Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005805.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY58438 | Canola | cytosol | 97.02 | 97.02 |
| AT5G04420.3 | Thale cress | cytosol | 88.27 | 86.38 |
| VIT_13s0019g05290.t01 | Wine grape | cytosol | 64.81 | 64.17 |
| PGSC0003DMT400070308 | Potato | cytosol | 46.12 | 63.56 |
| Solyc11g007960.1.1 | Tomato | cytosol | 59.84 | 61.18 |
| KRG92113 | Soybean | cytosol | 43.94 | 60.22 |
| KRH34674 | Soybean | cytosol | 60.04 | 59.92 |
| KRG92111 | Soybean | cytosol | 16.1 | 59.12 |
| Os02t0822800-01 | Rice | cytosol | 50.5 | 48.94 |
| TraesCS6B01G450700.1 | Wheat | cytosol | 50.7 | 48.11 |
| HORVU6Hr1G093000.5 | Barley | cytosol | 50.7 | 47.75 |
| TraesCS6D01G389800.2 | Wheat | cytosol | 50.5 | 47.48 |
| GSMUA_Achr9P23600_001 | Banana | cytosol | 51.49 | 46.09 |
| OQU85983 | Sorghum | cytosol | 47.91 | 46.08 |
| TraesCS6A01G406400.1 | Wheat | cytosol | 51.09 | 44.62 |
| Zm00001d051876_P002 | Maize | nucleus | 47.32 | 40.07 |
| CDY18777 | Canola | cytosol | 42.94 | 32.48 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 42.94 | 32.43 |
| CDY18797 | Canola | cytosol | 42.94 | 32.43 |
| CDY27769 | Canola | cytosol | 42.54 | 32.13 |
| CDY40708 | Canola | cytosol | 42.35 | 31.98 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 42.35 | 31.98 |
| CDY05568 | Canola | plastid | 41.35 | 31.18 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 40.95 | 30.75 |
| CDY28023 | Canola | cytosol | 13.92 | 21.41 |
| CDY36630 | Canola | cytosol | 14.51 | 21.28 |
| CDY35957 | Canola | cytosol | 13.72 | 21.1 |
| CDY51408 | Canola | cytosol | 14.31 | 20.99 |
| CDX94790 | Canola | cytosol | 14.31 | 20.99 |
| CDY43093 | Canola | cytosol | 3.38 | 20.99 |
| CDY48738 | Canola | cytosol | 13.32 | 20.81 |
| CDY49014 | Canola | cytosol | 14.12 | 20.7 |
| CDX96969 | Canola | peroxisome | 14.12 | 20.7 |
| CDY42440 | Canola | mitochondrion | 19.88 | 20.66 |
| CDY49133 | Canola | mitochondrion, nucleus | 20.08 | 20.61 |
| CDY05697 | Canola | cytosol | 13.12 | 20.5 |
| CDY13903 | Canola | mitochondrion | 27.44 | 20.47 |
| CDY08215 | Canola | cytosol | 14.12 | 20.4 |
| CDX85317 | Canola | cytosol | 12.92 | 20.19 |
| CDY30169 | Canola | cytosol | 12.92 | 20.12 |
| CDY52048 | Canola | plastid | 13.92 | 19.94 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 13.92 | 19.94 |
| CDX92598 | Canola | mitochondrion | 27.63 | 19.86 |
| CDY30681 | Canola | cytosol | 13.32 | 19.25 |
| CDX86322 | Canola | cytosol | 13.12 | 19.19 |
| CDX96712 | Canola | mitochondrion | 19.88 | 19.08 |
| CDY26745 | Canola | nucleus | 19.09 | 18.57 |
| CDY19228 | Canola | nucleus | 18.69 | 18.18 |
| CDX83831 | Canola | nucleus | 19.09 | 17.98 |
| CDX73059 | Canola | cytosol, mitochondrion | 20.68 | 17.87 |
| CDY64894 | Canola | cytosol, mitochondrion | 9.15 | 17.83 |
| CDY24063 | Canola | cytosol, mitochondrion | 9.74 | 17.25 |
| CDY67946 | Canola | cytosol | 11.93 | 17.09 |
| CDX96521 | Canola | mitochondrion | 20.68 | 16.88 |
| CDX75043 | Canola | cytosol | 14.71 | 16.23 |
| CDY56199 | Canola | cytosol | 13.32 | 16.22 |
| CDX75048 | Canola | cytosol, plastid | 15.51 | 15.66 |
| CDX84132 | Canola | cytosol | 15.31 | 15.56 |
| CDY28366 | Canola | cytosol | 14.31 | 15.42 |
| CDY20194 | Canola | cytosol | 14.31 | 15.42 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 12.72 | 15.13 |
| CDX92073 | Canola | cytosol | 13.92 | 14.83 |
| CDY03958 | Canola | cytosol | 13.52 | 14.59 |
