Factsheet for Zm00001d051876_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU85983	Sorghum	cytosol	80.81	91.78
Os02t0822800-01	Rice	cytosol	70.03	80.15
TraesCS6B01G450700.1	Wheat	cytosol	69.53	77.92
TraesCS6D01G389800.2	Wheat	cytosol	69.87	77.57
HORVU6Hr1G093000.5	Barley	cytosol	68.86	76.59
TraesCS6A01G406400.1	Wheat	cytosol	70.37	72.57
PGSC0003DMT400070308	Potato	cytosol	33.33	54.25
GSMUA_Achr9P23600_001	Banana	cytosol	51.18	54.09
VIT_13s0019g05290.t01	Wine grape	cytosol	44.44	51.97
KRG92113	Soybean	cytosol	31.31	50.68
Solyc11g007960.1.1	Tomato	cytosol	41.92	50.61
Bra005805.1-P	Field mustard	cytosol	40.07	47.32
CDY58438	Canola	cytosol	40.07	47.32
CDY11290	Canola	cytosol	40.07	47.32
KRH34674	Soybean	cytosol	39.9	47.02
AT5G04420.3	Thale cress	cytosol	40.4	46.69
KRG92111	Soybean	cytosol	9.09	39.42
Zm00001d041692_P001	Maize	nucleus	31.48	34.44
Zm00001d034758_P003	Maize	plastid	34.34	29.96
Zm00001d046434_P003	Maize	plastid	29.8	29.06
Zm00001d012892_P002	Maize	plastid	34.01	25.8
Zm00001d048718_P010	Maize	mitochondrion	22.05	18.85
Zm00001d034759_P001	Maize	cytosol	15.82	18.8
Zm00001d019221_P001	Maize	cytosol	11.62	18.06
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	22.22	17.25
Zm00001d037558_P001	Maize	cytosol	3.03	14.88
Zm00001d009123_P001	Maize	cytosol	15.49	14.72
Zm00001d040606_P001	Maize	cytosol	14.98	14.35
Zm00001d031492_P001	Maize	cytosol	3.37	13.99
Zm00001d038406_P001	Maize	cytosol	4.71	12.84
Zm00001d003259_P006	Maize	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	12.12	10.14
Zm00001d021624_P002	Maize	mitochondrion	14.65	8.03

Protein Annotations

EntrezGene:100277414	Gene3D:2.120.10.80	MapMan:35.1	UniProt:A0A1D6QAL1	ProteinID:AQK55358.1	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
InterPro:Kelch_2	PFAM:PF01344	PFAM:PF07646	PFAM:PF13418	PANTHER:PTHR23244	PANTHER:PTHR23244:SF336
SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF57997	UniParc:UPI0008455B24	EnsemblPlantsGene:Zm00001d051876	EnsemblPlants:Zm00001d051876_P002
EnsemblPlants:Zm00001d051876_T002	SEG:seg	:	:	:	:

Description

Galactose oxidase/kelch repeat superfamily protein

Coordinates

chr4:+:173192603..173199615

Molecular Weight (calculated)

64697.7 Da

IEP (calculated)

7.282

GRAVY (calculated)

-0.227

Length

594 amino acids

Sequence
(BLAST)

001: MGKGISGDAR LAAAPYDQWV LLSPAGGSPR PPARYKHAAQ VVQDKLYVVG GSRNGRSLSD VQVFDFKTSS WSALSPARGS KHPNHENDAT GGSFPALAGH
101: SMVKWKNYLL AVAGSTRSSS SLNKVSVWLI DVQANSWSAV ETYGKTARDG QSVSILGSRL LMFGGEDNKR RLLNDLHILD LETMMWEEVK SEKGGPAPRY
201: DHSAAVYADQ YLLIFGGSSH STCFNDLYLL DLQTLEWSQP DAQGAHITPR SGHAGAMIDE NWYIVGGGDN ASGSTDTVVI NASKFVWSVV TSVSARDPLA
301: CEGLTLCSTT VDGEKVLIAF GGYNGKYSNE ILDSFFWDCL RICGQLERSS LLQIFVLKSK PRNLVQPRLL QSAAAAAAAA SVTAAYAVIT ATDEKTRDIV
401: ATDDFDIKRA QPASNSKKFV AEIDVLNGEN GKLAARLAEV RDENSKLKDK LDMTNLSYGE LAKELKSVQD QLAAEGSRCQ KLESQIAAAR KRLESAGSLE
501: NELEVLHQHI SQVEETIATT QRRKSGGVWK WVAGSTEVDK QLPNRKRKRR ICYSFEAACL LPVAGCFLKV LLMVDLENMS PEIILFIFFG GGTW

Best Arabidopsis Sequence Match ( AT3G05420.1 )
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP

Arabidopsis Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.