Factsheet for HORVU6Hr1G093000.5

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G450700.1	Wheat	cytosol	95.32	96.04
TraesCS6D01G389800.2	Wheat	cytosol	95.69	95.51
TraesCS6A01G406400.1	Wheat	cytosol	95.69	88.72
Os02t0822800-01	Rice	cytosol	78.84	81.12
OQU85983	Sorghum	cytosol	79.21	80.88
Zm00001d051876_P002	Maize	nucleus	76.59	68.86
VIT_13s0019g05290.t01	Wine grape	cytosol	52.62	55.31
PGSC0003DMT400070308	Potato	cytosol	37.64	55.07
GSMUA_Achr9P23600_001	Banana	cytosol	56.93	54.09
KRG92113	Soybean	cytosol	36.7	53.41
Solyc11g007960.1.1	Tomato	cytosol	48.69	52.85
AT5G04420.3	Thale cress	cytosol	49.06	50.97
Bra005805.1-P	Field mustard	cytosol	47.75	50.7
CDY11290	Canola	cytosol	47.75	50.7
CDY58438	Canola	cytosol	47.57	50.5
KRH34674	Soybean	cytosol	47.57	50.4
KRG92111	Soybean	cytosol	10.86	42.34
HORVU5Hr1G025310.1	Barley	cytosol	34.83	38.67
HORVU5Hr1G117970.2	Barley	plastid	41.57	31.9
HORVU5Hr1G051310.1	Barley	cytosol, mitochondrion, peroxisome	13.67	22.32
HORVU4Hr1G032550.32	Barley	mitochondrion	25.09	19.56
HORVU5Hr1G025430.25	Barley	mitochondrion	23.78	18.17
HORVU5Hr1G117920.1	Barley	cytosol	17.6	17.97
HORVU3Hr1G040720.1	Barley	mitochondrion, nucleus, peroxisome, vacuole	16.67	14.38
HORVU2Hr1G083780.14	Barley	nucleus, plastid	16.29	13.04
HORVU2Hr1G046680.19	Barley	cytosol	17.6	8.6

Protein Annotations

Gene3D:1.20.5.340	Gene3D:2.120.10.80	MapMan:35.1	UniProt:A0A287V821	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005829	InterPro:Gal_Oxase/kelch_b-propeller	EnsemblPlantsGene:HORVU6Hr1G093000	EnsemblPlants:HORVU6Hr1G093000.5	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	InterPro:Kelch_2	PFAM:PF01344	PFAM:PF07646	PFAM:PF13418
PANTHER:PTHR23244	PANTHER:PTHR23244:SF336	SUPFAM:SSF50965	SUPFAM:SSF57997	UniParc:UPI000B471F52	SEG:seg

Description

No Description!

Coordinates

chrchr6H:-:578718288..578724119

Molecular Weight (calculated)

57861.9 Da

IEP (calculated)

5.098

GRAVY (calculated)

-0.377

Length

534 amino acids

Sequence
(BLAST)

001: MGVGVEEEEG AINGGEEGPG PGLAAATHDR WALLPPAQGS ARPSARYEHA AEVVQDKLYV VGGSRNGRSL SDVQVFDFRT SKWSALLLSP SRDSNQLNLE
101: NNAGNQPFPA LAGHSMVKWR NMLLVVAGNS RASTSNKVSV WFIDLETDSW SAVDTYGKVP MARGGQSVTL VGSRLIMFGG EDNKRRLLSD LHVLDLETMI
201: WEEVKTEKGG PAPRYDHSAA VYADHYLLIF GGSSHSTCFN DLYLLDLQTL EWSQPDTQGA HITPRSGHAG MMIDGNWYIV GGGDNASGST DTIVMNASKF
301: VWSVVTSVSV RDPLACEGLT LCSTTVDGEK FLIAFGGYNG KYNNEIFVMK PKPRNFVQPR LFQSPAAAAA AASVKAAYAV ITATDEKTKD IVATDDLDVK
401: RAESGSSSKQ MVAEIDALNG EKGELESRLA EIRAENSKLK DKLDTVKLSY SELTKELRSV ENQLAAEGSR CQKLESQIAA AHKRLESASS LENELEALQQ
501: QMSQAEQTMT TSQRRKSGGV WKWVGGTAEV SDNE

Best Arabidopsis Sequence Match ( AT5G04420.2 )
(BLAST)

001: MEEIRKEIDV GDWHSNLAHD EWTPLPVSGS RASARYKHAA VVVDEKLYIV GGSRNGRYLS DVQVFDLRSL TWSSLKLKTE SSSADNIQED DGSSLREAFP
101: AISDHRMIKW GNKLLLIGGH SKKSSDNMLV RFIDLETHSC GVIDVFGNVP ASRGGHSITL VGSRVLVFGG EDKNRRLLND LHVLHLETMT WDVVETKQTR
201: PVPRFDHTAA THSDRYLLIF GGCSHSIFYS DLHILDLQTM EWSQPHVQGD VVTPRAGHAG ITIDENWYIV GGGDNSTGCL ETLVLNMSKL VWSTSTHVEA
301: RHPLASEGLS VCSASVFGEN ILVAFGGYNG KYNNDIFVMR LKPGESSHPK IFKSPAAAAA AASVTAAYAI AKSDKSDYPP PANPTLNGNG NSLPERDIRN
401: RIDTIKEEKR ALESSIAETQ VENAKLREKI DEVNSSHTEL SQELQSVEGQ LISERSRCFK LEAQIAELQK ALESGQSIEA EVEMLRRQRS ASDEEEDGTV
501: QRQGSAGVWG LFGR

Arabidopsis Description

AT5G04420 protein [Source:UniProtKB/TrEMBL;Acc:Q9LZ83]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.