| CDY03963 | Canola | cytosol | 13.32 | 14.35 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 13.12 | 14.25 |
| CDY34042 | Canola | nucleus | 15.51 | 11.76 |
| CDX75045 | Canola | cytosol | 15.51 | 9.3 |
| CDY60589 | Canola | cytosol | 13.92 | 8.84 |
| CDY21313 | Canola | cytosol | 15.71 | 7.96 |
| CDX90875 | Canola | cytosol | 15.51 | 7.73 |
| CDX83165 | Canola | nucleus | 15.11 | 7.66 |
| CDY65828 | Canola | cytosol | 0.99 | 1.54 |
| CDY43091 | Canola | cytosol | 0.2 | 0.88 |
| CDY72137 | Canola | cytosol | 0.2 | 0.65 |
Protein Annotations
| EnsemblPlants:CDY11290 | EnsemblPlantsGene:GSBRNA2T00049323001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:Gal_Oxase/kelch_b-propeller | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | ncoils:Coil | PANTHER:PTHR23244 |
| PANTHER:PTHR23244:SF336 | PFAM:PF01344 | PFAM:PF13418 | ProteinID:CDY11290 | ProteinID:CDY11290.1 | SEG:seg |
| SUPFAM:SSF50965 | SUPFAM:SSF90257 | UniParc:UPI000253FBA1 | UniProt:A0A078FA30 | MapMan:35.1 | : |
Description
BnaA03g01260DBnaA03g01260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FA30]
Coordinates
chrLK032010:-:591607..594238
Molecular Weight (calculated)
55106.7 Da
IEP (calculated)
5.829
GRAVY (calculated)
-0.365
Length
503 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEIRKEIDV GDWHSNLPHD EWTPLTVPGS RASARYKHAA VAVDEKLYIV GGSRNGRYLS DVQVFDLRSL TWDSFKLITG DGDGSLGEAF PAISDHRMIK
101: WGNRLLLIGG YSKNQSDNMS VRFIDLETHL CGVVDASGNV PVSRGGHSIT LVGSRVFVFG GEDKKRRLLN DLHVLDLETM TWDVVETSQT RPVPRFDHTA
201: ATHSDRYLLI FGGCSHSIFF NDLHILDLQT MEWSQPHVQG DDVTPRAGHA GITIDENWFI VGGGDNSTGC LETLVLNMSK LVWSTSTHVG ARHPLASEGL
301: SVCSASVFGE NILVAFGGYN GKYNNDIFVM RLKPGEPSSH PKIFKSPAAA AAAASVTAAY AIAKSDSSDF PPPPANPTLN GTGNSFSGSN IRNTIDSIKE
401: EKRTLESSVA ETQVENSKLR EKIDEVNSTH AELSQELQSV QGQLISERSR CFKLEAQIAE LQKALESGQS IEAEVEMLRK QKLAADERED GTVKKQGWGW
501: GAR
101: WGNRLLLIGG YSKNQSDNMS VRFIDLETHL CGVVDASGNV PVSRGGHSIT LVGSRVFVFG GEDKKRRLLN DLHVLDLETM TWDVVETSQT RPVPRFDHTA
201: ATHSDRYLLI FGGCSHSIFF NDLHILDLQT MEWSQPHVQG DDVTPRAGHA GITIDENWFI VGGGDNSTGC LETLVLNMSK LVWSTSTHVG ARHPLASEGL
301: SVCSASVFGE NILVAFGGYN GKYNNDIFVM RLKPGEPSSH PKIFKSPAAA AAAASVTAAY AIAKSDSSDF PPPPANPTLN GTGNSFSGSN IRNTIDSIKE
401: EKRTLESSVA ETQVENSKLR EKIDEVNSTH AELSQELQSV QGQLISERSR CFKLEAQIAE LQKALESGQS IEAEVEMLRK QKLAADERED GTVKKQGWGW
501: GAR
001: MEEIRKEIDV GDWHSNLAHD EWTPLPVSGS RASARYKHAA VVVDEKLYIV GGSRNGRYLS DVQVFDLRSL TWSSLKLKTE SSSADNIQED DGSSLREAFP
101: AISDHRMIKW GNKLLLIGGH SKKSSDNMLV RFIDLETHSC GVIDVFGNVP ASRGGHSITL VGSRVLVFGG EDKNRRLLND LHVLHLETMT WDVVETKQTR
201: PVPRFDHTAA THSDRYLLIF GGCSHSIFYS DLHILDLQTM EWSQPHVQGD VVTPRAGHAG ITIDENWYIV GGGDNSTGCL ETLVLNMSKL VWSTSTHVEA
301: RHPLASEGLS VCSASVFGEN ILVAFGGYNG KYNNDIFVMR LKPGESSHPK IFKSPAAAAA AASVTAAYAI AKSDKSDYPP PANPTLNGNG NSLPERDIRN
401: RIDTIKEEKR ALESSIAETQ VENAKLREKI DEVNSSHTEL SQELQSVEGQ LISERSRCFK LEAQIAELQK ALESGQSIEA EVEMLRRQRS ASDEEEDGTV
501: QRQGSAGVWG LFGR
101: AISDHRMIKW GNKLLLIGGH SKKSSDNMLV RFIDLETHSC GVIDVFGNVP ASRGGHSITL VGSRVLVFGG EDKNRRLLND LHVLHLETMT WDVVETKQTR
201: PVPRFDHTAA THSDRYLLIF GGCSHSIFYS DLHILDLQTM EWSQPHVQGD VVTPRAGHAG ITIDENWYIV GGGDNSTGCL ETLVLNMSKL VWSTSTHVEA
301: RHPLASEGLS VCSASVFGEN ILVAFGGYNG KYNNDIFVMR LKPGESSHPK IFKSPAAAAA AASVTAAYAI AKSDKSDYPP PANPTLNGNG NSLPERDIRN
401: RIDTIKEEKR ALESSIAETQ VENAKLREKI DEVNSSHTEL SQELQSVEGQ LISERSRCFK LEAQIAELQK ALESGQSIEA EVEMLRRQRS ASDEEEDGTV
501: QRQGSAGVWG LFGR
Arabidopsis Description
AT5G04420 protein [Source:UniProtKB/TrEMBL;Acc:Q9LZ83]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.