Factsheet for GSMUA_Achr6P20340_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	83.87	84.87
VIT_14s0060g02410.t01	Wine grape	plastid	70.23	71.07
EER90565	Sorghum	plastid	68.48	70.86
Os03t0835600-01	Rice	plastid	67.74	70.53
TraesCS4A01G356400.2	Wheat	plastid	67.74	69.06
TraesCS5B01G515800.1	Wheat	cytosol, peroxisome, plastid	67.74	69.06
Solyc01g099350.2.1	Tomato	extracellular	67.3	68.61
TraesCS5D01G515900.2	Wheat	plastid	67.3	68.61
PGSC0003DMT400063503	Potato	extracellular	33.58	68.36
Zm00001d034758_P003	Maize	plastid	67.01	67.11
HORVU5Hr1G117970.2	Barley	plastid	67.3	65.95
Bra039439.1-P	Field mustard	cytosol	64.08	65.52
CDY05166	Canola	cytosol, nucleus, plastid	63.93	65.47
CDY27769	Canola	cytosol	63.93	65.47
KRH68531	Soybean	nucleus	62.9	65.2
KRG96823	Soybean	cytosol, plastid	61.29	64.41
KRG92884	Soybean	nucleus	61.88	64.04
CDY18777	Canola	cytosol	62.32	63.91
AT3G05420.2	Thale cress	cytosol	62.61	63.83
Bra040219.1-P	Field mustard	cytosol	62.02	63.61
CDY40708	Canola	cytosol	62.02	63.51
CDX74147	Canola	cytosol, nucleus, plastid	61.88	63.36
CDY18797	Canola	cytosol	61.58	63.06
AT5G27630.3	Thale cress	cytosol, mitochondrion, nucleus, plastid	61.44	62.72
Bra001147.1-P	Field mustard	cytosol	62.17	62.08
CDY05568	Canola	plastid	60.12	61.47
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	60.12	61.47
CDY25029	Canola	cytosol, nucleus, plastid	60.12	61.19
HORVU5Hr1G025310.1	Barley	cytosol	42.23	59.88
Zm00001d046434_P003	Maize	plastid	52.93	59.28
TraesCS5D01G106400.1	Wheat	cytosol	45.01	58.37
TraesCS5A01G094000.1	Wheat	cytosol	45.01	58.25
TraesCS5B01G100100.1	Wheat	cytosol	45.01	58.03
Os12t0540800-01	Rice	extracellular	44.43	57.5
Zm00001d012892_P002	Maize	plastid	65.4	56.96
EES16101	Sorghum	cytosol, nucleus, plastid	43.4	54.92
Zm00001d041692_P001	Maize	nucleus	40.18	50.46
GSMUA_Achr9P23600_001	Banana	cytosol	32.7	39.68
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	24.34	23.31
GSMUA_Achr3P23920_001	Banana	mitochondrion	24.19	23.21
GSMUA_Achr3P30430_001	Banana	cytosol	14.08	20.43
GSMUA_Achr8P07640_001	Banana	cytosol	14.66	20.04
GSMUA_Achr10P...	Banana	cytosol	6.16	18.5
GSMUA_Achr8P29940_001	Banana	cytosol	15.84	17.14
GSMUA_Achr10P...	Banana	nucleus	8.94	12.32
GSMUA_Achr6P29460_001	Banana	cytosol	18.48	11.81

Protein Annotations

Gene3D:1.20.80.10	Gene3D:2.120.10.80	MapMan:35.1	InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf	ncoils:Coil
InterPro:FERM/acyl-CoA-bd_prot_sf	GO:GO:0000062	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr6G20340_001
EnsemblPlants:GSMUA_Achr6P20340_001	EnsemblPlants:GSMUA_Achr6T20340_001	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR000582	InterPro:IPR014352	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	UniProt:M0T8N2	PFAM:PF00887	PFAM:PF01344	PFAM:PF13415
PFAM:PF13418	PFscan:PS51228	PANTHER:PTHR23244	PANTHER:PTHR23244:SF336	SUPFAM:SSF47027	SUPFAM:SSF50965
UniParc:UPI0002948354	SEG:seg	:	:	:	:

Description

Acyl-CoA-binding domain-containing protein 4 [Source:GMGC_GENE;Acc:GSMUA_Achr6G20340_001]

Coordinates

chr6:+:14828151..14838675

Molecular Weight (calculated)

73931.5 Da

IEP (calculated)

5.419

GRAVY (calculated)

-0.302

Length

682 amino acids

Sequence
(BLAST)

001: MATARASSGL AYPERFYVAA SYAGFGGSPG SSAPAGGVSR FQNDVALLLY ALYQQATVGA CTVPKPRAWN PVEQSKWTSW HGLGNMASTE AMRLFVKILE
101: EEDPAWYSKA PELTAEPIIN VETLKTELEP AAASASGNGD SLPKTKTVSA ENGLLLETQD KDVITEGIGS VGIYDQWVAP SVSGQRPKSR YAHGAAVLRG
201: KMYIFGGNHN GRYLNDIQVL DLKKLTWSRI EARELSGSLD SSAIASVSPC AGHSLIPWGN KILSIAGHTK DPSEMISVKE FDPQTCLWSN LKTYGKSPIS
301: RGGQSVTLVG NTLVMFGGED AKRSLLNDLH ILDLETMTWD DIDAIGIPPS PRSDHAAACH ADRYLLIFGG GSHATCFNDL HVLDLQTMEW SKPKQQGVNP
401: GPRAGHAGIT VGDNWFIAGG GNNKNGVSET LVLNMATLVW SVVMTVQGRV PLASEGLSLV TSTHKGEDFL VSFGGYNGRY SNEVYVLKPS HVSDLQSRII
501: DGPVSDTIAA MLPTTDASRD MEPEIEPAQD KKIKEIVMEN GDSEPLNIRN EVTIRLVEAL KAEKGELEGT LNKEQLQMLH LKQEFNDAES RNIELTKASF
601: MSELQSVRGQ LAAEQSRCFK LEVDIVELRQ KLQAMETLEK EVELLRRQKA TSEHAALSTH QRQSSGGVWG WLAGSAPDQS GP

Best Arabidopsis Sequence Match ( AT3G05420.1 )
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP

Arabidopsis Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.