CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34674	Soybean	cytosol	96.35	26.19
PGSC0003DMT400070308	Potato	cytosol	55.47	20.82
VIT_13s0019g05290.t01	Wine grape	cytosol	70.07	18.9
AT5G04420.3	Thale cress	cytosol	64.23	17.12
CDY58438	Canola	cytosol	60.58	16.5
Bra005805.1-P	Field mustard	cytosol	59.12	16.1
CDY11290	Canola	cytosol	59.12	16.1
Solyc11g007960.1.1	Tomato	cytosol	56.2	15.65
TraesCS6B01G450700.1	Wheat	cytosol	43.07	11.13
TraesCS6D01G389800.2	Wheat	cytosol	43.07	11.03
HORVU6Hr1G093000.5	Barley	cytosol	42.34	10.86
Os02t0822800-01	Rice	cytosol	40.88	10.79
OQU85983	Sorghum	cytosol	40.88	10.71
TraesCS6A01G406400.1	Wheat	cytosol	43.07	10.24
KRH43755	Soybean	cytosol	24.09	10.06
GSMUA_Achr9P23600_001	Banana	cytosol	40.88	9.96
Zm00001d051876_P002	Maize	nucleus	39.42	9.09
KRH68531	Soybean	nucleus	40.15	8.36
KRG92884	Soybean	nucleus	39.42	8.19
KRG96823	Soybean	cytosol, plastid	38.69	8.17
KRH02216	Soybean	mitochondrion	29.2	5.65
KRG92046	Soybean	cytosol	20.44	5.62
KRH50909	Soybean	nucleus	29.2	5.5
KRH21038	Soybean	mitochondrion	28.47	5.49
KRH11220	Soybean	mitochondrion	27.01	5.15
KRH63188	Soybean	cytosol	20.44	4.57
KRH54725	Soybean	cytosol	19.71	4.4
KRH03160	Soybean	cytosol	18.98	4.15
KRG90521	Soybean	peroxisome	18.98	4.12
KRH33805	Soybean	nucleus	18.98	4.12
KRH56785	Soybean	nucleus	18.25	3.97
KRH68432	Soybean	cytosol, nucleus, plastid	18.25	3.94
KRH63715	Soybean	nucleus	18.25	3.79
KRH54239	Soybean	nucleus	18.25	3.79
KRG96716	Soybean	endoplasmic reticulum, nucleus, plasma membrane	18.25	3.49
KRH51088	Soybean	cytosol	18.25	2.33
KRH02069	Soybean	cytosol	0.0	0.0
KRG92113	Soybean	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02012729	EnsemblPlants:KRG92111	EnsemblPlantsGene:GLYMA_20G1919002	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR23244	PANTHER:PTHR23244:SF398
PFAM:PF01344	ProteinID:KRG92109.1	ProteinID:KRG92110.1	ProteinID:KRG92111	ProteinID:KRG92111.1	ProteinID:KRG92112.1
SEG:seg	SUPFAM:SSF117281	UniParc:UPI0006ED8BD2	UniProt:A0A0R0EEC8	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr20:+:43060665..43063542

Molecular Weight (calculated)

15328.1 Da

IEP (calculated)

6.958

GRAVY (calculated)

-0.461

Length

137 amino acids

Sequence
(BLAST)

001: MEVNNWHKEL KYDEWVPITV SGARPAARYK HAAAVVDEKL YIAGGSRNGR HLSDVQVFDL RSLTWSSLKL KANVRKDDDD SSQEILPATS GHNMIRWGEK
101: LLLLGGNSRE SSAELTVRYI DIETCQFGVI KTSGDVP

Best Arabidopsis Sequence Match ( AT5G04420.1 )
(BLAST)

001: MEEIRKEIDV GDWHSNLAHD EWTPLPVSGS RASARYKHAA VVVDEKLYIV GGSRNGRYLS DVQVFDLRSL TWSSLKLKTE SSSADNIQED DGSSLREAFP
101: AISDHRMIKW GNKLLLIGGH SKKSSDNMLV RFIDLETHSC GVIDVFGNVP ASRGGHSITL VGSRVLVFGG EDKNRRLLND LHVLHLETMT WDVVETKQTR
201: PVPRFDHTAA THSDRYLLIF GGCSHSIFYS DLHILDLQTM EWSQPHVQGD VVTPRAGHAG ITIDENWYIV GGGDNSTGCL ETLVLNMSKL VWSTSTHVEA
301: RHPLASEGLS VCSASVFGEN ILVAFGGYNG KYNNDIFVMR LKPGESSHPK IFKSPAAAAA AASVTAAYAI AKSDKSDYPP PANPTLNGNG NSLPERDIRN
401: RIDTIKEEKR ALESSIAETQ VENAKLREKI DEVNSSHTEL SQELQSVEGQ LISERSRCFK LEAQIAELQK ALESGQSIEA EVEMLRRQRS ASDEEEDGTV
501: QRQGSAGVWG LFGR

Arabidopsis Description

AT5G04420 protein [Source:UniProtKB/TrEMBL;Acc:Q9LZ83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.