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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 2
  • cytosol 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra029671.1-P Field mustard cytosol 66.37 61.98
Bra020713.1-P Field mustard cytosol 52.21 49.58
Solyc05g024410.2.1 Tomato cytosol, extracellular, plastid 92.92 32.21
VIT_12s0057g01080.t01 Wine grape cytosol 70.8 24.46
AT3G07720.1 Thale cress cytosol 69.91 24.01
CDY35957 Canola cytosol 69.03 23.85
CDY28023 Canola cytosol 68.14 23.55
KRH43755 Soybean cytosol 66.37 22.87
Bra022157.1-P Field mustard cytosol 24.78 22.22
TraesCS5D01G172400.1 Wheat mitochondrion 62.83 21.71
HORVU5Hr1G051310.1 Barley cytosol, mitochondrion, peroxisome 62.83 21.71
Os09t0249000-01 Rice cytosol, plasma membrane, plastid 63.72 21.69
TraesCS5A01G168200.1 Wheat mitochondrion 61.95 21.41
TraesCS5B01G165000.1 Wheat mitochondrion 61.95 21.41
KXG34722 Sorghum cytosol 61.06 20.47
CDY05697 Canola cytosol 53.98 18.94
CDY48738 Canola cytosol 53.98 18.94
CDX85317 Canola cytosol 53.98 18.94
AT5G48180.1 Thale cress cytosol 53.98 18.71
Bra037506.1-P Field mustard cytosol 53.1 18.63
Bra039702.1-P Field mustard cytosol 42.48 18.25
Zm00001d019221_P001 Maize cytosol 61.06 18.06
Bra037958.1-P Field mustard cytosol 41.59 17.87
CDY64894 Canola cytosol, mitochondrion 40.71 17.83
CDX86322 Canola cytosol 53.98 17.73
Bra021175.1-P Field mustard cytosol 38.94 16.99
CDY30169 Canola cytosol 42.48 14.86
CDY08215 Canola cytosol 45.13 14.66
CDY30681 Canola cytosol 45.13 14.66
AT1G54040.2 Thale cress cytosol 43.36 14.37
CDY36630 Canola cytosol 41.59 13.7
CDY51408 Canola cytosol 41.59 13.7
CDX96969 Canola peroxisome 40.71 13.41
CDY49014 Canola cytosol 40.71 13.41
CDY19142 Canola cytosol, peroxisome, plastid 41.59 13.39
CDY52048 Canola plastid 41.59 13.39
CDX94790 Canola cytosol 39.82 13.12
Bra022159.1-P Field mustard cytosol 28.32 12.12
CDY56199 Canola cytosol 41.59 11.38
CDY65743 Canola cytosol, peroxisome, plastid 40.71 10.87
AT2G33070.3 Thale cress cytosol 45.13 10.78
CDY28366 Canola cytosol 44.25 10.71
CDY20194 Canola cytosol 44.25 10.71
CDX92073 Canola cytosol 44.25 10.59
AT3G16390.2 Thale cress cytosol 43.36 10.49
AT3G16400.1 Thale cress cytosol 43.36 10.43
CDY56200 Canola endoplasmic reticulum, extracellular, plasma membrane 42.48 10.37
CDY03958 Canola cytosol 42.48 10.3
CDY03963 Canola cytosol 42.48 10.28
Bra040923.1-P Field mustard cytosol 42.48 9.43
AT3G16410.1 Thale cress cytosol 41.59 7.59
Bra018944.1-P Field mustard cytosol 45.13 6.44
CDY60589 Canola cytosol 44.25 6.31
PGSC0003DMT400070308 Potato cytosol 18.58 5.75
PGSC0003DMT400050172 Potato cytosol, mitochondrion, plastid 18.58 4.72
PGSC0003DMT400050298 Potato cytosol, plastid 13.27 3.99
PGSC0003DMT400007146 Potato cytosol 21.24 3.67
PGSC0003DMT400039402 Potato nucleus 20.35 3.4
PGSC0003DMT400060067 Potato cytosol 17.7 2.68
PGSC0003DMT400058372 Potato mitochondrion 7.08 2.5
CDY24063 Canola cytosol, mitochondrion 6.19 2.46
PGSC0003DMT400058369 Potato mitochondrion 1.77 0.63
PGSC0003DMT400063503 Potato extracellular 0.0 0.0
Bra018943.1-P Field mustard cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400046550EnsemblPlantsGene:PGSC0003DMG400018073Gene3D:2.120.10.80GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:Gal_Oxase/kelch_b-propellerInterPro:IPR015915InterPro:Kelch-typ_b-propellerPFAM:PF13418PGSC:PGSC0003DMG400018073SUPFAM:SSF50965
UniParc:UPI000296B4E0UniProt:M1BJ88MapMan:35.1:::
Description
Kelch repeat-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400018073]
Coordinates
chr5:-:34469019..34469360
Molecular Weight (calculated)
12323.4 Da
IEP (calculated)
4.588
GRAVY (calculated)
-0.304
Length
113 amino acids
Sequence
(BLAST)
001: MQVETNGEKP TARSVFSTVG IGKYIFIYGG EIDPSDLGHL GAGKFSGDVY ALDTDTLVWK RWMDSGDHPG PRGWCAFASG RRDGQEGMLV YGGNTPSNDR
101: LGDIFFFTPL VEI
Best Arabidopsis Sequence Match ( AT3G07720.1 )
(BLAST)
001: MAATPMEGKW VQLKQKGTGP GARSSHAIAL VGNKMYAFGG EFQPRVPVDN QLYVFDLETQ TWSIQEASGD APPPRVGVAM AAVGPIIYFF GGRDSTHQEL
101: NELYCFNTLT NQWKLLSSGE TGPQNRSYHS ITADSQNVYV FGGCGVDGRL NDLWAYNVVD QKWIKFPSPG EACRGRGGPG LEVVQGKIWV VYGFAGEEAD
201: DVHCFDIAKG EWKEVETKGE KPSARSVFST AVVGKQILIS GGEIDPSDLG HMGAGCFTGD AYGLDTETLE WRKWEDGVGS VEHPGPRGWC AFAAGSRDGK
301: QGLLVYGGNS PSNDRLDDIF FFTPNTLLK
Arabidopsis Description
AT3g07720/F17A17_6 [Source:UniProtKB/TrEMBL;Acc:Q9S7W4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.