Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 91.63 | 92.22 |
| CDY03963 | Canola | cytosol | 87.55 | 87.37 |
| CDY43093 | Canola | cytosol | 13.95 | 80.25 |
| CDX92073 | Canola | cytosol | 80.47 | 79.45 |
| CDY72137 | Canola | cytosol | 25.97 | 78.57 |
| CDY20194 | Canola | cytosol | 78.54 | 78.37 |
| CDY30169 | Canola | cytosol | 54.08 | 78.02 |
| CDY28366 | Canola | cytosol | 78.11 | 77.94 |
| CDY56199 | Canola | cytosol | 68.03 | 76.76 |
| CDY43091 | Canola | cytosol | 18.03 | 74.34 |
| AT3G16400.1 | Thale cress | cytosol | 74.46 | 73.83 |
| AT3G16390.2 | Thale cress | cytosol | 72.32 | 72.16 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 46.78 | 62.11 |
| CDY52048 | Canola | plastid | 46.57 | 61.82 |
| CDY08215 | Canola | cytosol | 41.63 | 55.75 |
| CDY51408 | Canola | cytosol | 40.56 | 55.1 |
| AT3G16410.1 | Thale cress | cytosol | 73.18 | 55.09 |
| CDY36630 | Canola | cytosol | 39.91 | 54.23 |
| CDY30681 | Canola | cytosol | 39.7 | 53.16 |
| CDY48738 | Canola | cytosol | 36.7 | 53.11 |
| CDX85317 | Canola | cytosol | 36.7 | 53.11 |
| CDY05697 | Canola | cytosol | 36.48 | 52.8 |
| CDX96969 | Canola | peroxisome | 38.84 | 52.77 |
| CDX94790 | Canola | cytosol | 38.63 | 52.48 |
| CDY64894 | Canola | cytosol, mitochondrion | 28.97 | 52.33 |
| CDY49014 | Canola | cytosol | 38.41 | 52.19 |
| CDX86322 | Canola | cytosol | 36.91 | 50.0 |
| CDY35957 | Canola | cytosol | 34.98 | 49.85 |
| CDY28023 | Canola | cytosol | 34.98 | 49.85 |
| Os09t0249000-01 | Rice | cytosol, plasma membrane, plastid | 34.55 | 48.49 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 33.69 | 48.16 |
| KRH43755 | Soybean | cytosol | 33.26 | 47.26 |
| KXG34722 | Sorghum | cytosol | 34.12 | 47.18 |
| VIT_12s0057g01080.t01 | Wine grape | cytosol | 32.83 | 46.79 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 32.19 | 45.87 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 41.42 | 45.63 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 31.97 | 45.57 |
| TraesCS5B01G165000.1 | Wheat | mitochondrion | 31.55 | 44.95 |
| TraesCS5A01G168200.1 | Wheat | mitochondrion | 31.55 | 44.95 |
| Zm00001d019221_P001 | Maize | cytosol | 35.84 | 43.72 |
| CDY24063 | Canola | cytosol, mitochondrion | 26.61 | 43.66 |
| PGSC0003DMT400046550 | Potato | cytosol | 10.3 | 42.48 |
| CDY60589 | Canola | cytosol | 56.44 | 33.21 |
| CDY67946 | Canola | cytosol | 12.23 | 16.24 |
| CDY65828 | Canola | cytosol | 11.16 | 16.0 |
| CDX75043 | Canola | cytosol | 15.02 | 15.35 |
| CDX96712 | Canola | mitochondrion | 17.17 | 15.27 |
| CDY26745 | Canola | nucleus | 16.74 | 15.09 |
| CDY19228 | Canola | nucleus | 16.74 | 15.09 |
| CDY49133 | Canola | mitochondrion, nucleus | 15.67 | 14.9 |
| CDY42440 | Canola | mitochondrion | 15.45 | 14.88 |
| CDX83831 | Canola | nucleus | 16.52 | 14.42 |
| CDX84132 | Canola | cytosol | 15.24 | 14.34 |
| CDX75048 | Canola | cytosol, plastid | 15.24 | 14.26 |
| CDY11290 | Canola | cytosol | 14.59 | 13.52 |
| CDY58438 | Canola | cytosol | 14.38 | 13.32 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 18.03 | 12.61 |
| CDY27769 | Canola | cytosol | 18.03 | 12.61 |
| CDX73059 | Canola | cytosol, mitochondrion | 15.24 | 12.2 |
| CDY18777 | Canola | cytosol | 17.38 | 12.18 |
| CDY18797 | Canola | cytosol | 17.38 | 12.16 |
| CDY05568 | Canola | plastid | 17.38 | 12.14 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 17.38 | 12.09 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 17.17 | 12.01 |
