Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52048 | Canola | plastid | 99.15 | 99.15 |
| CDY30169 | Canola | cytosol | 59.54 | 64.71 |
| CDY43093 | Canola | cytosol | 13.68 | 59.26 |
| CDX96969 | Canola | peroxisome | 55.56 | 56.85 |
| CDY51408 | Canola | cytosol | 54.7 | 55.98 |
| CDX94790 | Canola | cytosol | 54.13 | 55.39 |
| CDY36630 | Canola | cytosol | 53.85 | 55.1 |
| CDY08215 | Canola | cytosol | 54.42 | 54.89 |
| CDY49014 | Canola | cytosol | 53.56 | 54.81 |
| CDX85317 | Canola | cytosol | 49.57 | 54.04 |
| CDY05697 | Canola | cytosol | 49.57 | 54.04 |
| CDY64894 | Canola | cytosol, mitochondrion | 39.32 | 53.49 |
| CDY48738 | Canola | cytosol | 49.0 | 53.42 |
| CDY30681 | Canola | cytosol | 51.85 | 52.3 |
| CDY35957 | Canola | cytosol | 48.43 | 51.99 |
| CDX86322 | Canola | cytosol | 50.43 | 51.45 |
| CDY28023 | Canola | cytosol | 47.86 | 51.38 |
| CDY56199 | Canola | cytosol | 60.4 | 51.33 |
| VIT_12s0057g01080.t01 | Wine grape | cytosol | 46.44 | 49.85 |
| KRH43755 | Soybean | cytosol | 46.44 | 49.7 |
| CDY03963 | Canola | cytosol | 64.67 | 48.61 |
| Os09t0249000-01 | Rice | cytosol, plasma membrane, plastid | 45.87 | 48.49 |
| CDY20194 | Canola | cytosol | 64.1 | 48.18 |
| CDX92073 | Canola | cytosol | 64.39 | 47.88 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 44.44 | 47.85 |
| KXG34722 | Sorghum | cytosol | 45.87 | 47.77 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 57.55 | 47.75 |
| CDY28366 | Canola | cytosol | 63.25 | 47.54 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 43.59 | 46.79 |
| CDY03958 | Canola | cytosol | 62.11 | 46.78 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 61.54 | 46.65 |
| TraesCS5B01G165000.1 | Wheat | mitochondrion | 43.3 | 46.48 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 43.3 | 46.48 |
| TraesCS5A01G168200.1 | Wheat | mitochondrion | 43.02 | 46.18 |
| Zm00001d019221_P001 | Maize | cytosol | 46.44 | 42.67 |
| PGSC0003DMT400046550 | Potato | cytosol | 13.39 | 41.59 |
| CDY24063 | Canola | cytosol, mitochondrion | 32.76 | 40.49 |
| CDY60589 | Canola | cytosol | 62.11 | 27.53 |
| CDY49133 | Canola | mitochondrion, nucleus | 22.79 | 16.33 |
| CDY42440 | Canola | mitochondrion | 22.51 | 16.32 |
| CDY19228 | Canola | nucleus | 23.65 | 16.05 |
| CDY26745 | Canola | nucleus | 23.36 | 15.86 |
| CDX96712 | Canola | mitochondrion | 22.79 | 15.27 |
| CDX83831 | Canola | nucleus | 22.51 | 14.79 |
| CDX75043 | Canola | cytosol | 18.8 | 14.47 |
| CDY67946 | Canola | cytosol | 13.96 | 13.96 |
| CDY58438 | Canola | cytosol | 19.94 | 13.92 |
| CDY11290 | Canola | cytosol | 19.94 | 13.92 |
| CDX73059 | Canola | cytosol, mitochondrion | 22.79 | 13.75 |
| CDX84132 | Canola | cytosol | 19.09 | 13.54 |
| CDX75048 | Canola | cytosol, plastid | 19.09 | 13.45 |
| CDX96521 | Canola | mitochondrion | 22.79 | 12.99 |
| CDY05568 | Canola | plastid | 22.79 | 11.99 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 22.79 | 11.94 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 22.51 | 11.86 |
| CDY27769 | Canola | cytosol | 22.51 | 11.86 |
| CDY18777 | Canola | cytosol | 22.22 | 11.73 |
