Factsheet for Bra040845.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75043	Canola	cytosol	92.33	73.9
Bra005274.1-P	Field mustard	cytosol	67.12	65.68
Bra005279.1-P	Field mustard	cytosol	54.25	60.37
AT2G36360.4	Thale cress	cytosol	83.01	58.49
Bra005272.1-P	Field mustard	cytosol	86.3	54.69
KRG92046	Soybean	cytosol	66.58	48.8
Solyc11g007320.1.1	Tomato	cytosol	66.58	48.5
GSMUA_Achr8P07640_001	Banana	cytosol	65.21	47.7
PGSC0003DMT400050172	Potato	cytosol, mitochondrion, plastid	57.26	46.97
Bra040844.1-P	Field mustard	cytosol	16.71	45.86
Os03t0835800-02	Rice	cytosol	62.74	45.71
Zm00001d034759_P001	Maize	cytosol	62.47	45.6
KXG37190	Sorghum	cytosol	62.47	45.42
TraesCS5B01G515900.1	Wheat	mitochondrion	62.47	45.33
TraesCS4A01G356300.1	Wheat	mitochondrion	62.19	45.13
TraesCS5D01G516000.1	Wheat	mitochondrion	62.74	44.73
HORVU5Hr1G117920.1	Barley	cytosol	62.47	43.59
VIT_13s0074g00620.t01	Wine grape	cytosol	65.21	42.81
Bra029671.1-P	Field mustard	cytosol	5.21	15.7
Bra037506.1-P	Field mustard	cytosol	13.7	15.53
Bra039702.1-P	Field mustard	cytosol	10.68	14.83
Bra037958.1-P	Field mustard	cytosol	9.59	13.31
Bra005805.1-P	Field mustard	cytosol	16.99	12.33
Bra008135.1-P	Field mustard	mitochondrion, nucleus	16.16	12.07
Bra025672.1-P	Field mustard	nucleus	16.71	11.8
Bra016550.1-P	Field mustard	mitochondrion	16.71	11.64
Bra020713.1-P	Field mustard	cytosol	3.56	10.92
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	19.73	10.79
Bra040219.1-P	Field mustard	cytosol	19.45	10.68
Bra040923.1-P	Field mustard	cytosol	14.79	10.61
Bra001147.1-P	Field mustard	cytosol	19.45	10.4
Bra039439.1-P	Field mustard	cytosol	18.63	10.19
Bra002170.1-P	Field mustard	mitochondrion	18.63	9.71
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	16.99	9.3
Bra022157.1-P	Field mustard	cytosol	3.01	8.73
Bra000803.1-P	Field mustard	cytosol	18.63	6.89
Bra000617.1-P	Field mustard	endoplasmic reticulum	17.81	6.82
Bra021175.1-P	Field mustard	cytosol	4.66	6.56
Bra018943.1-P	Field mustard	cytosol	3.56	6.47
Bra018944.1-P	Field mustard	cytosol	13.97	6.44
Bra022159.1-P	Field mustard	cytosol	3.84	5.3

Protein Annotations

EnsemblPlants:Bra040845.1	EnsemblPlants:Bra040845.1-P	EnsemblPlantsGene:Bra040845	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR23244	PANTHER:PTHR23244:SF401
PFAM:PF13415	PFAM:PF13418	SEG:seg	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI000253E968
UniProt:M4FIB6	MapMan:35.1	:	:	:	:

Description

AT2G36360 (E=1e-080) | kelch repeat-containing protein

Coordinates

chrScaffold000277:+:34043..37383

Molecular Weight (calculated)

40579.5 Da

IEP (calculated)

6.427

GRAVY (calculated)

-0.319

Length

365 amino acids

Sequence
(BLAST)

001: MHNWVRASSS DLTGAPPQPR SGHTAVNVGE SMVVVFGGLV DKKFLNDIIV YDIDIWQWSE LTSFGDLPTP RDFSAAAAIG NQKIVLCGGW DGKKWLSDVY
101: VMDTMSLEWM ELSVSGSLPP PRCGHTATMV EKRLLVFGGR GGGGPIMGDL WALKGLIDEE RETPGWTQLK LPGQAPSARC GHTVTSGGHY VCLFQLPFAL
201: FGSAYRRLPI SNDEPPPPRA YHTMTSIGAR HLLIGGFDGK STFGDLWWLV PEDDPIAKRS SVPQLRNPPE TKESERDLDT MAAEALRQHW KESTPETLQL
301: KELNALLRDY QRLVTRKYTA QSSLTSTDFG LPGKQTFTFY HIKTSSELRM DDIPKLLEEY KTLVI

Best Arabidopsis Sequence Match ( AT2G36360.1 )
(BLAST)

001: MHHWVQASSS DFSGTPPQAR SGHTAVNVGK SMVVVFGGLV DKKFLSDIIV YDIENKLWFE PECTGSESEG QVGPTPRAFH VAITIDCHMF IFGGRSGGKR
101: LGDFWVLDTD IWQWSELTSF GDLPTPRDFA AAAAIGSQKI VLCGGWDGKK WLSDVYVMDT MSLEWLELSV SGSLPPPRCG HTATMVEKRL LVFGGRGGGG
201: PIMGDLWALK GLIDEERETP GWTQLKLPGQ APSSRCGHTV TSGGHYLLLF GGHGTGGWLS RYDVYYNDTI ILDRVTAQWK RLPIGNEPPP PRAYHTMTCI
301: GARHLLIGGF DGKLTFGDLW WLVPEDDPIA KRSSVPQVVN PPEIKESERE LDKERGQDGF SIVDLQQKMG ISVSSGLRLQ IPEESEDQEF VELGTRLIEG
401: DVVDERASMI QMAAQALRQH WKQSTPRTLQ LKELGSLLRD YQRLVTRIFT TQSSLTSADF GLPGTKTFTF YHIKSSSELR INDISKLLEE YKTLVI

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:TAIR;Acc:AT2G36360]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.