola | cytosol | 21.43 | 8.22 |
| CDX83165 | Canola | nucleus | 21.74 | 7.06 |
| CDY21313 | Canola | cytosol | 20.19 | 6.55 |
| CDX90875 | Canola | cytosol | 19.88 | 6.34 |
| CDY43091 | Canola | cytosol | 0.93 | 2.65 |
| CDY65828 | Canola | cytosol | 2.17 | 2.15 |
| CDY72137 | Canola | cytosol | 0.93 | 1.95 |
Protein Annotations
| EnsemblPlants:CDY48738 | EnsemblPlantsGene:GSBRNA2T00091634001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF351 | PFAM:PF01344 |
| PFAM:PF13418 | ProteinID:CDY48738 | ProteinID:CDY48738.1 | SUPFAM:SSF117281 | UniParc:UPI0004EEC376 | UniProt:A0A078IHY0 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA02g29990DBnaA02g29990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IHY0]
Coordinates
chrLK032789:-:21620..22671
Molecular Weight (calculated)
35154.5 Da
IEP (calculated)
4.998
GRAVY (calculated)
-0.304
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPVAENKWV KVGQKGSGPG PRSSHALTVV GNKVYCFGGE LKPTIHIDND LYVFDLETQE WSIAPATGDA PFPCFGVSMV PIGTTIYVYG GRDDTRRYNG
101: LYSYDTLTNK WEMLSPVEEG LPGRSYHSMA CDDRNVYVFG GVTAKGRVNT LHGYDVVGRK WVEYPAGGEA CKGRGGPGLV VVEGKVWVLF GFDGNELGDI
201: HCFDLGTCKW TAVETTGDVP PARSVFPAVR SGKEIVVYGG EEEPHELMHM GAGKLSGEVY RLDTETLVWE KVVDGTEEGK KPSPRGWCAF AVAVKDGEEG
301: LLVHGGNSPT NERLDDMVFW RF
101: LYSYDTLTNK WEMLSPVEEG LPGRSYHSMA CDDRNVYVFG GVTAKGRVNT LHGYDVVGRK WVEYPAGGEA CKGRGGPGLV VVEGKVWVLF GFDGNELGDI
201: HCFDLGTCKW TAVETTGDVP PARSVFPAVR SGKEIVVYGG EEEPHELMHM GAGKLSGEVY RLDTETLVWE KVVDGTEEGK KPSPRGWCAF AVAVKDGEEG
301: LLVHGGNSPT NERLDDMVFW RF
001: MCPVENKWLK VGQKGAGPGA RSSHAMTVVG NKVYCFGGEL KPTIHIDNDL YVFDLETQEW SIAPATGEAP FPCFGVSMVT IGSTIYVYGG RDDKRRYNGL
101: HSYDTETNEW KLLAPVEEGL PGRSYHSMAG DDRKVYVFGG VTAKGRVNTL HAYDVVDQKW VEYPAAGEAC KGRGAPGLVV VEGRIWVLFG FDGNELGDIH
201: CFDLASEQWK AVETTGDVPA ARSVFPAVSY GKYIVIYGGE EEPHELMHMG AGKMSGEVYQ LDTETLVWER IVCGNEEEKP SQRGWCAFTK AVKDGEEGLL
301: VHGGNSPTNE RLDDLVFWGF SHLNVN
101: HSYDTETNEW KLLAPVEEGL PGRSYHSMAG DDRKVYVFGG VTAKGRVNTL HAYDVVDQKW VEYPAAGEAC KGRGAPGLVV VEGRIWVLFG FDGNELGDIH
201: CFDLASEQWK AVETTGDVPA ARSVFPAVSY GKYIVIYGGE EEPHELMHMG AGKMSGEVYQ LDTETLVWER IVCGNEEEKP SQRGWCAFTK AVKDGEEGLL
301: VHGGNSPTNE RLDDLVFWGF SHLNVN
Arabidopsis Description
NSP5Nitrile-specifier protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q93XW5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.