CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63188	Soybean	cytosol	91.68	91.68
KRH56785	Soybean	nucleus	69.17	67.3
KRH03160	Soybean	cytosol	68.35	66.93
Bra025672.1-P	Field mustard	nucleus	45.84	54.35
CDY19228	Canola	nucleus	45.84	54.35
CDY26745	Canola	nucleus	45.68	54.16
Bra016550.1-P	Field mustard	mitochondrion	45.35	53.05
CDX96712	Canola	mitochondrion	45.35	53.05
CDX83831	Canola	nucleus	45.84	52.62
GSMUA_Achr3P30430_001	Banana	cytosol	40.29	52.55
AT1G18610.2	Thale cress	cytosol	46.49	51.26
CDY42440	Canola	mitochondrion	40.46	51.24
Bra008135.1-P	Field mustard	mitochondrion, nucleus	40.29	50.51
CDY49133	Canola	mitochondrion, nucleus	39.97	50.0
AT1G74150.1	Thale cress	cytosol, mitochondrion	45.02	48.51
Solyc03g114960.2.1	Tomato	nucleus	41.92	47.42
CDX73059	Canola	cytosol, mitochondrion	41.92	44.16
CDX96521	Canola	mitochondrion	43.39	43.18
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	42.58	39.13
KRH43755	Soybean	cytosol	13.7	25.61
KRG90521	Soybean	peroxisome	22.68	22.03
KRH33805	Soybean	nucleus	22.51	21.87
KRH68432	Soybean	cytosol, nucleus, plastid	22.19	21.45
KRG92046	Soybean	cytosol	16.64	20.48
KRG92111	Soybean	cytosol	4.4	19.71
KRG96716	Soybean	endoplasmic reticulum, nucleus, plasma membrane	22.19	18.97
KRH34674	Soybean	cytosol	15.01	18.25
KRG92113	Soybean	cytosol	10.44	17.44
KRG96823	Soybean	cytosol, plastid	18.43	17.41
KRH68531	Soybean	nucleus	17.94	16.72
KRG92884	Soybean	nucleus	17.46	16.24
KRH63715	Soybean	nucleus	16.15	15.0
KRH54239	Soybean	nucleus	15.99	14.85
KRH02216	Soybean	mitochondrion	14.85	12.85
KRH50909	Soybean	nucleus	14.85	12.52
KRH11220	Soybean	mitochondrion	14.52	12.4
KRH21038	Soybean	mitochondrion	14.19	12.25
KRH02069	Soybean	cytosol	9.95	9.9
KRH51088	Soybean	cytosol	16.31	9.3

Protein Annotations

EntrezGene:100808826	Gene3D:2.120.10.80	MapMan:35.1	EMBL:ACUP02003573	EnsemblPlantsGene:GLYMA_06G204800	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller	UniProt:I1KD29	InterPro:IPR015915	EnsemblPlants:KRH54725
ProteinID:KRH54725	ProteinID:KRH54725.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PFAM:PF01344	PFAM:PF13418
PFAM:PF13964	PANTHER:PTHR23244	PANTHER:PTHR23244:SF401	SMART:SM00612	SUPFAM:SSF50965	UniParc:UPI00023C3779

Description

hypothetical protein

Coordinates

chr6:-:19324810..19333895

Molecular Weight (calculated)

67176.2 Da

IEP (calculated)

5.937

GRAVY (calculated)

-0.461

Length

613 amino acids

Sequence
(BLAST)

001: MRWEKVEGIG REEGPGKRWG HTCNAVKDGR LLYLFGGYGK FNCQTNQVHV FDTLKQSWSE PAIKGPPPTP RDSHSCTVIG DNLFVFGGTD GTKLLNDLQI
101: LDTSSNTWVF PTVRGEAPDA REGHDAALVG KRLFVFGGCG KSADNINEVY YNDLYILNTE LFVWNRATTS GTPPSPRDGH TCSSWRNKII VIGGEDENDS
201: YLSDVHILDT DTLIWSKLCT SGQLLPPRAG HSTVSFGMNL FVFGGFTDAH NLYNDLYMLN IETCVWTKVA TTPNGPSARF SVAGDCLDPY MSGVLVFVGG
301: CNRNLEALDD MYYLYTGIAR ENEQRPEKLS LKKQLKRKCL EQNPNLVRNP VMCGYGVGAA SNQPMEILNC SQPSRLNIPV NQSLLPGKKM FQAQVKEKNS
401: AGYTIETVID GKPLHGVLFK NQPNTLIPVP NTSSRKRPVS EILSPASNGI HSQNVTAYKV LGQDRMQDKR ELRGESSESH ECHKDADTIV VSSNPTTVAE
501: SFKVSVNPEP EAVSLNRNGD EKNDTPKSLI ESLKNDGSND VTSSKGEIQI GVQINVPVSN YEIPTQMSDA PNCNADVLKP AAAEIIVCLP NEGVTGDCTT
601: PRTEGHNEQA KLT

Best Arabidopsis Sequence Match ( AT1G74150.3 )
(BLAST)

001: MRWERVQQVG LGDSSSFGPG KRWGHTCNAI KGGRFLYVFG GFGRDNCLTN QVHVFDAETQ IWIRPEINGV PPCPRDSHSC TTVGDNLFVF GGTDGTKYLN
101: DVHILDTYSH TWIRPDIRGE GPRVREAHSA ALVDKRLFIF GGCGKSSDSD DEVFYNDLYI LNTETYMWKR AVTSGKPPSA RDSHTCSAWK NKIIVVGGED
201: LDDYYLSDVH ILDTDKFVWK ELKTSGQVLT PRAGHVTVAL ERNLFVFGGF TDSQNLYDDL YVLDLETGVW SKVVAMVEGP SARFSSAAVC LDPYKAGSFF
301: FVGGCNKNLE PLDDIYYLHT GRYDVRFHQN PGRSSLRKQM KLKCQGQELT VAKTNIDHGR ENVPLNIGYI DQRKPMFQAR VTENAPLGYT IETIIDGKVL
401: RGVLFSNRHS SVRIADSSIS SRERPATSDG DCDHRAKIPR TFSKDPAGSS QQAGPTDPSD DTNKKVADSN DTDTPMIDTV DANVNMEGTH EAETAAVTID
501: AKDQDASQLD KGIVNTDPLP VSHDQVNVIS TDAAKADPGV DSSTRKQEEG TSAEEDANVG PQPQQH

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HTV1]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.