Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11290 | Canola | cytosol | 97.02 | 97.02 |
| AT5G04420.3 | Thale cress | cytosol | 88.47 | 86.58 |
| VIT_13s0019g05290.t01 | Wine grape | cytosol | 65.21 | 64.57 |
| PGSC0003DMT400070308 | Potato | cytosol | 45.73 | 63.01 |
| Solyc11g007960.1.1 | Tomato | cytosol | 59.84 | 61.18 |
| KRG92111 | Soybean | cytosol | 16.5 | 60.58 |
| KRG92113 | Soybean | cytosol | 43.74 | 59.95 |
| KRH34674 | Soybean | cytosol | 60.04 | 59.92 |
| Os02t0822800-01 | Rice | cytosol | 49.9 | 48.36 |
| TraesCS6B01G450700.1 | Wheat | cytosol | 50.7 | 48.11 |
| HORVU6Hr1G093000.5 | Barley | cytosol | 50.5 | 47.57 |
| TraesCS6D01G389800.2 | Wheat | cytosol | 50.5 | 47.48 |
| GSMUA_Achr9P23600_001 | Banana | cytosol | 51.29 | 45.91 |
| OQU85983 | Sorghum | cytosol | 47.51 | 45.7 |
| TraesCS6A01G406400.1 | Wheat | cytosol | 51.09 | 44.62 |
| Zm00001d051876_P002 | Maize | nucleus | 47.32 | 40.07 |
| CDY18777 | Canola | cytosol | 43.14 | 32.63 |
| CDY18797 | Canola | cytosol | 43.14 | 32.58 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 43.14 | 32.58 |
| CDY27769 | Canola | cytosol | 42.74 | 32.28 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 42.54 | 32.13 |
| CDY40708 | Canola | cytosol | 42.15 | 31.83 |
| CDY05568 | Canola | plastid | 41.35 | 31.18 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 40.95 | 30.75 |
| CDY36630 | Canola | cytosol | 14.71 | 21.57 |
| CDY28023 | Canola | cytosol | 13.92 | 21.41 |
| CDX94790 | Canola | cytosol | 14.51 | 21.28 |
| CDY51408 | Canola | cytosol | 14.51 | 21.28 |
| CDY35957 | Canola | cytosol | 13.72 | 21.1 |
| CDX96969 | Canola | peroxisome | 14.31 | 20.99 |
| CDY43093 | Canola | cytosol | 3.38 | 20.99 |
| CDY48738 | Canola | cytosol | 13.32 | 20.81 |
| CDY49014 | Canola | cytosol | 14.12 | 20.7 |
| CDY08215 | Canola | cytosol | 14.31 | 20.69 |
| CDY05697 | Canola | cytosol | 13.12 | 20.5 |
| CDY42440 | Canola | mitochondrion | 19.68 | 20.45 |
| CDY13903 | Canola | mitochondrion | 27.24 | 20.33 |
| CDY49133 | Canola | mitochondrion, nucleus | 19.68 | 20.2 |
| CDX85317 | Canola | cytosol | 12.92 | 20.19 |
| CDX92598 | Canola | mitochondrion | 27.83 | 20.0 |
| CDY19142 | Canola | cytosol, peroxisome, plastid | 13.92 | 19.94 |
| CDY52048 | Canola | plastid | 13.92 | 19.94 |
| CDY30169 | Canola | cytosol | 12.72 | 19.81 |
| CDY30681 | Canola | cytosol | 13.52 | 19.54 |
| CDX96712 | Canola | mitochondrion | 20.08 | 19.27 |
| CDX86322 | Canola | cytosol | 13.12 | 19.19 |
| CDY26745 | Canola | nucleus | 19.09 | 18.57 |
| CDY64894 | Canola | cytosol, mitochondrion | 9.34 | 18.22 |
| CDY19228 | Canola | nucleus | 18.69 | 18.18 |
| CDX83831 | Canola | nucleus | 19.09 | 17.98 |
| CDY24063 | Canola | cytosol, mitochondrion | 9.94 | 17.61 |
| CDX73059 | Canola | cytosol, mitochondrion | 20.28 | 17.53 |
| CDY67946 | Canola | cytosol | 11.93 | 17.09 |
| CDX96521 | Canola | mitochondrion | 20.28 | 16.56 |
| CDX75043 | Canola | cytosol | 14.71 | 16.23 |
| CDY56199 | Canola | cytosol | 13.12 | 15.98 |
| CDX75048 | Canola | cytosol, plastid | 15.51 | 15.66 |
| CDX84132 | Canola | cytosol | 15.31 | 15.56 |
| CDY20194 | Canola | cytosol | 14.12 | 15.2 |
| CDY28366 | Canola | cytosol | 14.12 | 15.2 |
| CDY65743 | Canola | cytosol, peroxisome, plastid | 12.72 | 15.13 |
| CDX92073 | Canola | cytosol | 13.72 | 14.62 |
| CDY03958 | Canola | cytosol | 13.32 | 14.38 |
| CDY03963 | Canola | cytosol | 13.12 | 14.13 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 12.92 | 14.04 |
