Factsheet for Zm00001d009123_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00630	Sorghum	cytosol	88.48	90.21
Zm00001d040606_P001	Maize	cytosol	86.08	86.77
Os01t0300900-01	Rice	cytosol	79.68	79.81
TraesCS3D01G195400.1	Wheat	cytosol, mitochondrion, nucleus, vacuole	73.92	77.0
TraesCS3A01G192200.1	Wheat	cytosol, mitochondrion, nucleus, vacuole	73.92	76.24
TraesCS3B01G221000.2	Wheat	cytosol, mitochondrion, nucleus, vacuole	73.76	76.2
HORVU3Hr1G040720.1	Barley	mitochondrion, nucleus, peroxisome, vacuole	73.76	74.47
GSMUA_Achr8P29940_001	Banana	cytosol	63.2	62.7
VIT_14s0060g01090.t01	Wine grape	nucleus	54.08	52.81
KRH33805	Soybean	nucleus	51.68	51.19
KRG90521	Soybean	peroxisome	51.52	51.03
KRH68432	Soybean	cytosol, nucleus, plastid	48.16	47.48
PGSC0003DMT400007146	Potato	cytosol	48.64	46.48
KRG96716	Soybean	endoplasmic reticulum, nucleus, plasma membrane	48.48	42.26
Solyc01g100600.2.1	Tomato	cytosol	31.84	39.88
Zm00001d037558_P001	Maize	cytosol	4.64	23.97
Zm00001d034759_P001	Maize	cytosol	17.44	21.8
Zm00001d019221_P001	Maize	cytosol	12.8	20.94
Zm00001d041692_P001	Maize	nucleus	16.64	19.15
Zm00001d031492_P001	Maize	cytosol	4.0	17.48
Zm00001d034758_P003	Maize	plastid	18.4	16.89
Zm00001d046434_P003	Maize	plastid	15.84	16.26
Zm00001d051876_P002	Maize	nucleus	14.72	15.49
Zm00001d048718_P010	Maize	mitochondrion	16.48	14.82
Zm00001d012892_P002	Maize	plastid	17.92	14.3
Zm00001d038406_P001	Maize	cytosol	4.96	14.22
Zm00001d003259_P006	Maize	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	15.04	13.24
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	15.04	12.29
Zm00001d021624_P002	Maize	mitochondrion	15.68	9.04

Protein Annotations

EntrezGene:100384701	Gene3D:2.120.10.80	MapMan:35.1	ProteinID:AQK91352.1	EMBL:BT083991	UniProt:C4IZJ4
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
PFAM:PF01344	PFAM:PF13415	PFAM:PF13418	PANTHER:PTHR23244	PANTHER:PTHR23244:SF417	SMART:SM00612
SUPFAM:SSF117281	UniParc:UPI0001A4C38C	EnsemblPlantsGene:Zm00001d009123	EnsemblPlants:Zm00001d009123_P001	EnsemblPlants:Zm00001d009123_T001	SEG:seg

Description

Galactose oxidase/kelch repeat superfamily protein

Coordinates

chr8:-:37790210..37794148

Molecular Weight (calculated)

67084.0 Da

IEP (calculated)

8.721

GRAVY (calculated)

-0.468

Length

625 amino acids

Sequence
(BLAST)

001: MERQRKAMWL YPKVVGFNPP ERWGHSACFF EGVVYVFGGC CGGLHFSDVV TLDVETMAWS ALATTGQRPG TRDSHGAALV GHRMLVFGGT NGGKKVNELH
101: VLDLRTREWS RPQCRGAAPS PRESHSVTVV GGDRLVVFGG SGEGEGNYLS DVHVLDVPTM TWSTPEAIRG GAPAPRDSHS AVAVGARLFV FGGDCGDRYH
201: GGVDVLDVDT MAWSRFPVKG ASPGVRAGHA ALSVGSKIYI IGGVGDKQYY SDVWVLDVAN RSWSQLEVSG QRPQGRFSHT AVVMNNDIAI YGGCGEDERP
301: LNELLILQLG SEHPNGRYNI STCKVLSNQW SQERRKFLQS ETKDTGASNG ETVQKRREAE IEQRNPFLRG LENSRAKRRK TDEARPSEAA ESEQQEEHSL
401: TLSQHSSPSQ SDQEQNGGGA HKLSPSPNAS VSALQPFARL KANDGAPSAP GRGGGGVSSR PALKTDQFLR TVAPQHHRQE VQFLSSDHKK PQPRPAPGPP
501: LIGAEVHGTI DGAFDSGYLM TAVVNGQLFR GVLFAPGPGV TAPRPTVHHQ ILTSSAMPPQ QRPLLAHAIP VHARPVPQAT GFVLPNCVHR ARQGFPAKAV
601: KSEPERGGSD LHDVVLTLGG PGGGK

Best Arabidopsis Sequence Match ( AT1G18610.2 )
(BLAST)

001: MRWERVRQLQ QQVGLGESSS GPGKRWGHTC NAIKGGSFLY VFGGYGRDNC QTNQVHVFDA AKQIWTQPMI NGTPPPPRDS HSCTTVGDNL FVFGGTDGVN
101: PLKDLYILDT SSHTWKCPSV RGEGPEAREG HSATLVGKRL FVFGGCGKSS GINEEIYYND VYIFNTETFV WKRAVTIGNP PSARDSHSCS SWKNKLVVIG
201: GEDGHDYYLS DVHILDTDTL IWKELNTSGQ LLTPRAGHVT VSLGRNFFVF GGFTDAQNLY DDLYVLDVDT CIWSKVLTMG EGPSARFSSA GACLDPHKAG
301: FLVIVGGCNK NLEALDDMFY LQTGLGYDAR FDQNVGMLSL KKQLKIKCQE QSHASSLYDK SLVRINMDHQ GRGNFGLNTC QFNEGKMMFQ ARITESYPVG
401: YTMETMIDGK VLRGVLFSNK RSSILPADQS FSRKRPAMSN GDQDNRSKIS RTLIKDQANA VESKDSQLNG MEAGIDTISN PLGVNITTVA VAPHETETSV
501: VTSDAKNQDA SQLDMGTVNT VNTAPSSVPQ VDEASLESRN AITIDDRANK TGLGES

Arabidopsis Description

F25I16.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9FZ82]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.