Factsheet for Bra002170.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92598	Canola	mitochondrion	99.14	99.14
CDY13903	Canola	mitochondrion	93.14	96.74
AT5G18590.1	Thale cress	mitochondrion	91.14	90.11
PGSC0003DMT400058372	Potato	mitochondrion	32.14	70.31
Solyc01g067480.2.1	Tomato	mitochondrion	61.57	65.6
VIT_05s0020g01740.t01	Wine grape	mitochondrion	65.29	63.74
KRH02216	Soybean	mitochondrion	63.86	63.14
KRH50909	Soybean	nucleus	63.43	61.07
KRH11220	Soybean	mitochondrion	61.86	60.31
KRH21038	Soybean	mitochondrion	60.71	59.86
PGSC0003DMT400050298	Potato	cytosol, plastid	31.29	58.24
GSMUA_Achr3P23920_001	Banana	mitochondrion	53.43	52.6
PGSC0003DMT400058369	Potato	mitochondrion	23.29	51.75
OQU83951	Sorghum	mitochondrion	50.14	51.09
TraesCS4A01G167800.1	Wheat	mitochondrion	49.43	50.58
TraesCS4D01G147200.1	Wheat	mitochondrion	49.29	50.44
TraesCSU01G068300.1	Wheat	mitochondrion	49.0	50.37
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	50.86	50.0
Zm00001d048718_P010	Maize	mitochondrion	49.57	49.93
HORVU4Hr1G032550.32	Barley	mitochondrion	48.57	49.63
KXG23613	Sorghum	mitochondrion	47.71	48.27
TraesCS5A01G094400.1	Wheat	mitochondrion	47.14	48.03
TraesCS5D01G106700.1	Wheat	mitochondrion	46.71	47.67
TraesCS5B01G100500.1	Wheat	mitochondrion	46.57	47.52
Os12t0538800-01	Rice	mitochondrion, nucleus	46.57	46.7
HORVU5Hr1G025430.25	Barley	mitochondrion	43.86	43.92
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	44.86	41.05
Os11t0657000-01	Rice	mitochondrion	9.43	40.74
Bra005805.1-P	Field mustard	cytosol	19.86	27.63
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	23.0	24.14
Bra001147.1-P	Field mustard	cytosol	22.43	22.99
Bra039439.1-P	Field mustard	cytosol	21.86	22.94
Bra040219.1-P	Field mustard	cytosol	21.57	22.71
Bra037506.1-P	Field mustard	cytosol	9.43	20.5
Bra029671.1-P	Field mustard	cytosol	3.29	19.01
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	9.71	18.63
Bra039702.1-P	Field mustard	cytosol	6.86	18.25
Bra008135.1-P	Field mustard	mitochondrion, nucleus	12.71	18.2
Bra040844.1-P	Field mustard	cytosol	3.43	18.05
Bra037958.1-P	Field mustard	cytosol	6.71	17.87
Bra005274.1-P	Field mustard	cytosol	9.14	17.16
Bra025672.1-P	Field mustard	nucleus	12.57	17.02
Bra016550.1-P	Field mustard	mitochondrion	12.57	16.79
Bra005279.1-P	Field mustard	cytosol	7.29	15.55
Bra040923.1-P	Field mustard	cytosol	10.71	14.73
Bra018943.1-P	Field mustard	cytosol	4.14	14.43
Bra020713.1-P	Field mustard	cytosol	2.29	13.45
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	11.86	12.44
Bra005272.1-P	Field mustard	cytosol	10.14	12.33
Bra021175.1-P	Field mustard	cytosol	4.14	11.2
Bra000617.1-P	Field mustard	endoplasmic reticulum	14.57	10.7
Bra018944.1-P	Field mustard	cytosol	11.71	10.35
Bra000803.1-P	Field mustard	cytosol	13.14	9.32
Bra022157.1-P	Field mustard	cytosol	1.43	7.94
Bra022159.1-P	Field mustard	cytosol	2.43	6.44

