Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037958.1-P | Field mustard | cytosol | 75.22 | 98.1 |
| CDY51408 | Canola | cytosol | 96.21 | 96.21 |
| CDX96969 | Canola | peroxisome | 86.01 | 86.01 |
| CDX94790 | Canola | cytosol | 84.84 | 84.84 |
| CDY49014 | Canola | cytosol | 84.55 | 84.55 |
| CDY08215 | Canola | cytosol | 85.42 | 84.2 |
| CDY30681 | Canola | cytosol | 82.51 | 81.32 |
| AT1G54040.2 | Thale cress | cytosol | 76.68 | 77.13 |
| CDY64894 | Canola | cytosol, mitochondrion | 51.6 | 68.6 |
| CDY43093 | Canola | cytosol | 13.12 | 55.56 |
| CDY30169 | Canola | cytosol | 52.19 | 55.42 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 55.1 | 53.85 |
| CDY52048 | Canola | plastid | 54.52 | 53.28 |
| CDY24063 | Canola | cytosol, mitochondrion | 43.44 | 52.46 |
| CDX85317 | Canola | cytosol | 45.77 | 48.76 |
| CDY48738 | Canola | cytosol | 44.9 | 47.83 |
| CDY28023 | Canola | cytosol | 45.48 | 47.71 |
| CDY35957 | Canola | cytosol | 45.48 | 47.71 |
| CDY05697 | Canola | cytosol | 44.61 | 47.52 |
| Os09t0249000-01 | Rice | cytosol, plasma membrane, plastid | 44.31 | 45.78 |
| KXG34722 | Sorghum | cytosol | 44.31 | 45.1 |
| CDX86322 | Canola | cytosol | 45.19 | 45.06 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 42.57 | 44.79 |
| VIT_12s0057g01080.t01 | Wine grape | cytosol | 42.27 | 44.34 |
| CDY56199 | Canola | cytosol | 53.35 | 44.31 |
| KRH43755 | Soybean | cytosol | 42.27 | 44.21 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 41.11 | 43.12 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 41.11 | 43.12 |
| TraesCS5A01G168200.1 | Wheat | mitochondrion | 40.52 | 42.51 |
| TraesCS5B01G165000.1 | Wheat | mitochondrion | 40.23 | 42.2 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 51.9 | 42.08 |
| PGSC0003DMT400046550 | Potato | cytosol | 13.7 | 41.59 |
| CDY20194 | Canola | cytosol | 56.27 | 41.33 |
| CDY28366 | Canola | cytosol | 55.69 | 40.9 |
| CDY03963 | Canola | cytosol | 55.1 | 40.47 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 54.52 | 40.39 |
| CDX92073 | Canola | cytosol | 55.1 | 40.04 |
| CDY03958 | Canola | cytosol | 54.23 | 39.91 |
| Zm00001d019221_P001 | Maize | cytosol | 43.73 | 39.27 |
| CDY60589 | Canola | cytosol | 54.23 | 23.48 |
| CDY19228 | Canola | nucleus | 24.2 | 16.05 |
| CDY26745 | Canola | nucleus | 23.91 | 15.86 |
| CDY67946 | Canola | cytosol | 15.74 | 15.38 |
| CDX75043 | Canola | cytosol | 20.41 | 15.35 |
| CDY42440 | Canola | mitochondrion | 21.57 | 15.29 |
| CDY49133 | Canola | mitochondrion, nucleus | 21.57 | 15.1 |
| CDX96712 | Canola | mitochondrion | 22.74 | 14.89 |
| CDY58438 | Canola | cytosol | 21.57 | 14.71 |
| CDY11290 | Canola | cytosol | 21.28 | 14.51 |
| CDX83831 | Canola | nucleus | 22.45 | 14.42 |
| CDX84132 | Canola | cytosol | 20.7 | 14.34 |
| CDX75048 | Canola | cytosol, plastid | 20.41 | 14.06 |
| CDX73059 | Canola | cytosol, mitochondrion | 21.87 | 12.89 |
| CDX96521 | Canola | mitochondrion | 22.16 | 12.34 |
