Factsheet for Os12t0538800-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G100500.1	Wheat	mitochondrion	78.8	80.17
TraesCS5D01G106700.1	Wheat	mitochondrion	78.8	80.17
TraesCS5A01G094400.1	Wheat	mitochondrion	78.51	79.77
KXG23613	Sorghum	mitochondrion	78.37	79.05
HORVU5Hr1G025430.25	Barley	mitochondrion	74.36	74.25
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	73.78	67.32
Os11t0657000-01	Rice	mitochondrion	15.33	66.05
PGSC0003DMT400058372	Potato	mitochondrion	25.93	56.56
VIT_05s0020g01740.t01	Wine grape	mitochondrion	54.01	52.58
GSMUA_Achr3P23920_001	Banana	mitochondrion	53.15	52.18
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	52.01	50.98
Solyc01g067480.2.1	Tomato	mitochondrion	47.85	50.84
KRH02216	Soybean	mitochondrion	50.72	50.0
KRH11220	Soybean	mitochondrion	50.86	49.44
KRH21038	Soybean	mitochondrion	50.14	49.3
PGSC0003DMT400050298	Potato	cytosol, plastid	26.5	49.2
KRH50909	Soybean	nucleus	50.29	48.28
CDY13903	Canola	mitochondrion	46.28	47.92
AT5G18590.1	Thale cress	mitochondrion	47.28	46.61
Bra002170.1-P	Field mustard	mitochondrion	46.7	46.57
CDX92598	Canola	mitochondrion	46.56	46.43
PGSC0003DMT400058369	Potato	mitochondrion	17.05	37.78
Os12t0540800-01	Rice	extracellular	22.92	30.36
Os02t0822800-01	Rice	cytosol	19.77	26.59
Os03t0835600-01	Rice	plastid	23.64	25.19
Os03t0835800-02	Rice	cytosol	14.47	20.16
Os09t0249000-01	Rice	cytosol, plasma membrane, plastid	9.46	19.88
Os01t0300900-01	Rice	cytosol	14.76	16.51
Os04t0483600-01	Rice	nucleus	15.19	16.01
Os07t0515000-01	Rice	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EntrezGene:4352427	ProteinID:ABA99338.1	ProteinID:BAF29963.1	ProteinID:BAT17479.1
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	EnsemblPlantsGene:Os12g0538800
EnsemblPlants:Os12t0538800-01	PFAM:PF13418	PANTHER:PTHR23244	PANTHER:PTHR23244:SF414	UniProt:Q2QP85	SUPFAM:SSF117281
UniParc:UPI0000680EE6	RefSeq:XP_015620032.1	RefSeq:XP_015620033.1	SEG:seg	:	:

Description

Kelch-type beta propeller domain containing protein. (Os12t0538800-01)

Coordinates

chr12:+:21488044..21493700

Molecular Weight (calculated)

77331.6 Da

IEP (calculated)

8.927

GRAVY (calculated)

-0.538

Length

698 amino acids

Sequence
(BLAST)

001: MPNMFGFSRS RMRIGRSKGH STDPLDSSKS PSGLVKHLSL PNGDDQITTS VSGRVDDLAF RCSSDTYDLD DRALVSSRNW AVLSTEGSRP SPRFAHAAAL
101: VGSKMVVFGG DSGDQLLDDT KILNLEKLTW DSVAPKVRPS PNRRPSKLPA CKGHCLVQWG NSVILVGGKT EPASDRLAVW TFNMETEVWS LMEAKGDIPA
201: ARSGHTVTRA GATLILFGGE DTKGKKRHDL HMFDLKSSTW LPLNYKGSGP SPRSNHVAAL YEDRILLIFG GHSKSKTLND LFSLDFETMV WSRVKIHGPH
301: PTPRAGCSGV LCGTKWYIAG GGSKKKRHAE TWAFDVVEYK WSVCVVPPSS SIATKKDFSM VPLYHRDKIV LVAFGGNRKE PSDKVEILVV LQNEHSFSRR
401: SAPDVDPLLY EYSPSTKELA SHLNNCAPLY SNSSVARHSL ASTVEHPPRR ELLSEPLLQN PNLGASLHRQ FHQSEACSLA QKLQKPIDDD KYDDTDDCSS
501: CQASTPKEYR SKRTGTDAQI NMARILSSKE ENLETTGSSA RRIARCSSDI SHLYNTKIVD LIKRSSALED QLATALVSKE QAEKNLSSVI NSREQLERRL
601: ANKEKEAEML KEKIAGLELA QEESNNLSNT VHADNVRLER EVAFLKAITD ETQKELHSTR RVLAGEQSRA FQLQVEVFHL KQRLQMEGRA GTPKNPPV

Best Arabidopsis Sequence Match ( AT5G18590.1 )
(BLAST)

001: MFSFSKRRMR LGRVKKVQLS DSVQGYKSPL RVTKRADSSS NEAAVAATSY SDELDFQPSS GNSENWMVLS VNGEKPAPRF NHAAATIGNK MIVVGGESGS
101: GLLDDVQVLN FDSCTWSTAS SKVYLSPSSL PLMIPAWKGH CLVSWGKKVL LVGGKTDPSS DRVSVWAFDT DSECWSLMDA KGDLPVSRSG HTVVRASSVL
201: ILFGGEDSKK RKLNDLHMFD LKSSTWLPLN CTGTRPCARS HHVATLFDDK ILFVFGGSGK NKTLNDLYSL DFETMVWSRI KIRGFHPSPR AGSCGVLCGT
301: KWYITGGGSR KKRHAETLVF DILKVEWSVA SISSQSSVTS NKGFSLVLLQ HKDKDFLVAF GGTKKDPSNQ VDAFTIDKNK SESPTHPQTT SKKNPGRLLF
401: GKRSSSSAVL TSDESVKASS QRLIDSVARQ KLASAIEEHG GSGRRSLSEI AFGDHRNPPS GNVSLRKQFS TEEEYRAVIE PAKCSEEDIS VPPPTTDDNT
501: GGAKITAEKT LSMVSDREIL SLQKQCSETY PLENVDGALI FQEMDNINFA GSASSSSVYQ FHEAKMTALI RRNGILEGQL EAALAGREAA ERNVSVALRS
601: KQETDKKLSD AMRDVELLKE KLTGLELAQE EANSLSNMVH SDNVRLEHDV AFLKAVLDDT QKELHSTRGV LAGERARAFQ LQVEVFHLKQ RLQSLENRAA
701: TPRKPFHV

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WWX4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.