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EnsemblPlantsGene:Bra002170	EnsemblPlants:Bra002170.1	EnsemblPlants:Bra002170.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	UniProt:M4CD89
PFAM:PF01344	PFAM:PF13418	PANTHER:PTHR23244	PANTHER:PTHR23244:SF308	SUPFAM:SSF117281	UniParc:UPI000254376B
SEG:seg	:	:	:	:	:

Description

AT5G18590 (E=0.0) | kelch repeat-containing protein

Coordinates

chrA10:+:11108828..11112253

Molecular Weight (calculated)

76765.6 Da

IEP (calculated)

9.262

GRAVY (calculated)

-0.451

Length

700 amino acids

Sequence
(BLAST)

001: MFSFSKRRMK LGRVKVQLSD SSQGTKSPLR VTKRVDNSTN EAAALAATSH SDELDFQPSS GNSENWMGLS VSGDKPAPRF NHAAAAIGNK MIVVGGESGN
101: GLLDDVQVLN FDSFTWSTVS SKVYLSPSSL PLMIPSWKGH CLVSWGKKVL LVGGKTDPSS DRVSVWSFDT ESECWSLMDA KGDIPVSRSG HTVVRASSVL
201: ILFGGEDSRK RKLNDLHMFD LKSSTWLPLN CTGTRPCARS NHVATLFDDK ILFVFGGSGK NKTLNDLYSL DFETMVWSRI KIRGFHPSPR AGSCGVLCGN
301: KWYITGGGSR KKRHAETLVF DILKVEWSVA SISSQSSITA NKGFSLVLLQ HKDKDFLVAF GGTKKDPSNQ VEAFTIDKNK SESPTHQQTT SKKNTGRLLF
401: GKRSSSSAVL TSDESVKASS QRLIDSVARQ KLASAIEEHG GSGRRSLSEI AFADPRNPSS GNVSLRKQFS TEEEYRAVIE PPAKSPEEEK ITDEDSGGGA
501: KITAEKTLST VSDRELHKQS SEPFPFAHID DALIFPEMDN ATLAPSSSSV YQFHEAKMTA LIRRNGVLEG QLEAALAGRE AAERNVSVAL RSKQETDKKL
601: SDALRDVELL KEKLTGLELS QDEANSLSNM VHSDNVRLEH DVAFLRAVLD DTQKELQSTR GVLAGERARA FQLQVEVFHL KQRLQSLENR AATPRKPFHV

Best Arabidopsis Sequence Match ( AT5G18590.1 )
(BLAST)

001: MFSFSKRRMR LGRVKKVQLS DSVQGYKSPL RVTKRADSSS NEAAVAATSY SDELDFQPSS GNSENWMVLS VNGEKPAPRF NHAAATIGNK MIVVGGESGS
101: GLLDDVQVLN FDSCTWSTAS SKVYLSPSSL PLMIPAWKGH CLVSWGKKVL LVGGKTDPSS DRVSVWAFDT DSECWSLMDA KGDLPVSRSG HTVVRASSVL
201: ILFGGEDSKK RKLNDLHMFD LKSSTWLPLN CTGTRPCARS HHVATLFDDK ILFVFGGSGK NKTLNDLYSL DFETMVWSRI KIRGFHPSPR AGSCGVLCGT
301: KWYITGGGSR KKRHAETLVF DILKVEWSVA SISSQSSVTS NKGFSLVLLQ HKDKDFLVAF GGTKKDPSNQ VDAFTIDKNK SESPTHPQTT SKKNPGRLLF
401: GKRSSSSAVL TSDESVKASS QRLIDSVARQ KLASAIEEHG GSGRRSLSEI AFGDHRNPPS GNVSLRKQFS TEEEYRAVIE PAKCSEEDIS VPPPTTDDNT
501: GGAKITAEKT LSMVSDREIL SLQKQCSETY PLENVDGALI FQEMDNINFA GSASSSSVYQ FHEAKMTALI RRNGILEGQL EAALAGREAA ERNVSVALRS
601: KQETDKKLSD AMRDVELLKE KLTGLELAQE EANSLSNMVH SDNVRLEHDV AFLKAVLDDT QKELHSTRGV LAGERARAFQ LQVEVFHLKQ RLQSLENRAA
701: TPRKPFHV

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WWX4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.