CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54725	Soybean	cytosol	91.68	91.68
KRH56785	Soybean	nucleus	69.0	67.14
KRH03160	Soybean	cytosol	68.52	67.09
CDY19228	Canola	nucleus	45.02	53.38
Bra025672.1-P	Field mustard	nucleus	44.86	53.19
CDY26745	Canola	nucleus	44.7	53.0
Bra016550.1-P	Field mustard	mitochondrion	45.19	52.86
CDX96712	Canola	mitochondrion	45.19	52.86
CDX83831	Canola	nucleus	46.0	52.81
GSMUA_Achr3P30430_001	Banana	cytosol	40.13	52.34
Bra008135.1-P	Field mustard	mitochondrion, nucleus	40.95	51.33
CDY42440	Canola	mitochondrion	40.46	51.24
CDY49133	Canola	mitochondrion, nucleus	40.62	50.82
AT1G18610.2	Thale cress	cytosol	45.84	50.54
AT1G74150.1	Thale cress	cytosol, mitochondrion	45.35	48.86
Solyc03g114960.2.1	Tomato	nucleus	41.92	47.42
CDX73059	Canola	cytosol, mitochondrion	42.25	44.5
CDX96521	Canola	mitochondrion	43.88	43.67
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	42.9	39.43
KRH43755	Soybean	cytosol	13.54	25.3
KRH33805	Soybean	nucleus	23.0	22.35
KRG90521	Soybean	peroxisome	23.0	22.35
KRH68432	Soybean	cytosol, nucleus, plastid	22.19	21.45
KRG92046	Soybean	cytosol	17.13	21.08
KRG92111	Soybean	cytosol	4.57	20.44
KRG96716	Soybean	endoplasmic reticulum, nucleus, plasma membrane	22.35	19.11
KRH34674	Soybean	cytosol	15.17	18.45
KRG92113	Soybean	cytosol	10.44	17.44
KRG96823	Soybean	cytosol, plastid	18.11	17.1
KRH68531	Soybean	nucleus	17.62	16.41
KRG92884	Soybean	nucleus	16.97	15.78
KRH63715	Soybean	nucleus	15.66	14.55
KRH54239	Soybean	nucleus	15.5	14.39
KRH02216	Soybean	mitochondrion	14.85	12.85
KRH50909	Soybean	nucleus	15.01	12.65
KRH11220	Soybean	mitochondrion	14.19	12.12
KRH21038	Soybean	mitochondrion	13.87	11.97
KRH02069	Soybean	cytosol	10.11	10.06
KRH51088	Soybean	cytosol	16.31	9.3

Protein Annotations

EMBL:ACUP02002640	EnsemblPlants:KRH63188	EnsemblPlantsGene:GLYMA_04G160700	EntrezGene:100785267	Gene3D:2.120.10.80	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	PANTHER:PTHR23244
PANTHER:PTHR23244:SF401	PFAM:PF13418	ProteinID:KRH63188	ProteinID:KRH63188.1	ProteinID:KRH63189.1	ProteinID:KRH63190.1
SEG:seg	SUPFAM:SSF50965	UniParc:UPI00023BFE19	UniProt:I1JWM9	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr4:+:39818871..39825701

Molecular Weight (calculated)

67136.2 Da

IEP (calculated)

7.056

GRAVY (calculated)

-0.501

Length

613 amino acids

Sequence
(BLAST)

001: MRWEKVKGIG GEEGPGKRWG HTCNAVRDGR FLYLFGGYGK FNCQTNQVHV FDTLKQSWSE PAIKGPPPTP RDSHSCTVIG DSLFVFGGTD GSKLLNDLHI
101: LDTSSHTWVF PTVRGEAPDA REGHDAALVG KRLFMFGGCG RSADNINEVY YNDLYILNTE LFVWNRATTS GTPPSPRDGH TCSSWRNKII VIGGEDENDS
201: YLSDVHILDT DTLIWSKLCT SGQLLPPRAG HSTVSFGKNL FVFGGFTDAQ SLYNDLYMLN IETCVWTKVA ITPNGPSARF SVAGDCLDPY MSGVLVFVGG
301: CNRNLEALDD MHYLYTGIAR ESEQRPKKLS LRKQLKLKCL EQNPNLVQNP VLCGYGVGAD SNQPMSILNY SQPSRLYIPV NQPLPPGKKM FQANVKGKNS
401: AGYTIETVID GKPLHGVLFK NQPNTLIPVP NTSSRKRTFS EILSPASNGI HSHNVMAYKV LRQDRMQDKQ ELRGESSESH ERHKEADTIV VSSNPTTAAK
501: SIKVSVNPEP EAVSMDQNGD EKNDTPKSLI ESLKNDGSND VTSSKGEVQI GGQINVPVSN YEIPRQMSDA PNCNADVLKP AAAKSAVCPP NQGVTGDCTT
601: PRTEGHNEQA KLT

Best Arabidopsis Sequence Match ( AT1G74150.3 )
(BLAST)

001: MRWERVQQVG LGDSSSFGPG KRWGHTCNAI KGGRFLYVFG GFGRDNCLTN QVHVFDAETQ IWIRPEINGV PPCPRDSHSC TTVGDNLFVF GGTDGTKYLN
101: DVHILDTYSH TWIRPDIRGE GPRVREAHSA ALVDKRLFIF GGCGKSSDSD DEVFYNDLYI LNTETYMWKR AVTSGKPPSA RDSHTCSAWK NKIIVVGGED
201: LDDYYLSDVH ILDTDKFVWK ELKTSGQVLT PRAGHVTVAL ERNLFVFGGF TDSQNLYDDL YVLDLETGVW SKVVAMVEGP SARFSSAAVC LDPYKAGSFF
301: FVGGCNKNLE PLDDIYYLHT GRYDVRFHQN PGRSSLRKQM KLKCQGQELT VAKTNIDHGR ENVPLNIGYI DQRKPMFQAR VTENAPLGYT IETIIDGKVL
401: RGVLFSNRHS SVRIADSSIS SRERPATSDG DCDHRAKIPR TFSKDPAGSS QQAGPTDPSD DTNKKVADSN DTDTPMIDTV DANVNMEGTH EAETAAVTID
501: AKDQDASQLD KGIVNTDPLP VSHDQVNVIS TDAAKADPGV DSSTRKQEEG TSAEEDANVG PQPQQH

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HTV1]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.