Factsheet for VIT_17s0000g05150.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26745	Canola	nucleus	50.58	59.19
Bra025672.1-P	Field mustard	nucleus	50.41	58.99
CDY19228	Canola	nucleus	49.42	57.83
CDX96712	Canola	mitochondrion	49.59	57.25
Bra016550.1-P	Field mustard	mitochondrion	49.26	56.87
AT1G18610.2	Thale cress	cytosol	52.23	56.83
CDX83831	Canola	nucleus	49.92	56.55
GSMUA_Achr3P30430_001	Banana	cytosol	43.8	56.38
CDY42440	Canola	mitochondrion	42.31	52.89
KRH03160	Soybean	cytosol	54.71	52.88
KRH56785	Soybean	nucleus	54.38	52.22
AT1G74150.1	Thale cress	cytosol, mitochondrion	49.09	52.2
Bra008135.1-P	Field mustard	mitochondrion, nucleus	42.15	52.15
Solyc03g114960.2.1	Tomato	nucleus	46.28	51.66
CDY49133	Canola	mitochondrion, nucleus	41.82	51.63
CDX73059	Canola	cytosol, mitochondrion	45.79	47.59
CDX96521	Canola	mitochondrion	45.62	44.81
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	45.95	41.68
VIT_12s0057g01080.t01	Wine grape	cytosol	13.55	25.08
VIT_14s0060g01090.t01	Wine grape	nucleus	22.64	21.41
VIT_13s0074g00620.t01	Wine grape	cytosol	15.54	16.91
VIT_13s0019g05290.t01	Wine grape	cytosol	14.05	16.73
VIT_17s0000g10130.t01	Wine grape	nucleus	15.87	14.08
VIT_14s0060g02410.t01	Wine grape	plastid	15.21	13.65
VIT_05s0020g01740.t01	Wine grape	mitochondrion	14.21	11.99
VIT_10s0116g01770.t01	Wine grape	cytosol	16.36	9.5

Protein Annotations

EntrezGene:100251831	wikigene:100251831	Gene3D:2.120.10.80	MapMan:35.1	ProteinID:CBI15322	ProteinID:CBI15322.3
UniProt:D7SIL1	EMBL:FN594950	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	EntrezGene:LOC100251831	wikigene:LOC100251831	PFAM:PF13415
PFAM:PF13418	PANTHER:PTHR23244	PANTHER:PTHR23244:SF401	SMART:SM00612	SUPFAM:SSF50965	TIGR:TC69286
UniParc:UPI0001BE0BAB	ArrayExpress:VIT_17s0000g05150	EnsemblPlantsGene:VIT_17s0000g05150	EnsemblPlants:VIT_17s0000g05150.t01	RefSeq:XP_002265482	RefSeq:XP_002265482.2
RefSeq:XP_010663460.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr17:+:5641390..5649165

Molecular Weight (calculated)

65993.5 Da

IEP (calculated)

6.717

GRAVY (calculated)

-0.555

Length

605 amino acids

Sequence
(BLAST)

001: MRWERLQLLR EEAPGMGAVE ISGPGKRWGH TCNAIKGGKL LYIFGGYGKD NCQTNQVHVF DTVKKTWNEP MIKGSPPTPR DSHSCTTVGD NLFVFGGTDG
101: MNPLKDLHIL DTSTHTWISP SVRGEGPEAR EGHTAALIGK RLFIFGGCGK SSNDSDEVYY NDLYILNTET FVWKRAQTSG TPPTARDSHT CSSWKNKIIV
201: IGGEDAYDYY LSDVHILDAD TLVWRELNAS GQMLPPRAGH TTVAFGKNLF VFGGFTDAQN LYDDLHMLDA DTGLWTKVLA TGDGPSARFS VAGDILDPQK
301: GGVLVFVGGC NKTLEALDDM YYLHTELVRE NGRDERKLER LSMRKQLKLK CQEQYLPAPG HDKALLTVGA NAVLCQSRPS ASHGQTSQQN FPINSSQILQ
401: GKKIFQANIT ESFPDGFTIE TIIDGKPLRG ILFSNKPSNS NMAKYNSSRK RAAGEVGGIK LNDSQKRKPK NARPFKQDEI EHRQADVAIG KESISCERQT
501: EAAAAGLNNL ATPNDSQAQT EAAAAAVSEN PEPTGDSHPQ KVTGNSSVLM QSILKLEYGR TNDALNQSTE SPAEITSTAA KECISLPPKE GDHGAPTTEE
601: KAKSF

Best Arabidopsis Sequence Match ( AT1G18610.2 )
(BLAST)

001: MRWERVRQLQ QQVGLGESSS GPGKRWGHTC NAIKGGSFLY VFGGYGRDNC QTNQVHVFDA AKQIWTQPMI NGTPPPPRDS HSCTTVGDNL FVFGGTDGVN
101: PLKDLYILDT SSHTWKCPSV RGEGPEAREG HSATLVGKRL FVFGGCGKSS GINEEIYYND VYIFNTETFV WKRAVTIGNP PSARDSHSCS SWKNKLVVIG
201: GEDGHDYYLS DVHILDTDTL IWKELNTSGQ LLTPRAGHVT VSLGRNFFVF GGFTDAQNLY DDLYVLDVDT CIWSKVLTMG EGPSARFSSA GACLDPHKAG
301: FLVIVGGCNK NLEALDDMFY LQTGLGYDAR FDQNVGMLSL KKQLKIKCQE QSHASSLYDK SLVRINMDHQ GRGNFGLNTC QFNEGKMMFQ ARITESYPVG
401: YTMETMIDGK VLRGVLFSNK RSSILPADQS FSRKRPAMSN GDQDNRSKIS RTLIKDQANA VESKDSQLNG MEAGIDTISN PLGVNITTVA VAPHETETSV
501: VTSDAKNQDA SQLDMGTVNT VNTAPSSVPQ VDEASLESRN AITIDDRANK TGLGES

Arabidopsis Description

F25I16.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9FZ82]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.