Factsheet for VIT_14s0060g02410.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g099350.2.1	Tomato	extracellular	79.23	79.82
KRG96823	Soybean	cytosol, plastid	74.63	77.5
KRH68531	Soybean	nucleus	75.07	76.9
CDY05166	Canola	cytosol, nucleus, plastid	75.96	76.88
CDY27769	Canola	cytosol	75.96	76.88
Bra039439.1-P	Field mustard	cytosol	75.82	76.61
PGSC0003DMT400063503	Potato	extracellular	37.98	76.42
KRG92884	Soybean	nucleus	74.63	76.33
AT3G05420.2	Thale cress	cytosol	75.67	76.23
CDY18777	Canola	cytosol	74.18	75.19
Bra040219.1-P	Field mustard	cytosol	73.74	74.74
CDY18797	Canola	cytosol	73.74	74.62
AT5G27630.3	Thale cress	cytosol, mitochondrion, nucleus, plastid	73.44	74.1
CDY40708	Canola	cytosol	72.85	73.72
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	73.44	73.44
CDX74147	Canola	cytosol, nucleus, plastid	72.4	73.27
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	71.36	72.11
CDY05568	Canola	plastid	71.07	71.81
Bra001147.1-P	Field mustard	cytosol	72.7	71.74
CDY25029	Canola	cytosol, nucleus, plastid	71.22	71.64
GSMUA_Achr6P20340_001	Banana	plastid	71.07	70.23
Os03t0835600-01	Rice	plastid	68.25	70.23
EER90565	Sorghum	plastid	68.55	70.11
TraesCS5D01G515900.2	Wheat	plastid	67.06	67.56
TraesCS4A01G356400.2	Wheat	plastid	67.06	67.56
TraesCS5B01G515800.1	Wheat	cytosol, peroxisome, plastid	66.91	67.41
Zm00001d034758_P003	Maize	plastid	66.47	65.79
HORVU5Hr1G117970.2	Barley	plastid	66.32	64.22
Zm00001d046434_P003	Maize	plastid	52.97	58.62
HORVU5Hr1G025310.1	Barley	cytosol	40.8	57.17
Zm00001d012892_P002	Maize	plastid	65.28	56.19
Os12t0540800-01	Rice	extracellular	43.92	56.17
TraesCS5D01G106400.1	Wheat	cytosol	43.47	55.7
TraesCS5A01G094000.1	Wheat	cytosol	43.03	55.03
TraesCS5B01G100100.1	Wheat	cytosol	42.88	54.63
EES16101	Sorghum	cytosol, nucleus, plastid	42.43	53.06
Zm00001d041692_P001	Maize	nucleus	39.02	48.43
VIT_13s0019g05290.t01	Wine grape	cytosol	36.5	48.43
VIT_12s0057g01080.t01	Wine grape	cytosol	12.02	24.77
VIT_05s0020g01740.t01	Wine grape	mitochondrion	25.52	23.99
VIT_14s0060g01090.t01	Wine grape	nucleus	16.62	17.5
VIT_13s0074g00620.t01	Wine grape	cytosol	13.65	16.55
VIT_17s0000g05150.t01	Wine grape	cytosol	13.65	15.21
VIT_17s0000g10130.t01	Wine grape	nucleus	14.69	14.52
VIT_10s0116g01770.t01	Wine grape	cytosol	19.14	12.38

