Factsheet for Bra008135.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49133	Canola	mitochondrion, nucleus	99.18	98.98
AT1G74150.1	Thale cress	cytosol, mitochondrion	69.53	59.75
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	76.07	55.77
Bra025672.1-P	Field mustard	nucleus	55.01	52.03
Bra016550.1-P	Field mustard	mitochondrion	53.78	50.19
GSMUA_Achr3P30430_001	Banana	cytosol	45.81	47.66
VIT_17s0000g05150.t01	Wine grape	cytosol	52.15	42.15
KRH63188	Soybean	cytosol	51.33	40.95
KRH54725	Soybean	cytosol	50.51	40.29
Solyc03g114960.2.1	Tomato	nucleus	44.17	39.85
Bra040844.1-P	Field mustard	cytosol	6.54	24.06
Bra039702.1-P	Field mustard	cytosol	12.07	22.43
Bra037506.1-P	Field mustard	cytosol	14.72	22.36
Bra037958.1-P	Field mustard	cytosol	10.84	20.15
Bra005805.1-P	Field mustard	cytosol	20.25	19.68
Bra005274.1-P	Field mustard	cytosol	14.93	19.57
Bra029671.1-P	Field mustard	cytosol	4.7	19.01
Bra005279.1-P	Field mustard	cytosol	11.86	17.68
Bra020713.1-P	Field mustard	cytosol	4.09	16.81
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	12.07	16.16
Bra018943.1-P	Field mustard	cytosol	5.93	14.43
Bra040923.1-P	Field mustard	cytosol	14.72	14.15
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	18.81	13.79
Bra040219.1-P	Field mustard	cytosol	18.2	13.38
Bra039439.1-P	Field mustard	cytosol	18.2	13.34
Bra001147.1-P	Field mustard	cytosol	18.4	13.18
Bra005272.1-P	Field mustard	cytosol	15.34	13.02
Bra002170.1-P	Field mustard	mitochondrion	18.2	12.71
Bra000617.1-P	Field mustard	endoplasmic reticulum	18.4	9.44
Bra000803.1-P	Field mustard	cytosol	18.61	9.22
Bra018944.1-P	Field mustard	cytosol	14.72	9.09
Bra022157.1-P	Field mustard	cytosol	1.64	6.35
Bra021175.1-P	Field mustard	cytosol	3.27	6.18
Bra022159.1-P	Field mustard	cytosol	2.45	4.55

Protein Annotations

EnsemblPlants:Bra008135.1	EnsemblPlants:Bra008135.1-P	EnsemblPlantsGene:Bra008135	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_2	PANTHER:PTHR23244
PANTHER:PTHR23244:SF401	PFAM:PF07646	PFAM:PF13418	PFAM:PF13854	SEG:seg	SUPFAM:SSF50965
UniParc:UPI0002545792	UniProt:M4CV88	MapMan:35.1	:	:	:

Description

AT1G74150 (E=2e-138) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2 (InterPro:IPR011498), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G18610.1); Has 8525 Blast hits to 4249 proteins in 295 species: Archae - 10; Bacteria - 313; Metazoa - 3989; Fungi - 859; Plants - 1220; Viruses - 19; Other Eukaryotes - 2115 (source: NCBI BLink).

Coordinates

chrA02:+:13353662..13355873

Molecular Weight (calculated)

54404.6 Da

IEP (calculated)

6.789

GRAVY (calculated)

-0.567

Length

489 amino acids

Sequence
(BLAST)

001: MRWERVQRQA GLADSSSGPG KRWGHTCNAV KGGRFVYVFG GFGKDGYFTS QVHVFDAGRQ IWSEPMMRGV PPSPRDSHSC TTVGDNLFVY GGTDGKYYLN
101: DLHVLDTSSH TWKCLEVRGE EPDAREAHSA TLVGKHIFVF GGRGKVPGLD DEVYFNDLYI LNTETITWQR AVTTGTRPFA RDGHTCSTWN NKIIVVGGEH
201: FEGEYLSDVH ILDTDTFAWK QMKTSWQQLT PRAGHITVAI ERNLFVFGGF RDPQSLYNDL YVLDVETGVW SKIVAMEDRP PARFSAAAVC LGPYKAGSFF
301: FFGGCNKNLE PLDDIYYFHT DGVVEARSAQ TRGRLPLRKL KCKEQQKEAV EQGKTVFQAR VTENSPLGYY TIETIIDGKV LRGVLLSNRH HSSVQTADPS
401: STSRQVCWKR SGMLDADCDH RAKTQRTLSK DTAGSSQQAG PVDPSDDAYK KANVEPLRNE MSTDVGAGGD SSPQKQDEER VAAEDAEPK

Best Arabidopsis Sequence Match ( AT1G74150.1 )
(BLAST)

001: MRWERVQQVG LGDSSSFGPG KRWGHTCNAI KGGRFLYVFG GFGRDNCLTN QVHVFDAETQ IWIRPEINGV PPCPRDSHSC TTVGDNLFVF GGTDGTKYLN
101: DVHILDTYSH TWIRPDIRGE GPRVREAHSA ALVDKRLFIF GGCGKSSDSD DEVFYNDLYI LNTETYMWKR AVTSGKPPSA RDSHTCSAWK NKIIVVGGED
201: LDDYYLSDVH ILDTDKFVWK ELKTSGQVLT PRAGHVTVAL ERNLFVFGGF TDSQNLYDDL YVLDLETGVW SKVVAMVEGP SARFSSAAVC LDPYKAGSFF
301: FVGGCNKNLE PLDDIYYLHT EGRYDVRFHQ NPGRSSLRKQ MKLKCQGQEL TVAKTNIDHG RENVPLNIGY IDQRKPMFQA RVTENAPLGY TIETIIDGKV
401: LRGVLFSNRH SSVRIADSSI SSRQVERPAT SDGDCDHRAK IPRTFSKDPA GSSQQAGPTD PSDDTNKKVA DSNDTDTPMI DTVDANVNME GTHEAETAAV
501: TIDAKDQDAS QLDKGIVNTD PLPVSHDQVN VISTDAAKAD PGVDSSTRKQ EEGTSAEEDA NVGPQPQQH

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HTV1]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.