Factsheet for Bra005279.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040844.1-P	Field mustard	cytosol	34.45	84.96
Bra005274.1-P	Field mustard	cytosol	87.2	76.68
CDX75048	Canola	cytosol, plastid	98.17	64.66
AT2G36360.4	Thale cress	cytosol	89.94	56.95
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	60.37	54.25
Bra005272.1-P	Field mustard	cytosol	93.9	53.47
PGSC0003DMT400050172	Potato	cytosol, mitochondrion, plastid	62.8	46.29
Solyc11g007320.1.1	Tomato	cytosol	63.41	41.52
KRG92046	Soybean	cytosol	62.2	40.96
GSMUA_Achr8P07640_001	Banana	cytosol	60.98	40.08
Zm00001d034759_P001	Maize	cytosol	60.06	39.4
KXG37190	Sorghum	cytosol	60.06	39.24
TraesCS4A01G356300.1	Wheat	mitochondrion	59.76	38.97
Os03t0835800-02	Rice	cytosol	59.45	38.92
TraesCS5B01G515900.1	Wheat	mitochondrion	59.45	38.77
HORVU5Hr1G117920.1	Barley	cytosol	60.06	37.67
VIT_13s0074g00620.t01	Wine grape	cytosol	63.72	37.59
TraesCS5D01G516000.1	Wheat	mitochondrion	57.01	36.52
Bra037506.1-P	Field mustard	cytosol	13.11	13.35
Bra008135.1-P	Field mustard	mitochondrion, nucleus	17.68	11.86
Bra039702.1-P	Field mustard	cytosol	9.45	11.79
Bra029671.1-P	Field mustard	cytosol	4.27	11.57
Bra022157.1-P	Field mustard	cytosol	4.27	11.11
Bra016550.1-P	Field mustard	mitochondrion	17.68	11.07
Bra025672.1-P	Field mustard	nucleus	17.38	11.03
Bra037958.1-P	Field mustard	cytosol	8.23	10.27
Bra020713.1-P	Field mustard	cytosol	3.66	10.08
Bra018943.1-P	Field mustard	cytosol	6.1	9.95
Bra005805.1-P	Field mustard	cytosol	14.94	9.74
Bra040923.1-P	Field mustard	cytosol	14.33	9.23
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	17.68	8.7
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	17.38	8.55
Bra040219.1-P	Field mustard	cytosol	17.07	8.42
Bra039439.1-P	Field mustard	cytosol	17.07	8.4
Bra001147.1-P	Field mustard	cytosol	17.38	8.35
Bra002170.1-P	Field mustard	mitochondrion	15.55	7.29
Bra022159.1-P	Field mustard	cytosol	5.18	6.44
Bra000617.1-P	Field mustard	endoplasmic reticulum	18.6	6.4
Bra000803.1-P	Field mustard	cytosol	17.68	5.88
Bra018944.1-P	Field mustard	cytosol	13.41	5.56
Bra021175.1-P	Field mustard	cytosol	3.96	5.02

Protein Annotations

EnsemblPlants:Bra005279.1	EnsemblPlants:Bra005279.1-P	EnsemblPlantsGene:Bra005279	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR23244	PANTHER:PTHR23244:SF401
PFAM:PF13415	PFAM:PF13418	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI0002547C64	UniProt:M4CM42
MapMan:35.1	:	:	:	:	:

Description

AT2G36360 (E=2e-099) | kelch repeat-containing protein

Coordinates

chrA05:+:4510181..4513613

Molecular Weight (calculated)

36421.1 Da

IEP (calculated)

5.119

GRAVY (calculated)

-0.388

Length

328 amino acids

Sequence
(BLAST)

001: MHNWVRASSS DFTGTPPQPR SGHTAVNVGK SMVVVFGGLV DKKFLNDIIV YDIENKLWFE PECTGSVSEG KVGPTPRAFH VAITIDCHMF IFGGRSGGKR
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFS AAAAIGNQKI VLCGGWDGKK WLSDVYVMDT ITAQWKRLPI SNDEPPPPRA YHTMTSIVAR HLLIGGFDGK
201: STFGDLWWLV PEDDPIAKRS SVPQLRNPPE TKESERELDT QERGHDRSSI VDLQKKMGIS VSSGLRLQIP EESEDQEFVE LGTRLIEGDA VDNGASMIQM
301: AAEALRQHWK ESTPETLQLK ELGSIKGA

Best Arabidopsis Sequence Match ( AT2G36360.1 )
(BLAST)

001: MHHWVQASSS DFSGTPPQAR SGHTAVNVGK SMVVVFGGLV DKKFLSDIIV YDIENKLWFE PECTGSESEG QVGPTPRAFH VAITIDCHMF IFGGRSGGKR
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFA AAAAIGSQKI VLCGGWDGKK WLSDVYVMDT MSLEWLELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSSRCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPIGNEPPP PRAYHTMTCI
301: GARHLLIGGF DGKLTFGDLW WLVPEDDPIA KRSSVPQVVN PPEIKESERE LDKERGQDGF SIVDLQQKMG ISVSSGLRLQ IPEESEDQEF VELGTRLIEG
401: DVVDERASMI QMAAQALRQH WKQSTPRTLQ LKELGSLLRD YQRLVTRIFT TQSSLTSADF GLPGTKTFTF YHIKSSSELR INDISKLLEE YKTLVI

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:TAIR;Acc:AT2G36360]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.