Factsheet for Bra020713.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2
cytosol 3
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400046550	Potato	cytosol	49.58	52.21
Bra029671.1-P	Field mustard	cytosol	52.94	52.07
CDY48738	Canola	cytosol	100.0	36.96
CDY05697	Canola	cytosol	99.16	36.65
Bra037506.1-P	Field mustard	cytosol	88.24	32.61
AT5G48180.1	Thale cress	cytosol	81.51	29.75
Bra022157.1-P	Field mustard	cytosol	26.05	24.6
KRH43755	Soybean	cytosol	56.3	20.43
Solyc05g024410.2.1	Tomato	cytosol, extracellular, plastid	52.94	19.33
Bra039702.1-P	Field mustard	cytosol	42.02	19.01
KXG34722	Sorghum	cytosol	53.78	18.99
Os09t0249000-01	Rice	cytosol, plasma membrane, plastid	52.94	18.98
Bra037958.1-P	Field mustard	cytosol	41.18	18.63
Bra021175.1-P	Field mustard	cytosol	40.34	18.53
VIT_12s0057g01080.t01	Wine grape	cytosol	50.42	18.35
TraesCS5B01G165000.1	Wheat	mitochondrion	49.58	18.04
HORVU5Hr1G051310.1	Barley	cytosol, mitochondrion, peroxisome	48.74	17.74
TraesCS5D01G172400.1	Wheat	mitochondrion	48.74	17.74
TraesCS5A01G168200.1	Wheat	mitochondrion	47.9	17.43
Zm00001d019221_P001	Maize	cytosol	52.1	16.23
Bra022159.1-P	Field mustard	cytosol	29.41	13.26
Bra040923.1-P	Field mustard	cytosol	43.7	10.22
Bra018944.1-P	Field mustard	cytosol	42.02	6.31
Bra025672.1-P	Field mustard	nucleus	23.53	5.42
Bra016550.1-P	Field mustard	mitochondrion	23.53	5.34
Bra039439.1-P	Field mustard	cytosol	23.53	4.2
Bra005805.1-P	Field mustard	cytosol	17.65	4.17
Bra001147.1-P	Field mustard	cytosol	23.53	4.1
Bra008135.1-P	Field mustard	mitochondrion, nucleus	16.81	4.09
Bra040219.1-P	Field mustard	cytosol	22.69	4.06
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	21.01	3.75
Bra005279.1-P	Field mustard	cytosol	10.08	3.66
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	10.92	3.56
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	18.49	3.3
Bra005274.1-P	Field mustard	cytosol	10.08	3.22
Bra040844.1-P	Field mustard	cytosol	3.36	3.01
Bra002170.1-P	Field mustard	mitochondrion	13.45	2.29
Bra000803.1-P	Field mustard	cytosol	18.49	2.23
Bra000617.1-P	Field mustard	endoplasmic reticulum	16.81	2.1
Bra005272.1-P	Field mustard	cytosol	10.08	2.08
Bra018943.1-P	Field mustard	cytosol	1.68	1.0

Protein Annotations

EnsemblPlants:Bra020713.1	EnsemblPlants:Bra020713.1-P	EnsemblPlantsGene:Bra020713	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	SUPFAM:SSF50965	UniParc:UPI0002546150
UniProt:M4DW19	MapMan:35.1	:	:	:	:

Description

AT5G48180 (E=2e-050) NSP5 | NSP5 (NITRILE SPECIFIER PROTEIN 5)

Coordinates

chrA02:-:23581794..23582846

Molecular Weight (calculated)

13115.5 Da

IEP (calculated)

4.800

GRAVY (calculated)

-0.453

Length

119 amino acids

Sequence
(BLAST)

001: MSPVAENKWV KTTGDVPPAR SVFPAVRSGK EIVVYGGEEE PHELMHMGAG KLSGEVYRLD TETLVWEKVV DGTEEGKKPS PRGWCAFAVA VKDGEEGLLV
101: HGGNSPTNER LDDMVFWRF

Best Arabidopsis Sequence Match ( AT5G48180.1 )
(BLAST)

001: MCPVENKWLK VGQKGAGPGA RSSHAMTVVG NKVYCFGGEL KPTIHIDNDL YVFDLETQEW SIAPATGEAP FPCFGVSMVT IGSTIYVYGG RDDKRRYNGL
101: HSYDTETNEW KLLAPVEEGL PGRSYHSMAG DDRKVYVFGG VTAKGRVNTL HAYDVVDQKW VEYPAAGEAC KGRGAPGLVV VEGRIWVLFG FDGNELGDIH
201: CFDLASEQWK AVETTGDVPA ARSVFPAVSY GKYIVIYGGE EEPHELMHMG AGKMSGEVYQ LDTETLVWER IVCGNEEEKP SQRGWCAFTK AVKDGEEGLL
301: VHGGNSPTNE RLDDLVFWGF SHLNVN

Arabidopsis Description

NSP5Nitrile-specifier protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q93XW5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.