Factsheet for Zm00001d023868_P004

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, vacuole

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid, vacuole
Any Predictor:	cytosol, mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG23613	Sorghum	mitochondrion	80.26	88.73
Os12t0538800-01	Rice	mitochondrion, nucleus	67.32	73.78
TraesCS5B01G100500.1	Wheat	mitochondrion	64.97	72.45
TraesCS5D01G106700.1	Wheat	mitochondrion	64.58	72.01
TraesCS5A01G094400.1	Wheat	mitochondrion	64.18	71.47
HORVU5Hr1G025430.25	Barley	mitochondrion	61.05	66.81
Zm00001d048718_P010	Maize	mitochondrion	58.82	64.75
PGSC0003DMT400058372	Potato	mitochondrion	22.35	53.44
GSMUA_Achr3P23920_001	Banana	mitochondrion	47.45	51.05
Solyc01g067480.2.1	Tomato	mitochondrion	43.27	50.38
VIT_05s0020g01740.t01	Wine grape	mitochondrion	47.06	50.21
KRH02216	Soybean	mitochondrion	45.62	49.29
PGSC0003DMT400050298	Potato	cytosol, plastid	24.18	49.2
KRH21038	Soybean	mitochondrion	44.58	48.03
KRH11220	Soybean	mitochondrion	44.97	47.91
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	44.31	47.61
KRH50909	Soybean	nucleus	44.44	46.77
CDY13903	Canola	mitochondrion	41.05	46.59
Bra002170.1-P	Field mustard	mitochondrion	41.05	44.86
CDX92598	Canola	mitochondrion	40.91	44.71
AT5G18590.1	Thale cress	mitochondrion	40.91	44.21
PGSC0003DMT400058369	Potato	mitochondrion	15.95	38.73
Zm00001d041692_P001	Maize	nucleus	18.3	25.78
Zm00001d034758_P003	Maize	plastid	20.91	23.49
Zm00001d051876_P002	Maize	nucleus	17.25	22.22
Zm00001d046434_P003	Maize	plastid	17.65	22.17
Zm00001d012892_P002	Maize	plastid	21.05	20.56
Zm00001d034759_P001	Maize	cytosol	12.94	19.8
Zm00001d019221_P001	Maize	cytosol	8.76	17.54
Zm00001d040606_P001	Maize	cytosol	12.94	15.97
Zm00001d009123_P001	Maize	cytosol	12.29	15.04
Zm00001d031492_P001	Maize	cytosol	2.75	14.69
Zm00001d003259_P006	Maize	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	12.03	12.96
Zm00001d038406_P001	Maize	cytosol	3.66	12.84
Zm00001d037558_P001	Maize	cytosol	1.96	12.4
Zm00001d021624_P002	Maize	mitochondrion	12.55	8.86

Protein Annotations

EnsemblPlants:Zm00001d023868_P004	EnsemblPlants:Zm00001d023868_T004	EnsemblPlantsGene:Zm00001d023868	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	ncoils:Coil	PANTHER:PTHR23244
PANTHER:PTHR23244:SF414	PFAM:PF13418	ProteinID:AQK40297.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF117281
SUPFAM:SSF50965	UniParc:UPI000843CBFF	UniProt:A0A1D6IWK2	MapMan:35.1	:	:

Description

Galactose oxidase/kelch repeat superfamily protein

Coordinates

chr10:-:25595490..25600235

Molecular Weight (calculated)

85307.6 Da

IEP (calculated)

7.756

GRAVY (calculated)

-0.331

Length

765 amino acids

Sequence
(BLAST)

001: MSCPAFFFLL FFFRSKGDPS DPLNSSRSSV GPSKHLSLPN GNDATMTSVS GHADDLSYRC SSDTFDPQGR TFDISENWTV LSTEGDKPIP RFYHAAAIVS
101: SKMVVFGGDS GNRLLDDTKV WSLLFPYICC LDLDCCLSFG CFGMNFTYSI NVFLLEAGYV MLLWKIVCWT LCLTYLHFDI IQNSKYYKSM IYHSKKAMIV
201: HDDGLFVCTA LLLEKYLYMC DVQVPWGNSV ILVGGKTEPA SDHLSVWTFN TETELWSLIE AKGDIPAARS GHTVIRAGAT LILFGGEDTK GKKRHDLHMF
301: DLKSSTWLPL NYKGTGPSPR SNHIATLYDD RVLLIFGGHS KSKTLNDLYS LDFDTMVWSR VKTHGPHPSP RAGCSGTLCG TKWYIAGGAS KKKRHAETWV
401: FDVLQCKWSV CVVPPSSSIT TKKGFSMVPF YHKDKIALIA FGGNKKEPCN KVEVLVVLQN EHSFSWRSAP EVDTMVYEYS PSNKELADHL HKCAPLYSNS
501: SIARHSLTSV IEHPPRREPL SESLLKQSSL GTSLHTQLDH AEECSLGQKL QKPIDDDRYD DVDDSSSCQD STPKGPYSKR TGPGFQNGAE NMVTGGSKVR
601: RIARCSSDVG QSHLYNTKIA DLIRRNTTLE DQLATALASK DQLDKSLASV IHSRGQLEKM LANKDKEAEM LKEKIACLEL AQEESNSLSN TVHADNVRLE
701: REVAFLKAVT GETQKARKLD ELHSTRRVLA GEQSRAFQLQ VEVFHLKQRL QILEGRSGTP NKQPL

Best Arabidopsis Sequence Match ( AT5G18590.1 )
(BLAST)

001: MFSFSKRRMR LGRVKKVQLS DSVQGYKSPL RVTKRADSSS NEAAVAATSY SDELDFQPSS GNSENWMVLS VNGEKPAPRF NHAAATIGNK MIVVGGESGS
101: GLLDDVQVLN FDSCTWSTAS SKVYLSPSSL PLMIPAWKGH CLVSWGKKVL LVGGKTDPSS DRVSVWAFDT DSECWSLMDA KGDLPVSRSG HTVVRASSVL
201: ILFGGEDSKK RKLNDLHMFD LKSSTWLPLN CTGTRPCARS HHVATLFDDK ILFVFGGSGK NKTLNDLYSL DFETMVWSRI KIRGFHPSPR AGSCGVLCGT
301: KWYITGGGSR KKRHAETLVF DILKVEWSVA SISSQSSVTS NKGFSLVLLQ HKDKDFLVAF GGTKKDPSNQ VDAFTIDKNK SESPTHPQTT SKKNPGRLLF
401: GKRSSSSAVL TSDESVKASS QRLIDSVARQ KLASAIEEHG GSGRRSLSEI AFGDHRNPPS GNVSLRKQFS TEEEYRAVIE PAKCSEEDIS VPPPTTDDNT
501: GGAKITAEKT LSMVSDREIL SLQKQCSETY PLENVDGALI FQEMDNINFA GSASSSSVYQ FHEAKMTALI RRNGILEGQL EAALAGREAA ERNVSVALRS
601: KQETDKKLSD AMRDVELLKE KLTGLELAQE EANSLSNMVH SDNVRLEHDV AFLKAVLDDT QKELHSTRGV LAGERARAFQ LQVEVFHLKQ RLQSLENRAA
701: TPRKPFHV

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WWX4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.