Factsheet for Zm00001d034759_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37190	Sorghum	cytosol	95.4	95.02
Os03t0835800-02	Rice	cytosol	85.0	84.83
TraesCS5B01G515900.1	Wheat	mitochondrion	84.8	84.29
TraesCS4A01G356300.1	Wheat	mitochondrion	84.4	83.9
TraesCS5D01G516000.1	Wheat	mitochondrion	83.2	81.25
HORVU5Hr1G117920.1	Barley	cytosol	84.6	80.88
Zm00001d037558_P001	Maize	cytosol	18.8	77.69
GSMUA_Achr8P07640_001	Banana	cytosol	74.4	74.55
CDX75043	Canola	cytosol	61.2	67.11
Bra040844.1-P	Field mustard	cytosol	17.8	66.92
PGSC0003DMT400050172	Potato	cytosol, mitochondrion, plastid	59.0	66.29
KRG92046	Soybean	cytosol	65.8	66.06
Solyc11g007320.1.1	Tomato	cytosol	65.6	65.47
CDX84132	Canola	cytosol	63.8	64.44
CDY67946	Canola	cytosol	45.0	64.1
CDX75048	Canola	cytosol, plastid	63.6	63.86
Bra005274.1-P	Field mustard	cytosol	47.6	63.81
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	45.6	62.47
Bra005279.1-P	Field mustard	cytosol	39.4	60.06
AT2G36360.4	Thale cress	cytosol	61.8	59.65
Zm00001d031492_P001	Maize	cytosol	17.0	59.44
VIT_13s0074g00620.t01	Wine grape	cytosol	64.0	57.55
Bra005272.1-P	Field mustard	cytosol	52.6	45.66
Zm00001d038406_P001	Maize	cytosol	18.2	41.74
CDX75045	Canola	cytosol	62.0	36.95
Zm00001d019221_P001	Maize	cytosol	14.4	18.85
Zm00001d009123_P001	Maize	cytosol	21.8	17.44
Zm00001d040606_P001	Maize	cytosol	21.4	17.26
Zm00001d041692_P001	Maize	nucleus	18.2	16.76
Zm00001d051876_P002	Maize	nucleus	18.8	15.82
Zm00001d048718_P010	Maize	mitochondrion	20.0	14.39
Zm00001d046434_P003	Maize	plastid	17.4	14.29
Zm00001d034758_P003	Maize	plastid	19.2	14.1
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	19.8	12.94
Zm00001d012892_P002	Maize	plastid	19.2	12.26
Zm00001d003259_P006	Maize	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	16.8	11.83
Zm00001d021624_P002	Maize	mitochondrion	19.2	8.86

Protein Annotations

EntrezGene:100384139	Gene3D:2.120.10.80	MapMan:35.1	EMBL:BT069267	UniProt:C0PLU8	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
ProteinID:ONM11185.1	ProteinID:ONM11187.1	PFAM:PF13415	PFAM:PF13418	PANTHER:PTHR23244	PANTHER:PTHR23244:SF401
SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF50965	UniParc:UPI000195D006	EnsemblPlantsGene:Zm00001d034759	EnsemblPlants:Zm00001d034759_P001
EnsemblPlants:Zm00001d034759_T001	:	:	:	:	:

Description

Galactose oxidase/kelch repeat superfamily protein

Coordinates

chr1:+:301498813..301507549

Molecular Weight (calculated)

55212.6 Da

IEP (calculated)

5.846

GRAVY (calculated)

-0.293

Length

500 amino acids

Sequence
(BLAST)

001: MQQLQPKQMH WVRADSSDFG GDRPAPRSGH TAVIIGKSKV VVFGGFADKR FLADVSVYDV ENKLWYTPEC TGNGSDGQAG PSPRAFHIAV VIDCNMFIFG
101: GRSGGKRLGD FWMLDTDLWQ WSEMTGFGDL PSPREFAAAS AIGNRKIVMY GGWDGKKWLS DVYIMDTMSL EWTELAVTGS VPPPRCGHSA TMIEKRLLIF
201: GGRGGAGPIM GDLWALKGIT EEDNEAPGWT QLKLPGQSPS PRCGHSVTSG GPYLLLFGGH GTGGWLSRYD VYYNECIILD RVSVQWKRLP TSNEPPPPRA
301: YHSITSIGSR FLLFGGFDGK NTFGDLWWLV PEDDPIAKRD LVPSIDSNSK PSTVTDDNQL LNLKESQALE NPITELAKRL GIALSEEVSA SFVDEANDKE
401: LVELSSRLAG QSLPASDQVA SIQVLRDHWK SSPASSLQLQ ELGPLLRDYQ RLILRHYTGN SLPAFREMEA LRFFHLKSAS QLRMDDIPVL LSEYGRLLST

Best Arabidopsis Sequence Match ( AT2G36360.1 )
(BLAST)

001: MHHWVQASSS DFSGTPPQAR SGHTAVNVGK SMVVVFGGLV DKKFLSDIIV YDIENKLWFE PECTGSESEG QVGPTPRAFH VAITIDCHMF IFGGRSGGKR
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFA AAAAIGSQKI VLCGGWDGKK WLSDVYVMDT MSLEWLELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSSRCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPIGNEPPP PRAYHTMTCI
301: GARHLLIGGF DGKLTFGDLW WLVPEDDPIA KRSSVPQVVN PPEIKESERE LDKERGQDGF SIVDLQQKMG ISVSSGLRLQ IPEESEDQEF VELGTRLIEG
401: DVVDERASMI QMAAQALRQH WKQSTPRTLQ LKELGSLLRD YQRLVTRIFT TQSSLTSADF GLPGTKTFTF YHIKSSSELR INDISKLLEE YKTLVI

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:TAIR;Acc:AT2G36360]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.