Protein Annotations

Gene3D:1.20.80.10	EntrezGene:100240812	wikigene:100240812	Gene3D:2.120.10.80	MapMan:35.1	InterPro:Acyl-CoA-binding_protein
InterPro:Acyl-CoA-binding_sf	ProteinID:CBI39496	ProteinID:CBI39496.3	ncoils:Coil	UniProt:D7U9T2	InterPro:FERM/acyl-CoA-bd_prot_sf
EMBL:FN596746	GO:GO:0000062	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000582
InterPro:IPR014352	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	EntrezGene:LOC100240812	wikigene:LOC100240812
PFAM:PF00887	PFAM:PF01344	PFAM:PF13415	PFAM:PF13418	PFscan:PS51228	PANTHER:PTHR23244
PANTHER:PTHR23244:SF336	SUPFAM:SSF117281	SUPFAM:SSF47027	TIGR:TC59063	UniParc:UPI0001BE515F	ArrayExpress:VIT_14s0060g02410
EnsemblPlantsGene:VIT_14s0060g02410	EnsemblPlants:VIT_14s0060g02410.t01	unigene:Vvi.829	RefSeq:XP_002284019	RefSeq:XP_002284019.1	RefSeq:XP_002284025
RefSeq:XP_002284025.1	RefSeq:XP_010659627.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr14:-:2034944..2046470

Molecular Weight (calculated)

73687.5 Da

IEP (calculated)

4.910

GRAVY (calculated)

-0.416

Length

674 amino acids

Sequence
(BLAST)

001: MSMAMARASS GLAYPDRFYA AASYAGFDGS PNSSSKGVSS KFSNDVALLL YALYQQATVG RCTIPKPRGW NPIEQSKWTS WHGLGNMAAA EAMRLFVKIL
101: EEEDPGWYSR ASDFVAEPVV DVEMNHHPKV EPVTENGNSF PETKTISHEN GSMLETQDKD VVLEGLGSIA VYDQWIAPSV SGQRPKPRYE HGAAVVQDKM
201: YIFGGNHNGR YLNDLQVLDL RSWTWSKVEV KAGTESLESP STVPLPSCAG HSLIQWENKL LSIAGHTKDP SETIQVKAFD LQTCTWSTLK TYGKAPASRG
301: GQSVTLVGTS LVIFGGQDAK RSLLNDLHLL DLETMTWDEI DAVGVPPSPR SDHAAAVHAE RYLLIFGGGS HATCFNDLHV LDLQAMEWSR PTQQGDIPTP
401: RAGHAGVPVG ENWFIVGGGD NKSGVSETVV LNMSTLVWSV VTTVQGRVPL ASEGLSLVVG SYNGEDVLIS FGGYNGRYSN EVNVLKPSHK SSLQTKIMEP
501: VPESVSAVHN ATNATRDVES EFEAGQEGKI REIVMDNIDS EPMIKNEETG EGLIATLKSE KEELESSLNK EKTQSLQLKQ ELAEAETRNS DLYKELQSVR
601: GQLAAEQSRC FKLEVDVAEL RQKLQTMETL QKELELLQRQ KAASEQALNA KQRQSSGGMW GWLAGTPNEK ADDA

Best Arabidopsis Sequence Match ( AT3G05420.2 )
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INQRAKDEPV VENGSTFSET KTISTENGRL AETQDKDVVS EDSNTVSVYN QWTAPQTSGQ RPKARYEHGA AVIQDKMYIY
201: GGNHNGRYLG DLHVLDLKSW TWSRVETKVA TESQETSTPT LLAPCAGHSL IAWDNKLLSI GGHTKDPSES MQVKVFDPHT ITWSMLKTYG KPPVSRGGQS
301: VTMVGKTLVI FGGQDAKRSL LNDLHILDLD TMTWDEIDAV GVSPSPRSDH AAAVHAERFL LIFGGGSHAT CFDDLHVLDL QTMEWSRPAQ QGDAPTPRAG
401: HAGVTIGENW FIVGGGDNKS GASESVVLNM STLAWSVVAS VQGRVPLASE GLSLVVSSYN GEDVLVAFGG YNGRYNNEIN LLKPSHKSTL QTKTLEAPLP
501: GSLSAVNNAT TRDIESEVEV SQEGRVREIV MDNVNPGSKV EGNSERIIAT IKSEKEELEA SLNKERMQTL QLRQELGEAE LRNTDLYKEL QSVRGQLAAE
601: QSRCFKLEVD VAELRQKLQT LETLQKELEL LQRQKAASEQ AAMNAKRQGS GGVWGWLAGS PQEKDDDSP

Arabidopsis Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.