Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, nucleus, vacuole
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- peroxisome 1
- nucleus 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G195400.1 | Wheat | cytosol, mitochondrion, nucleus, vacuole | 89.01 | 91.83 |
| TraesCS3B01G221000.2 | Wheat | cytosol, mitochondrion, nucleus, vacuole | 89.18 | 91.24 |
| TraesCS3A01G192200.1 | Wheat | cytosol, mitochondrion, nucleus, vacuole | 89.18 | 91.09 |
| Os01t0300900-01 | Rice | cytosol | 81.58 | 80.93 |
| EES00630 | Sorghum | cytosol | 77.71 | 78.47 |
| Zm00001d040606_P001 | Maize | cytosol | 75.61 | 75.48 |
| Zm00001d009123_P001 | Maize | cytosol | 74.47 | 73.76 |
| GSMUA_Achr8P29940_001 | Banana | cytosol | 63.33 | 62.22 |
| VIT_14s0060g01090.t01 | Wine grape | nucleus | 53.96 | 52.19 |
| KRG90521 | Soybean | peroxisome | 51.7 | 50.71 |
| KRH33805 | Soybean | nucleus | 51.7 | 50.71 |
| KRH68432 | Soybean | cytosol, nucleus, plastid | 49.27 | 48.11 |
| PGSC0003DMT400007146 | Potato | cytosol | 48.3 | 45.72 |
| KRG96716 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 49.43 | 42.68 |
| Solyc01g100600.2.1 | Tomato | cytosol | 31.18 | 38.68 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 12.92 | 24.46 |
| HORVU5Hr1G025310.1 | Barley | cytosol | 15.83 | 20.37 |
| HORVU5Hr1G117920.1 | Barley | cytosol | 16.8 | 19.89 |
| HORVU6Hr1G093000.5 | Barley | cytosol | 14.38 | 16.67 |
| HORVU5Hr1G117970.2 | Barley | plastid | 17.12 | 15.23 |
| HORVU5Hr1G025430.25 | Barley | mitochondrion | 16.96 | 15.02 |
| HORVU2Hr1G083780.14 | Barley | nucleus, plastid | 15.99 | 14.84 |
| HORVU4Hr1G032550.32 | Barley | mitochondrion | 16.16 | 14.6 |
| HORVU2Hr1G046680.19 | Barley | cytosol | 15.19 | 8.6 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G040720.1 | EnsemblPlantsGene:HORVU3Hr1G040720 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF417 | PFAM:PF13415 |
| PFAM:PF13418 | SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI000B47CE10 | UniProt:A0A287KV12 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:249678740..249682663
Molecular Weight (calculated)
66996.2 Da
IEP (calculated)
7.383
GRAVY (calculated)
-0.442
Length
619 amino acids
Sequence
(BLAST)
(BLAST)
001: MERRRKAMWL YPKVVGFNPP ERWGHSACFF QGLIYVFGGC CGGLHFSDVL TLNLETMAWS SLATKGETPG TRDSHGAALI GHRMFVFGGT NGNKKVNELH
101: VLDLRTKEWS KPPCKGTPPS PRESHTVTTA AGCDKLVIFG GSGEGDGNYL NDVHLLDVPT MTWTSPQVTG EVVPAPRDSH GAVTVGNGLF VYGGDCGDRY
