CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34674	Soybean	cytosol	94.82	69.05
VIT_13s0019g05290.t01	Wine grape	cytosol	67.3	48.62
Solyc11g007960.1.1	Tomato	cytosol	61.58	45.94
PGSC0003DMT400070308	Potato	cytosol	43.87	44.11
Bra005805.1-P	Field mustard	cytosol	60.22	43.94
CDY11290	Canola	cytosol	60.22	43.94
CDY58438	Canola	cytosol	59.95	43.74
AT5G04420.3	Thale cress	cytosol	59.4	42.41
TraesCS6B01G450700.1	Wheat	cytosol	54.5	37.74
Os02t0822800-01	Rice	cytosol	53.13	37.57
TraesCS6D01G389800.2	Wheat	cytosol	53.68	36.82
HORVU6Hr1G093000.5	Barley	cytosol	53.41	36.7
OQU85983	Sorghum	cytosol	52.04	36.52
GSMUA_Achr9P23600_001	Banana	cytosol	53.95	35.23
TraesCS6A01G406400.1	Wheat	cytosol	54.22	34.55
Zm00001d051876_P002	Maize	nucleus	50.68	31.31
KRG96823	Soybean	cytosol, plastid	42.78	24.19
KRH68531	Soybean	nucleus	42.51	23.71
KRG92884	Soybean	nucleus	41.42	23.07
KRH02216	Soybean	mitochondrion	28.07	14.55
KRH11220	Soybean	mitochondrion	28.34	14.48
KRH21038	Soybean	mitochondrion	27.25	14.08
KRG92046	Soybean	cytosol	18.8	13.86
KRH50909	Soybean	nucleus	27.25	13.76
KRH43755	Soybean	cytosol	11.99	13.41
KRG90521	Soybean	peroxisome	20.71	12.04
KRH33805	Soybean	nucleus	20.44	11.89
KRH68432	Soybean	cytosol, nucleus, plastid	20.44	11.83
KRH56785	Soybean	nucleus	19.07	11.11
KRH03160	Soybean	cytosol	18.8	11.02
KRH63188	Soybean	cytosol	17.44	10.44
KRH54725	Soybean	cytosol	17.44	10.44
KRH02069	Soybean	cytosol	17.17	10.23
KRH63715	Soybean	nucleus	17.98	10.0
KRG96716	Soybean	endoplasmic reticulum, nucleus, plasma membrane	19.35	9.9
KRH54239	Soybean	nucleus	17.71	9.85
KRH51088	Soybean	cytosol	19.35	6.6
KRG92111	Soybean	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02012730	EnsemblPlants:KRG92113	EnsemblPlantsGene:GLYMA_20G1919001	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	ncoils:Coil	PANTHER:PTHR23244	PANTHER:PTHR23244:SF336
PFAM:PF13415	ProteinID:KRG92113	ProteinID:KRG92113.1	ProteinID:KRG92114.1	ProteinID:KRG92115.1	ProteinID:KRG92116.1
SEG:seg	SUPFAM:SSF117281	UniParc:UPI0006EE0246	UniProt:A0A0R0ELY7	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr20:+:43063882..43067641

Molecular Weight (calculated)

40473.1 Da

IEP (calculated)

5.003

GRAVY (calculated)

-0.312

Length

367 amino acids

Sequence
(BLAST)

001: VARVGQSASL FGSRVILFGG EEMSRKLLND VHVLDLESMT WEMIKTTQTP PAPRYDHSAA IQGERYLLIF GGCSHSIFFN DLHLLDMQTM EWSQPQTQGD
101: LVSPRAGHTG ITIDESWLIV GGGDNRSGCP ETLVLDMSKL VWSVLTVVKQ KDPLSSEGLS VCSATIGGEK YLLAFGGYNG RYSNEVFVMR PKAKDTMRPK
201: IFQSPAAAAA AASVTSAYAL SKSEKLDFMQ LDDINSKLSV NGHHKDDVVD KVEAIKEEKR LLELSIAEVR AENSKLGGEI EEINNTHAEL TKELQSVQGQ
301: LVAERSRCFN LEAKIAELQK LLESMQSVEE EVQALREKKS ALDQEMELAA TAESKSSGWR WFGGSEK

Best Arabidopsis Sequence Match ( AT5G04420.1 )
(BLAST)

001: MEEIRKEIDV GDWHSNLAHD EWTPLPVSGS RASARYKHAA VVVDEKLYIV GGSRNGRYLS DVQVFDLRSL TWSSLKLKTE SSSADNIQED DGSSLREAFP
101: AISDHRMIKW GNKLLLIGGH SKKSSDNMLV RFIDLETHSC GVIDVFGNVP ASRGGHSITL VGSRVLVFGG EDKNRRLLND LHVLHLETMT WDVVETKQTR
201: PVPRFDHTAA THSDRYLLIF GGCSHSIFYS DLHILDLQTM EWSQPHVQGD VVTPRAGHAG ITIDENWYIV GGGDNSTGCL ETLVLNMSKL VWSTSTHVEA
301: RHPLASEGLS VCSASVFGEN ILVAFGGYNG KYNNDIFVMR LKPGESSHPK IFKSPAAAAA AASVTAAYAI AKSDKSDYPP PANPTLNGNG NSLPERDIRN
401: RIDTIKEEKR ALESSIAETQ VENAKLREKI DEVNSSHTEL SQELQSVEGQ LISERSRCFK LEAQIAELQK ALESGQSIEA EVEMLRRQRS ASDEEEDGTV
501: QRQGSAGVWG LFGR

Arabidopsis Description

AT5G04420 protein [Source:UniProtKB/TrEMBL;Acc:Q9LZ83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.