Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G16390.2 | Thale cress | cytosol | 89.57 | 90.15 |
| CDY30169 | Canola | cytosol | 56.81 | 82.66 |
| CDY56199 | Canola | cytosol | 71.49 | 81.36 |
| AT2G33070.3 | Thale cress | cytosol | 81.28 | 80.76 |
| CDY20194 | Canola | cytosol | 80.21 | 80.73 |
| CDY28366 | Canola | cytosol | 80.0 | 80.51 |
| CDX92073 | Canola | cytosol | 80.43 | 80.08 |
| CDY03963 | Canola | cytosol | 77.66 | 78.16 |
| Bra021175.1-P | Field mustard | cytosol | 41.7 | 75.68 |
| CDY03958 | Canola | cytosol | 73.83 | 74.46 |
| AT3G16410.1 | Thale cress | cytosol | 93.4 | 70.92 |
| Bra022159.1-P | Field mustard | cytosol | 39.57 | 70.45 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 68.94 | 69.98 |
| Bra040923.1-P | Field mustard | cytosol | 72.98 | 67.39 |
| AT1G54040.2 | Thale cress | cytosol | 40.43 | 55.72 |
| AT5G48180.1 | Thale cress | cytosol | 36.38 | 52.45 |
| AT3G07720.1 | Thale cress | cytosol | 36.17 | 51.67 |
| Bra022157.1-P | Field mustard | cytosol | 13.62 | 50.79 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 35.11 | 50.61 |
| Os09t0249000-01 | Rice | cytosol, plasma membrane, plastid | 34.89 | 49.4 |
| KXG34722 | Sorghum | cytosol | 35.32 | 49.26 |
| KRH43755 | Soybean | cytosol | 33.83 | 48.48 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 33.19 | 47.71 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 33.19 | 47.71 |
| VIT_12s0057g01080.t01 | Wine grape | cytosol | 32.77 | 47.09 |
| TraesCS5A01G168200.1 | Wheat | mitochondrion | 32.77 | 47.09 |
| TraesCS5B01G165000.1 | Wheat | mitochondrion | 32.55 | 46.79 |
| Zm00001d019221_P001 | Maize | cytosol | 35.74 | 43.98 |
| PGSC0003DMT400046550 | Potato | cytosol | 10.43 | 43.36 |
| AT5G04420.3 | Thale cress | cytosol | 15.32 | 14.01 |
| AT2G36360.4 | Thale cress | cytosol | 15.11 | 13.71 |
| AT1G18610.2 | Thale cress | cytosol | 16.17 | 13.67 |
| AT1G74150.1 | Thale cress | cytosol, mitochondrion | 15.74 | 13.01 |
| AT5G27630.3 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 18.3 | 12.87 |
| AT3G05420.2 | Thale cress | cytosol | 18.3 | 12.86 |
| AT5G50310.1 | Thale cress | nucleus | 15.96 | 11.26 |
| AT5G18590.1 | Thale cress | mitochondrion | 16.38 | 10.88 |
| AT4G04670.1 | Thale cress | cytosol | 12.77 | 6.03 |
Protein Annotations
| Gene3D:2.100.10.30 | Gene3D:2.120.10.80 | PDB:5GQT | EntrezGene:820887 | MapMan:9.5.2.2 | ProteinID:AAB63638.1 |
| ProteinID:AEE75807.1 | ProteinID:AEE75808.1 | EMBL:AF214574 | EMBL:AF375399 | EMBL:AK229323 | EMBL:AK317467 |
| ArrayExpress:AT3G16400 | EnsemblPlantsGene:AT3G16400 | RefSeq:AT3G16400 | TAIR:AT3G16400 | RefSeq:AT3G16400-TAIR-G | EnsemblPlants:AT3G16400.1 |
| TAIR:AT3G16400.1 | Symbol:ATMLP-470 | EMBL:AY035036 | EMBL:AY087364 | EMBL:AY113857 | EMBL:AY125507 |
| EMBL:AY129466 | Unigene:At.22512 | ProteinID:BAB01138.1 | EMBL:BT000689 | EMBL:BT000690 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003729 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009987 |
| GO:GO:0019748 | GO:GO:0019762 | GO:GO:0030246 | GO:GO:0080027 | GO:GO:0080028 | InterPro:IPR001229 |
| InterPro:IPR015915 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | InterPro:Kelch-typ_b-propeller |
| InterPro:Kelch_1 | RefSeq:NP_001030709.1 | RefSeq:NP_566546.1 | InterPro:NSP1/2/3 | PFAM:PF01344 | PFAM:PF01419 |
| PFAM:PF13415 | PIRSF:PIRSF038118 | PO:PO:0000014 | PO:PO:0000293 | PO:PO:0007131 | PO:PO:0009025 |
| PO:PO:0020030 | PFscan:PS51752 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 | UniProt:Q9SDM9 | SMART:SM00612 |
| SMART:SM00915 | SUPFAM:SSF117281 | SUPFAM:SSF51101 | UniParc:UPI00000AC462 | : | : |
Description
NSP1Nitrile-specifier protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDM9]
Coordinates
chr3:+:5566083..5568545
Molecular Weight (calculated)
51672.7 Da
IEP (calculated)
5.219
GRAVY (calculated)
-0.305
Length
470 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQKLEAKGG EMGDVWDDGV YENVRKVYVG QAQYGIAFVK FEYVNGSQVV VGDEHGKKTE LGVEEFEIDA DDYIVYVEGY REKVNDMTSE MITFLSIKTF
101: KGKTSHPIEK RPGVKFVLHG GKIVGFHGRS TDVLHSLGAY VSLSSTIKLL GKWIKVEQKG EGPGLRCSHG IAQVGNKIYS FGGEFTPNQP IDKHLYVFDL
201: ETRTWSISPA TGDVPHLSCL GVRMVSVGST LYVFGGRDAS RQYNGFYSFD TTTNEWKLLT PVEEGPTPRS FHSMAADEEN VYVFGGVSAT ARLNTLDSYN
301: IVDKKWFHCS TPGDSLTARG GAGLEVVQGK VWVVYGFNGC EVDDVHYYDP VQDKWTQVET FGVRPSERSV FASAAIGKHI VIFGGEIAMD PLAHVGPGQL
401: TDGTFALDTE TLQWERLDKF GGEEETPSSR GWTASTTATI DGKKGLVMHG GKAPTNDRFD DLFFYGIDSA
101: KGKTSHPIEK RPGVKFVLHG GKIVGFHGRS TDVLHSLGAY VSLSSTIKLL GKWIKVEQKG EGPGLRCSHG IAQVGNKIYS FGGEFTPNQP IDKHLYVFDL
201: ETRTWSISPA TGDVPHLSCL GVRMVSVGST LYVFGGRDAS RQYNGFYSFD TTTNEWKLLT PVEEGPTPRS FHSMAADEEN VYVFGGVSAT ARLNTLDSYN
301: IVDKKWFHCS TPGDSLTARG GAGLEVVQGK VWVVYGFNGC EVDDVHYYDP VQDKWTQVET FGVRPSERSV FASAAIGKHI VIFGGEIAMD PLAHVGPGQL
401: TDGTFALDTE TLQWERLDKF GGEEETPSSR GWTASTTATI DGKKGLVMHG GKAPTNDRFD DLFFYGIDSA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.