Factsheet for TraesCS5A01G094400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G106700.1	Wheat	mitochondrion	97.38	97.52
TraesCS5B01G100500.1	Wheat	mitochondrion	96.51	96.65
HORVU5Hr1G025430.25	Barley	mitochondrion	89.67	88.13
Os12t0538800-01	Rice	mitochondrion, nucleus	79.77	78.51
KXG23613	Sorghum	mitochondrion	76.27	75.72
TraesCS4A01G167800.1	Wheat	mitochondrion	68.56	68.86
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	71.47	64.18
PGSC0003DMT400058372	Potato	mitochondrion	26.2	56.25
GSMUA_Achr3P23920_001	Banana	mitochondrion	55.17	53.31
VIT_05s0020g01740.t01	Wine grape	mitochondrion	53.13	50.91
PGSC0003DMT400050298	Potato	cytosol, plastid	27.8	50.8
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	52.4	50.56
Solyc01g067480.2.1	Tomato	mitochondrion	48.03	50.23
KRH02216	Soybean	mitochondrion	50.95	49.44
CDY13903	Canola	mitochondrion	48.18	49.11
KRH21038	Soybean	mitochondrion	49.78	48.17
KRH11220	Soybean	mitochondrion	50.07	47.91
KRH50909	Soybean	nucleus	50.66	47.87
AT5G18590.1	Thale cress	mitochondrion	49.05	47.6
Bra002170.1-P	Field mustard	mitochondrion	48.03	47.14
CDX92598	Canola	mitochondrion	47.89	47.0
PGSC0003DMT400058369	Potato	mitochondrion	16.3	35.56
TraesCS5A01G094000.1	Wheat	cytosol	21.4	27.89
TraesCS4A01G356400.2	Wheat	plastid	24.16	24.81
TraesCS6A01G406400.1	Wheat	cytosol	18.92	22.57
TraesCS5A01G168200.1	Wheat	mitochondrion	10.04	21.1
TraesCS4A01G356300.1	Wheat	mitochondrion	14.85	20.28
TraesCS3A01G192200.1	Wheat	cytosol, mitochondrion, nucleus, vacuole	14.85	16.83
TraesCS2A01G321200.1	Wheat	nucleus	15.14	15.73
TraesCS2A01G223200.1	Wheat	cytosol	15.57	9.84

Protein Annotations

EnsemblPlants:TraesCS5A01G094400.1	EnsemblPlantsGene:TraesCS5A01G094400	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	ncoils:Coil	PANTHER:PTHR23244	PANTHER:PTHR23244:SF414
PFAM:PF01344	PFAM:PF13418	SEG:seg	SUPFAM:SSF117281	MapMan:35.1	:

Description

No Description!

Coordinates

chr5A:-:130536923..130542132

Molecular Weight (calculated)

75363.9 Da

IEP (calculated)

9.321

GRAVY (calculated)

-0.572

Length

687 amino acids

Sequence
(BLAST)

001: MFAFSRRRMK LGRSKGHKSD PLHGSRSPGG HVSLSNGGDP ITASVSGRAD DLAYRCSSDS FDLDARALDS SENWAVLPTE GDKPAPRFSH AAAIIGSKMV
101: VFGGDSGHQL LDDTKILNLE KLTWDSTTPK VLPSPIRSTS KLPACKGHCM VSWGNSVILV GGKSEPATDR LSVWAFNTET EIWSLMEAKG DIPAARSGHT
201: VTRAGATLIL FGGEDAKGKK RHDLHMFDLK SSTWLPLNYK GSGPSPRSNH VAALYDDRIL LIFGGHSKSK TLNDLFSLDF ETMVWSRVKT NGPHPSPRAG
301: CSGALCGTKW YITGGGSKKK RQAETWVFDV LESKWTVRAV PPSSSITTKK GFSMVPLYHR DKIVLVAFGG NKKDPSDKVE VLVVLQNDHS YSWRSAPDVD
401: PLLYEYSPST KELAGHLNKC APLYSNSSVA RHSLTSTVER ASREEHGALG TSLHRKYGQV EDCSSLAQKL EKLIDDDKYD DVDDCSSCPA STPKDHRSKR
501: TGADTRTDMA RTVAVKEENT DNQGPSGRRI ARSSSDISHL YNNKITDLIR RNAALEDQLA AALASKEQAE KNLSLVMSSR EQLEKRLASR GKDAELLKEK
601: IAGLELAQEE SNSLSNAVHA DNVRLEREVA FLKAIADETR KEMHSTRRVL AGEQSRTFQL QVEVFHLKQG LQTAEGRSVT PRKPHNP

Best Arabidopsis Sequence Match ( AT5G18590.1 )
(BLAST)

001: MFSFSKRRMR LGRVKKVQLS DSVQGYKSPL RVTKRADSSS NEAAVAATSY SDELDFQPSS GNSENWMVLS VNGEKPAPRF NHAAATIGNK MIVVGGESGS
101: GLLDDVQVLN FDSCTWSTAS SKVYLSPSSL PLMIPAWKGH CLVSWGKKVL LVGGKTDPSS DRVSVWAFDT DSECWSLMDA KGDLPVSRSG HTVVRASSVL
201: ILFGGEDSKK RKLNDLHMFD LKSSTWLPLN CTGTRPCARS HHVATLFDDK ILFVFGGSGK NKTLNDLYSL DFETMVWSRI KIRGFHPSPR AGSCGVLCGT
301: KWYITGGGSR KKRHAETLVF DILKVEWSVA SISSQSSVTS NKGFSLVLLQ HKDKDFLVAF GGTKKDPSNQ VDAFTIDKNK SESPTHPQTT SKKNPGRLLF
401: GKRSSSSAVL TSDESVKASS QRLIDSVARQ KLASAIEEHG GSGRRSLSEI AFGDHRNPPS GNVSLRKQFS TEEEYRAVIE PAKCSEEDIS VPPPTTDDNT
501: GGAKITAEKT LSMVSDREIL SLQKQCSETY PLENVDGALI FQEMDNINFA GSASSSSVYQ FHEAKMTALI RRNGILEGQL EAALAGREAA ERNVSVALRS
601: KQETDKKLSD AMRDVELLKE KLTGLELAQE EANSLSNMVH SDNVRLEHDV AFLKAVLDDT QKELHSTRGV LAGERARAFQ LQVEVFHLKQ RLQSLENRAA
701: TPRKPFHV

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WWX4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.