201: HGEVDVLDMD TMAWSRFSVK GASPGVRAGH AALGIGSKIY VIGGVGDKQY YSDAWILDVV DRSWTQLETC GQQPQGRFSH SAVIMNTDIA IYGGCGEDER
301: PLNELLVLQL GSGHPNGLYN ISMSKILSNH WSQEKHKLLR AEHQKDTSAS NVELGRKPGE AEIEQRNPFL CGLENGHVKR RKTGDVGSNE MELEQEEHSL
401: SLSQHSSPSQ SEKDQEQNGA HIISGSPNGF IPAMQPLVRL NTNGSRRTSG GMSPRPLKTD QFLGDIAPQQ RHEMQFLTAE PKHHHRPSGP PLIGAEVHGT
501: IDGAFDSGYL VTAVVSGQLF RGVLFAPGPG VTAPRPVMHH QILNSSAIPP QQRPVLAHAY PVHARPVLQA TGFVRPDYSH HARRGFPSRV VKSESDRSSS
601: DLHHVVLTLG GPGGPGGGN
101: VLDLRTKEWS KPPCKGTPPS PRESHTVTTA AGCDKLVIFG GSGEGDGNYL NDVHLLDVPT MTWTSPQVTG EVVPAPRDSH GAVTVGNGLF VYGGDCGDRY
201: HGEVDVLDMD TMAWSRFSVK GASPGVRAGH AALGIGSKIY VIGGVGDKQY YSDAWILDVV DRSWTQLETC GQQPQGRFSH SAVIMNTDIA IYGGCGEDER
301: PLNELLVLQL GSGHPNGLYN ISMSKILSNH WSQEKHKLLR AEHQKDTSAS NVELGRKPGE AEIEQRNPFL CGLENGHVKR RKTGDVGSNE MELEQEEHSL
401: SLSQHSSPSQ SEKDQEQNGA HIISGSPNGF IPAMQPLVRL NTNGSRRTSG GMSPRPLKTD QFLGDIAPQQ RHEMQFLTAE PKHHHRPSGP PLIGAEVHGT
501: IDGAFDSGYL VTAVVSGQLF RGVLFAPGPG VTAPRPVMHH QILNSSAIPP QQRPVLAHAY PVHARPVLQA TGFVRPDYSH HARRGFPSRV VKSESDRSSS
601: DLHHVVLTLG GPGGPGGGN
001: MRWERVQQVG LGDSSSFGPG KRWGHTCNAI KGGRFLYVFG GFGRDNCLTN QVHVFDAETQ IWIRPEINGV PPCPRDSHSC TTVGDNLFVF GGTDGTKYLN
101: DVHILDTYSH TWIRPDIRGE GPRVREAHSA ALVDKRLFIF GGCGKSSDSD DEVFYNDLYI LNTETYMWKR AVTSGKPPSA RDSHTCSAWK NKIIVVGGED
201: LDDYYLSDVH ILDTDKFVWK ELKTSGQVLT PRAGHVTVAL ERNLFVFGGF TDSQNLYDDL YVLDLETGVW SKVVAMVEGP SARFSSAAVC LDPYKAGSFF
301: FVGGCNKNLE PLDDIYYLHT EGRYDVRFHQ NPGRSSLRKQ MKLKCQGQEL TVAKTNIDHG RENVPLNIGY IDQRKPMFQA RVTENAPLGY TIETIIDGKV
401: LRGVLFSNRH SSVRIADSSI SSRERPATSD GDCDHRAKIP RTFSKDPAGS SQQAGPTDPS DDTNKKVADS NDTDTPMIDT VDANVNMEGT HEAETAAVTI
501: DAKDQDASQL DKGIVNTDPL PVSHDQVNVI STDAAKADPG VDSSTRKQEE GTSAEEDANV GPQPQQH
101: DVHILDTYSH TWIRPDIRGE GPRVREAHSA ALVDKRLFIF GGCGKSSDSD DEVFYNDLYI LNTETYMWKR AVTSGKPPSA RDSHTCSAWK NKIIVVGGED
201: LDDYYLSDVH ILDTDKFVWK ELKTSGQVLT PRAGHVTVAL ERNLFVFGGF TDSQNLYDDL YVLDLETGVW SKVVAMVEGP SARFSSAAVC LDPYKAGSFF
301: FVGGCNKNLE PLDDIYYLHT EGRYDVRFHQ NPGRSSLRKQ MKLKCQGQEL TVAKTNIDHG RENVPLNIGY IDQRKPMFQA RVTENAPLGY TIETIIDGKV
401: LRGVLFSNRH SSVRIADSSI SSRERPATSD GDCDHRAKIP RTFSKDPAGS SQQAGPTDPS DDTNKKVADS NDTDTPMIDT VDANVNMEGT HEAETAAVTI
501: DAKDQDASQL DKGIVNTDPL PVSHDQVNVI STDAAKADPG VDSSTRKQEE GTSAEEDANV GPQPQQH
Arabidopsis Description
Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HTV1]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.