| CDY18797 | Canola | cytosol | 22.22 | 11.71 |
| CDY13903 | Canola | mitochondrion | 22.22 | 11.57 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 21.94 | 11.56 |
| CDY40708 | Canola | cytosol | 21.65 | 11.41 |
| CDX92598 | Canola | mitochondrion | 22.22 | 11.14 |
| CDY34042 | Canola | nucleus | 20.23 | 10.71 |
| CDY43091 | Canola | cytosol | 3.13 | 9.73 |
| CDX75045 | Canola | cytosol | 18.8 | 7.87 |
| CDY72137 | Canola | cytosol | 3.13 | 7.14 |
| CDX83165 | Canola | nucleus | 19.94 | 7.06 |
| CDY21313 | Canola | cytosol | 18.23 | 6.45 |
| CDX90875 | Canola | cytosol | 17.95 | 6.24 |
| CDY65828 | Canola | cytosol | 3.7 | 4.0 |
Protein Annotations
| EnsemblPlants:CDY19142 | EnsemblPlantsGene:GSBRNA2T00006426001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:Gal_Oxase/kelch_b-propeller | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF351 |
| PFAM:PF01344 | PFAM:PF13415 | ProteinID:CDY19142 | ProteinID:CDY19142.1 | SUPFAM:SSF50965 | UniParc:UPI0004EF082D |
| UniProt:A0A078G2B4 | MapMan:9.5.2.2 | : | : | : | : |
Description
BnaA04g18820DBnaA04g18820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G2B4]
Coordinates
chrLK032092:+:485471..487935
Molecular Weight (calculated)
37991.1 Da
IEP (calculated)
5.672
GRAVY (calculated)
-0.163
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MNIAGIVPTL QEAIAPTFHG EWIKVEQKGK GPGPRSSHAI AVVGDKLYSF GGELTSNVPV DKDLYVFDLN THTWSVAPAT GDIPTLSCLG VAMVAVGSTL
101: YVFGGRDASR KYNGFYSYDT VKNEWKLVTG VEEGPEARSF HSMASDAENV YLFGGVSKTV RLKTLNAFNV SDEKWVQLPT PGDSCKERGG AGLVVVQGKV
201: WVFYGFYGDE CDDVHCFDVD RNVWTKVETT GEKPSPRSVF AIAAVGKHVI VVGGEIEMDP QAHVGPGKLC GKGFVLDTET LEWKKLEDGG GEAPTEPRGW
301: CASTAATING KKGMLMFGGK AQTNNRFDDL YFYSVKELNP LINVRVGLGL F
101: YVFGGRDASR KYNGFYSYDT VKNEWKLVTG VEEGPEARSF HSMASDAENV YLFGGVSKTV RLKTLNAFNV SDEKWVQLPT PGDSCKERGG AGLVVVQGKV
201: WVFYGFYGDE CDDVHCFDVD RNVWTKVETT GEKPSPRSVF AIAAVGKHVI VVGGEIEMDP QAHVGPGKLC GKGFVLDTET LEWKKLEDGG GEAPTEPRGW
301: CASTAATING KKGMLMFGGK AQTNNRFDDL YFYSVKELNP LINVRVGLGL F
001: MVQKVEARGG EIGDVWDDGA YDGVRKVYVG QGEDGIAFVK FEYVNGSQEV VGDERGKKTL LGAEEFEVDP DDYIVYVEGY HEKVFGVTTK EIISTLTFKT
101: YKGKTSPPFG IVSGTKFVLQ GGKIVGFHGR STDVLHSLGA YISSPATPKL RGKWIKVEQK GEGPGPRCSH DIAQVGNKIF SFGGELTPNQ PIDKHLYVFD
201: LETRTWSISP ATGDVPNLSC LGVRMVSIGS SLYVFGGRDA SRKYNGFYSF DTTKNEWKLL TPVEQGPTPR SFHSMTADEN NVYVFGGVSA TVRLKTLDAY
301: NIVDHKWVQC STPGGSCSVR GGAGLEVVQG KVWVVYGFNG CEVDDVHCYD PAQDKWTQVE TFGEKPCARS VFASAVVGKH ILVFGGEIAM DPKAHEGPGQ
401: LSGGTFALDT ETLKWEKLDK LGEEEETPSI RGWSASTTGT IDGKKGLVMF GGKAQTNDRF GDLFFYGVDS A
101: YKGKTSPPFG IVSGTKFVLQ GGKIVGFHGR STDVLHSLGA YISSPATPKL RGKWIKVEQK GEGPGPRCSH DIAQVGNKIF SFGGELTPNQ PIDKHLYVFD
201: LETRTWSISP ATGDVPNLSC LGVRMVSIGS SLYVFGGRDA SRKYNGFYSF DTTKNEWKLL TPVEQGPTPR SFHSMTADEN NVYVFGGVSA TVRLKTLDAY
301: NIVDHKWVQC STPGGSCSVR GGAGLEVVQG KVWVVYGFNG CEVDDVHCYD PAQDKWTQVE TFGEKPCARS VFASAVVGKH ILVFGGEIAM DPKAHEGPGQ
401: LSGGTFALDT ETLKWEKLDK LGEEEETPSI RGWSASTTGT IDGKKGLVMF GGKAQTNDRF GDLFFYGVDS A
Arabidopsis Description
NSP2nitrile specifier protein 2 [Source:TAIR;Acc:AT2G33070]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.