| CDY27769 | Canola | cytosol | 22.74 | 11.71 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 22.74 | 11.71 |
| CDY18797 | Canola | cytosol | 22.74 | 11.71 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 22.74 | 11.71 |
| CDY18777 | Canola | cytosol | 22.45 | 11.58 |
| CDY05568 | Canola | plastid | 22.45 | 11.54 |
| CDY34042 | Canola | nucleus | 22.16 | 11.46 |
| CDY40708 | Canola | cytosol | 22.16 | 11.41 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 21.87 | 11.19 |
| CDY13903 | Canola | mitochondrion | 20.41 | 10.39 |
| CDX92598 | Canola | mitochondrion | 20.41 | 10.0 |
| CDX75045 | Canola | cytosol | 20.41 | 8.34 |
| CDX83165 | Canola | nucleus | 21.87 | 7.56 |
| CDY21313 | Canola | cytosol | 15.74 | 5.44 |
| CDY43091 | Canola | cytosol | 1.75 | 5.31 |
| CDX90875 | Canola | cytosol | 15.45 | 5.25 |
| CDY72137 | Canola | cytosol | 1.46 | 3.25 |
| CDY65828 | Canola | cytosol | 2.33 | 2.46 |
Protein Annotations
| EnsemblPlants:CDY36630 | EnsemblPlantsGene:GSBRNA2T00062364001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF351 | PFAM:PF01344 |
| PFAM:PF13964 | ProteinID:CDY36630 | ProteinID:CDY36630.1 | SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI000051DD79 |
| UniProt:R4HEW0 | MapMan:9.5.2.3 | : | : | : | : |
Description
BnaC06g06830DBnaC06g06830D protein [Source:UniProtKB/TrEMBL;Acc:R4HEW0]
Coordinates
chrLK032379:-:369159..370692
Molecular Weight (calculated)
37747.0 Da
IEP (calculated)
5.933
GRAVY (calculated)
-0.558
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSVQGEWI KVEQKGGQTP GPRSSHGIAV VGDKLYSFGG ELTPNISIDK DLYVFDFNTH TWSISPSKGV APDVKALGTR MVSVGTKLYL FGGRDENKKF
101: DDFYSYDTVT NEWTKLTILD QEGGPEARTY HSMASDENHV YVFGGVSKGG TNKTPFRFRT IEAYNIADGK WSQLPDPGEQ FPRFERRGGA GFVVVQGKIW
201: VVYGFATSPD PNGKNDYESD QVQFYDPATQ KWTEVETKGD KPSARSVFGH AVVGKYILIF GGETWPDPKA HLGPGTLSDE GFALDTETLV WERFGGGAEP
301: GQLGWPGYTT ATVYGKKGLL MHGGKRPTNN RTDELYFYAV NSA
101: DDFYSYDTVT NEWTKLTILD QEGGPEARTY HSMASDENHV YVFGGVSKGG TNKTPFRFRT IEAYNIADGK WSQLPDPGEQ FPRFERRGGA GFVVVQGKIW
201: VVYGFATSPD PNGKNDYESD QVQFYDPATQ KWTEVETKGD KPSARSVFGH AVVGKYILIF GGETWPDPKA HLGPGTLSDE GFALDTETLV WERFGGGAEP
301: GQLGWPGYTT ATVYGKKGLL MHGGKRPTNN RTDELYFYAV NSA
001: MAPTLQGQWI KVGQKGGTGP GPRSSHGIAA VGDKLYSFGG ELTPNKHIDK DLYVFDFNTQ TWSIAQPKGD APTVSCLGVR MVAVGTKIYI FGGRDENRNF
101: ENFRSYDTVT SEWTFLTKLD EVGGPEARTF HSMASDENHV YVFGGVSKGG TMNTPTRFRT IEAYNIADGK WAQLPDPGDN FEKRGGAGFA VVQGKIWVVY
201: GFATSIVPGG KDDYESNAVQ FYDPASKKWT EVETTGAKPS ARSVFAHAVV GKYIIIFAGE VWPDLNGHYG PGTLSNEGYA LDTETLVWEK LGEEGAPAIP
301: RGWTAYTAAT VDGKNGLLMH GGKLPTNERT DDLYFYAVNS A
101: ENFRSYDTVT SEWTFLTKLD EVGGPEARTF HSMASDENHV YVFGGVSKGG TMNTPTRFRT IEAYNIADGK WAQLPDPGDN FEKRGGAGFA VVQGKIWVVY
201: GFATSIVPGG KDDYESNAVQ FYDPASKKWT EVETTGAKPS ARSVFAHAVV GKYIIIFAGE VWPDLNGHYG PGTLSNEGYA LDTETLVWEK LGEEGAPAIP
301: RGWTAYTAAT VDGKNGLLMH GGKLPTNERT DDLYFYAVNS A
Arabidopsis Description
ESPEpithiospecifier protein [Source:UniProtKB/Swiss-Prot;Acc:Q8RY71]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.