| CDY34042 | Canola | nucleus | 15.31 | 11.61 |
| CDX75045 | Canola | cytosol | 15.51 | 9.3 |
| CDY60589 | Canola | cytosol | 13.92 | 8.84 |
| CDY21313 | Canola | cytosol | 15.71 | 7.96 |
| CDX90875 | Canola | cytosol | 15.51 | 7.73 |
| CDX83165 | Canola | nucleus | 14.91 | 7.56 |
| CDY65828 | Canola | cytosol | 0.99 | 1.54 |
| CDY43091 | Canola | cytosol | 0.2 | 0.88 |
| CDY72137 | Canola | cytosol | 0.2 | 0.65 |
Protein Annotations
| EnsemblPlants:CDY58438 | EnsemblPlantsGene:GSBRNA2T00023615001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:Gal_Oxase/kelch_b-propeller | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | ncoils:Coil | PANTHER:PTHR23244 |
| PANTHER:PTHR23244:SF336 | PFAM:PF01344 | PFAM:PF13418 | ProteinID:CDY58438 | ProteinID:CDY58438.1 | SEG:seg |
| SUPFAM:SSF50965 | SUPFAM:SSF90257 | UniParc:UPI0004EF3DE4 | UniProt:A0A078J5V6 | MapMan:35.1 | : |
Description
BnaC03g71230DBnaC03g71230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5V6]
Coordinates
chrLK033668:-:32599..35608
Molecular Weight (calculated)
55166.8 Da
IEP (calculated)
6.064
GRAVY (calculated)
-0.397
Length
503 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEIRKEIDV GDWHSNLPHD EWTQLTVPGS RASARYKHAA VVVDEKLCIV GGSRNGRYLS DVQVFDLRSL TWDSLKLKTE DGDGSLGEAF PAISDHRMIK
101: WGNKLLLIGG YSKNQSNNMS VRFIDLETHL CGVVEASGNV PVSRGGHSIT LVGSRVFVFG GEDKKRRLLN DLHVLDLETM TWDVVETSQT RPVPRFDHTA
201: ATHSNRYLLI FGGCSHSIFF NDLHILDLQT MEWSQPHVQG DDVTPRAGHA GITIDENWYI VGGGDNSTGC LETLVLNMSK LVWSTSTHVG ARHPLASEGL
301: SVCSASVFGE NILVAFGGYN GKYNNDIFAM RLKPGESSSH PKIFKSPAAA AAAASVTAAY AIAKSDSSDF PPPPANPTLN GTGNSFSGSN IRNTIDSIKE
401: EKRTLESSVA ETQVENSKLR EKIDEVNSTH AELSQELQSV QGQLISERSR CFKLEAQIAE LQKALESGQS IEAEVEMLRK QKLASDERED GTVKKQGWGW
501: GTR
101: WGNKLLLIGG YSKNQSNNMS VRFIDLETHL CGVVEASGNV PVSRGGHSIT LVGSRVFVFG GEDKKRRLLN DLHVLDLETM TWDVVETSQT RPVPRFDHTA
201: ATHSNRYLLI FGGCSHSIFF NDLHILDLQT MEWSQPHVQG DDVTPRAGHA GITIDENWYI VGGGDNSTGC LETLVLNMSK LVWSTSTHVG ARHPLASEGL
301: SVCSASVFGE NILVAFGGYN GKYNNDIFAM RLKPGESSSH PKIFKSPAAA AAAASVTAAY AIAKSDSSDF PPPPANPTLN GTGNSFSGSN IRNTIDSIKE
401: EKRTLESSVA ETQVENSKLR EKIDEVNSTH AELSQELQSV QGQLISERSR CFKLEAQIAE LQKALESGQS IEAEVEMLRK QKLASDERED GTVKKQGWGW
501: GTR
001: MEEIRKEIDV GDWHSNLAHD EWTPLPVSGS RASARYKHAA VVVDEKLYIV GGSRNGRYLS DVQVFDLRSL TWSSLKLKTE SSSADNIQED DGSSLREAFP
101: AISDHRMIKW GNKLLLIGGH SKKSSDNMLV RFIDLETHSC GVIDVFGNVP ASRGGHSITL VGSRVLVFGG EDKNRRLLND LHVLHLETMT WDVVETKQTR
201: PVPRFDHTAA THSDRYLLIF GGCSHSIFYS DLHILDLQTM EWSQPHVQGD VVTPRAGHAG ITIDENWYIV GGGDNSTGCL ETLVLNMSKL VWSTSTHVEA
301: RHPLASEGLS VCSASVFGEN ILVAFGGYNG KYNNDIFVMR LKPGESSHPK IFKSPAAAAA AASVTAAYAI AKSDKSDYPP PANPTLNGNG NSLPERDIRN
401: RIDTIKEEKR ALESSIAETQ VENAKLREKI DEVNSSHTEL SQELQSVEGQ LISERSRCFK LEAQIAELQK ALESGQSIEA EVEMLRRQRS ASDEEEDGTV
501: QRQGSAGVWG LFGR
101: AISDHRMIKW GNKLLLIGGH SKKSSDNMLV RFIDLETHSC GVIDVFGNVP ASRGGHSITL VGSRVLVFGG EDKNRRLLND LHVLHLETMT WDVVETKQTR
201: PVPRFDHTAA THSDRYLLIF GGCSHSIFYS DLHILDLQTM EWSQPHVQGD VVTPRAGHAG ITIDENWYIV GGGDNSTGCL ETLVLNMSKL VWSTSTHVEA
301: RHPLASEGLS VCSASVFGEN ILVAFGGYNG KYNNDIFVMR LKPGESSHPK IFKSPAAAAA AASVTAAYAI AKSDKSDYPP PANPTLNGNG NSLPERDIRN
401: RIDTIKEEKR ALESSIAETQ VENAKLREKI DEVNSSHTEL SQELQSVEGQ LISERSRCFK LEAQIAELQK ALESGQSIEA EVEMLRRQRS ASDEEEDGTV
501: QRQGSAGVWG LFGR
Arabidopsis Description
AT5G04420 protein [Source:UniProtKB/TrEMBL;Acc:Q9LZ83]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.