Factsheet for Zm00001d038406_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031492_P001	Maize	cytosol	39.45	60.14
Zm00001d037558_P001	Maize	cytosol	22.02	39.67
Zm00001d034759_P001	Maize	cytosol	41.74	18.2
Zm00001d019221_P001	Maize	cytosol	9.17	5.24
Zm00001d009123_P001	Maize	cytosol	14.22	4.96
Zm00001d041692_P001	Maize	nucleus	11.93	4.79
Zm00001d051876_P002	Maize	nucleus	12.84	4.71
Zm00001d040606_P001	Maize	cytosol	13.3	4.68
Zm00001d046434_P003	Maize	plastid	12.39	4.43
Zm00001d034758_P003	Maize	plastid	12.84	4.11
Zm00001d003259_P006	Maize	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	13.3	4.08
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	12.84	3.66
Zm00001d012892_P002	Maize	plastid	12.39	3.45
Zm00001d048718_P010	Maize	mitochondrion	10.55	3.31
Zm00001d021624_P002	Maize	mitochondrion	12.84	2.58

Protein Annotations

EnsemblPlants:Zm00001d038406_P001	EnsemblPlants:Zm00001d038406_T001	EnsemblPlantsGene:Zm00001d038406	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	PANTHER:PTHR23244	PANTHER:PTHR23244:SF405	PFAM:PF13418
ProteinID:AQK86573.1	SEG:seg	SUPFAM:SSF117281	UniParc:UPI0002207693	UniProt:A0A1D6M667	MapMan:35.1

Description

Galactose oxidase/kelch repeat superfamily protein

Coordinates

chr6:+:156420077..156424075

Molecular Weight (calculated)

24182.3 Da

IEP (calculated)

7.253

GRAVY (calculated)

-0.604

Length

218 amino acids

Sequence
(BLAST)

001: MPPRKHPSSS KKRKRRKGIE DFIESQKGVM DKFVRTNTKT SSNEDQPNFT IVVVVEQPNI NEEYHDPTLE ENVDINTNGN DVTGHEPIFD LSYVENGSFD
101: EYGHTAVIIS KSKVVVFGGF ANKRFLADVS VYDVENKLWY TPECTGNGSN GQAGPSPRAF HIAVVIDCNM FIFGGRSGGK RYVSNAVLIF DRRMVDHCEG
201: SGGVGRHGQT KAGQSHLQ

Best Arabidopsis Sequence Match ( AT2G36360.5 )
(BLAST)

001: MHHWVQASSS DFSGTPPQAR SGHTAVNVGK SMVVVFGGLV DKKFLSDIIV YDIENKLWFE PECTGSESEG QVGPTPRAFH VAITIDCHMF IFGGRSGGKR
101: LGDFWVLDTG TYMLTFAADI WQWSELTSFG DLPTPRDFAA AAAIGSQKIV LCGGWDGKKW LSDVYVMDTM SLEWLELSVS GSLPPPRCGH TATMVEKRLL
201: VFGGRGGGGP IMGDLWALKG LIDEERETPG WTQLKLPGQA PSSRCGHTVT SGGHYLLLFG GHGTGGWLSR YDVYYNDTII LDRVTAQWKR LPIGNEPPPP
301: RAYHTMTCIG ARHLLIGGFD GKLTFGDLWW LVPEDDPIAK RSSVPQVVNP PEIKESEREL DKLRVWSRQE RGQDGFSIVD LQQKMGISVS SGLRLQIPEE
401: SEDQEFVELG TRLIEGDVVD ERASMIQMAA QALRQHWKQS TPRTLQLKEL GSLLRDYQRL VTRIFTTQSS LTSADFGLPG TKTFTFYHIK SSSELRINDI
501: SKLLEEYKTL VI

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:TAIR;Acc:AT2G36360]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.