Factsheet for Os03t0835600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90565	Sorghum	plastid	88.09	87.56
TraesCS4A01G356400.2	Wheat	plastid	87.48	85.65
TraesCS5B01G515800.1	Wheat	cytosol, peroxisome, plastid	87.33	85.5
TraesCS5D01G515900.2	Wheat	plastid	87.02	85.2
Zm00001d034758_P003	Maize	plastid	85.34	82.09
HORVU5Hr1G117970.2	Barley	plastid	86.11	81.03
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	74.35	72.26
Zm00001d046434_P003	Maize	plastid	67.18	72.25
Zm00001d012892_P002	Maize	plastid	82.75	69.22
VIT_14s0060g02410.t01	Wine grape	plastid	70.23	68.25
GSMUA_Achr6P20340_001	Banana	plastid	70.53	67.74
Bra039439.1-P	Field mustard	cytosol	65.34	64.17
CDY05166	Canola	cytosol, nucleus, plastid	65.19	64.11
CDY27769	Canola	cytosol	65.19	64.11
Solyc01g099350.2.1	Tomato	extracellular	65.19	63.83
AT3G05420.2	Thale cress	cytosol	65.19	63.83
KRG96823	Soybean	cytosol, plastid	63.21	63.79
KRH68531	Soybean	nucleus	63.97	63.68
CDY40708	Canola	cytosol	64.58	63.51
CDY18777	Canola	cytosol	64.27	63.31
CDY18797	Canola	cytosol	64.27	63.21
Bra040219.1-P	Field mustard	cytosol	64.12	63.16
PGSC0003DMT400063503	Potato	extracellular	32.21	62.99
KRG92884	Soybean	nucleus	63.36	62.97
CDX74147	Canola	cytosol, nucleus, plastid	63.36	62.31
AT5G27630.3	Thale cress	cytosol, mitochondrion, nucleus, plastid	62.9	61.68
Bra001147.1-P	Field mustard	cytosol	63.66	61.05
CDY05568	Canola	plastid	61.68	60.57
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	61.37	60.27
CDY25029	Canola	cytosol, nucleus, plastid	60.46	59.1
Os12t0540800-01	Rice	extracellular	43.51	54.08
Os02t0822800-01	Rice	cytosol	34.2	43.16
Os11t0657000-01	Rice	mitochondrion	5.95	24.07
Os12t0538800-01	Rice	mitochondrion, nucleus	25.19	23.64
Os09t0249000-01	Rice	cytosol, plasma membrane, plastid	11.6	22.89
Os03t0835800-02	Rice	cytosol	14.5	18.96
Os01t0300900-01	Rice	cytosol	16.95	17.79
Os04t0483600-01	Rice	nucleus	15.42	15.26
Os07t0515000-01	Rice	cytosol	0.46	6.82

Protein Annotations

Gene3D:1.20.80.10	Gene3D:2.120.10.80	MapMan:35.1	InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf	ProteinID:BAS87247.1
ncoils:Coil	InterPro:FERM/acyl-CoA-bd_prot_sf	GO:GO:0000062	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0008289
InterPro:IPR000582	InterPro:IPR014352	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	EnsemblPlantsGene:Os03g0835600
EnsemblPlants:Os03t0835600-01	PFAM:PF00887	PFAM:PF01344	PFAM:PF13415	PFAM:PF13418	PFscan:PS51228
PANTHER:PTHR23244	PANTHER:PTHR23244:SF336	SUPFAM:SSF117281	SUPFAM:SSF47027	UniParc:UPI0000DB43CC	SEG:seg

Description

Acyl-CoA-binding protein 6Acyl-CoA-binding protein , Peroxisomal beta-oxidation, Lipid metabolism, Stress response (Os03t0835600-01);Hypothetical conserved gene. (Os03t0835600-02)

Coordinates

chr3:-:35105148..35112495

Molecular Weight (calculated)

71418.7 Da

IEP (calculated)

4.999

GRAVY (calculated)

-0.413

Length

655 amino acids

Sequence
(BLAST)

001: MASSGLAYPD RFYAAAAYAG FGAGGATSSS AISRFQNDVA LLLYGLYQQA TVGPCNVPKP RAWNPVEQSK WTSWHGLGSM PSAEAMRLFV KILEEEDPGW
101: YSRVPEFNPE PVVDIEMHKP KEDPKVILAS TNGTSVPEPK TISENGSSVE TQDKVVILEG LSAVSVHEEW TPLSVNGQRP KPRYEHGATV VQDKMYIFGG
201: NHNGRYLSDL QALDLKSLTW SKIDAKFQAG STDSSKSAQV SSCAGHSLIS WGNKFFSVAG HTKDPSENIT VKEFDPHTCT WSIVKTYGKP PVSRGGQSVT
301: LVGTTLVLFG GEDAKRCLLN DLHILDLETM TWDDVDAIGT PPPRSDHAAA CHADRYLLIF GGGSHATCFN DLHVLDLQTM EWSRPKQQGL APSPRAGHAG
401: ATVGENWYIV GGGNNKSGVS ETLVLNMSTL TWSVVSSVEG RVPLASEGMT LVHSNYNGDD YLISFGGYNG RYSNEVFALK LTLKSDLQSK TKEHASDGTS
501: SVLEPEVELS HDGKIREIAM DSADSDLKDD ANELLVALKA EKEELEAALN REQVQTIQLK EEIAEAEARN AELTKELQTV RGQLAAEQSR CFKLEVDVAE
601: LRQKLQSMDA LEREVELLRR QKAASEQAAL EAKQRQSSSG MWGWLVGTPP DKSES

Best Arabidopsis Sequence Match ( AT3G05420.1 )
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP

Arabidopsis Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.