| CDY40708 | Canola | cytosol | 16.95 | 11.86 |
| CDX96521 | Canola | mitochondrion | 15.45 | 11.69 |
| CDY13903 | Canola | mitochondrion | 16.31 | 11.28 |
| CDY34042 | Canola | nucleus | 15.88 | 11.16 |
| CDX92598 | Canola | mitochondrion | 16.31 | 10.86 |
| CDX75045 | Canola | cytosol | 15.02 | 8.34 |
| CDX83165 | Canola | nucleus | 15.88 | 7.46 |
| CDY21313 | Canola | cytosol | 14.16 | 6.65 |
| CDX90875 | Canola | cytosol | 14.16 | 6.54 |
Protein Annotations
| Gene3D:2.100.10.30 | Gene3D:2.120.10.80 | MapMan:9.5.2.2 | EnsemblPlants:CDY03958 | ProteinID:CDY03958 | ProteinID:CDY03958.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0030246 | EnsemblPlantsGene:GSBRNA2T00117475001 | InterPro:IPR001229 |
| InterPro:IPR015915 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | InterPro:Kelch-typ_b-propeller |
| InterPro:Kelch_1 | PFAM:PF01344 | PFAM:PF01419 | PFAM:PF13415 | PFscan:PS51752 | PANTHER:PTHR23244 |
| PANTHER:PTHR23244:SF208 | SMART:SM00612 | SMART:SM00915 | SUPFAM:SSF117281 | SUPFAM:SSF51101 | UniParc:UPI0004EED28A |
| SEG:seg | : | : | : | : | : |
Description
BnaC07g11830D
Coordinates
chrLK031947:+:1069124..1071145
Molecular Weight (calculated)
51469.7 Da
IEP (calculated)
5.800
GRAVY (calculated)
-0.367
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQKLDAKGG KQGNAWDDGV HDNVRKVYLG KGPDCIAFVK FEYVDGSKVV IGDEHGEKTQ EVEEFVVDVD DYIVYVEAFR ETATQETIVD LKFETCKGKT
101: NKHFTTSPGV KFVLQGGKIV GFHGRSTNVL HALGAYVSDP ISTFQLHGKW TKVEQKGKAP GLRCSHAIAQ VGNKIYSFGG EFTPNVPIDK DLYVFDLKTG
201: KWSIAPATGD IPHLSCLGVR MVSVGTTLYV FGGRDAVRKY NAFYSYDTTK NVWKLLTPLE EGPTPRSFHS MAADDKNVYV FGGVSSTTRV KTLDVYNIAD
301: RKWKPCATPG EDFSIRGGSG LEVVNGKVWV VYGFNNYEID DIYCYDPVGD KWTQVETTGE QPSGRSVFAS AVVGKHIVIF GGEVDMDPEA HVGPGQLMDG
401: TFALDTETLK WERLDKIGEE KEETPEIRGW TASTSATISG KKGLLMHGGK AQTNDRFDDL FFYEFQ
101: NKHFTTSPGV KFVLQGGKIV GFHGRSTNVL HALGAYVSDP ISTFQLHGKW TKVEQKGKAP GLRCSHAIAQ VGNKIYSFGG EFTPNVPIDK DLYVFDLKTG
201: KWSIAPATGD IPHLSCLGVR MVSVGTTLYV FGGRDAVRKY NAFYSYDTTK NVWKLLTPLE EGPTPRSFHS MAADDKNVYV FGGVSSTTRV KTLDVYNIAD
301: RKWKPCATPG EDFSIRGGSG LEVVNGKVWV VYGFNNYEID DIYCYDPVGD KWTQVETTGE QPSGRSVFAS AVVGKHIVIF GGEVDMDPEA HVGPGQLMDG
401: TFALDTETLK WERLDKIGEE KEETPEIRGW TASTSATISG KKGLLMHGGK AQTNDRFDDL FFYEFQ
001: MAQKLEAKGG EMGDVWDDGV YENVRKVYVG QAQYGIAFVK FEYVNGSQVV VGDEHGKKTE LGVEEFEIDA DDYIVYVEGY REKVNDMTSE MITFLSIKTF
101: KGKTSHPIEK RPGVKFVLHG GKIVGFHGRS TDVLHSLGAY VSLSSTIKLL GKWIKVEQKG EGPGLRCSHG IAQVGNKIYS FGGEFTPNQP IDKHLYVFDL
201: ETRTWSISPA TGDVPHLSCL GVRMVSVGST LYVFGGRDAS RQYNGFYSFD TTTNEWKLLT PVEEGPTPRS FHSMAADEEN VYVFGGVSAT ARLNTLDSYN
301: IVDKKWFHCS TPGDSLTARG GAGLEVVQGK VWVVYGFNGC EVDDVHYYDP VQDKWTQVET FGVRPSERSV FASAAIGKHI VIFGGEIAMD PLAHVGPGQL
401: TDGTFALDTE TLQWERLDKF GGEEETPSSR GWTASTTATI DGKKGLVMHG GKAPTNDRFD DLFFYGIDSA
101: KGKTSHPIEK RPGVKFVLHG GKIVGFHGRS TDVLHSLGAY VSLSSTIKLL GKWIKVEQKG EGPGLRCSHG IAQVGNKIYS FGGEFTPNQP IDKHLYVFDL
201: ETRTWSISPA TGDVPHLSCL GVRMVSVGST LYVFGGRDAS RQYNGFYSFD TTTNEWKLLT PVEEGPTPRS FHSMAADEEN VYVFGGVSAT ARLNTLDSYN
301: IVDKKWFHCS TPGDSLTARG GAGLEVVQGK VWVVYGFNGC EVDDVHYYDP VQDKWTQVET FGVRPSERSV FASAAIGKHI VIFGGEIAMD PLAHVGPGQL
401: TDGTFALDTE TLQWERLDKF GGEEETPSSR GWTASTTATI DGKKGLVMHG GKAPTNDRFD DLFFYGIDSA
Arabidopsis Description
NSP1Nitrile-specifier protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDM9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.