Factsheet for Bra021175.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022159.1-P	Field mustard	cytosol	71.81	70.45
CDY20194	Canola	cytosol	99.61	55.25
CDY28366	Canola	cytosol	97.68	54.18
Bra022157.1-P	Field mustard	cytosol	25.48	52.38
Bra029671.1-P	Field mustard	cytosol	20.85	44.63
CDY56199	Canola	cytosol	67.18	42.13
AT3G16400.1	Thale cress	cytosol	75.68	41.7
AT3G16390.2	Thale cress	cytosol	74.52	41.33
Bra020713.1-P	Field mustard	cytosol	18.53	40.34
PGSC0003DMT400046550	Potato	cytosol	16.99	38.94
Bra040923.1-P	Field mustard	cytosol	76.06	38.7
CDY30169	Canola	cytosol	39.0	31.27
AT3G16410.1	Thale cress	cytosol	73.75	30.86
Bra039702.1-P	Field mustard	cytosol	26.25	25.86
Bra037958.1-P	Field mustard	cytosol	23.94	23.57
Bra018944.1-P	Field mustard	cytosol	52.51	17.17
Os09t0249000-01	Rice	cytosol, plasma membrane, plastid	20.85	16.27
Zm00001d019221_P001	Maize	cytosol	23.94	16.23
Solyc05g024410.2.1	Tomato	cytosol, extracellular, plastid	20.08	15.95
KXG34722	Sorghum	cytosol	20.08	15.43
Bra037506.1-P	Field mustard	cytosol	18.92	15.22
VIT_12s0057g01080.t01	Wine grape	cytosol	18.92	14.98
HORVU5Hr1G051310.1	Barley	cytosol, mitochondrion, peroxisome	18.92	14.98
KRH43755	Soybean	cytosol	18.92	14.94
TraesCS5D01G172400.1	Wheat	mitochondrion	18.53	14.68
TraesCS5A01G168200.1	Wheat	mitochondrion	18.15	14.37
TraesCS5B01G165000.1	Wheat	mitochondrion	18.15	14.37
Bra040219.1-P	Field mustard	cytosol	15.06	5.86
Bra039439.1-P	Field mustard	cytosol	14.67	5.7
Bra001147.1-P	Field mustard	cytosol	14.29	5.42
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	13.9	5.4
Bra005805.1-P	Field mustard	cytosol	9.65	4.97
Bra040845.1-P	Field mustard	cytosol, peroxisome, plastid	6.56	4.66
Bra025672.1-P	Field mustard	nucleus	8.49	4.26
Bra002170.1-P	Field mustard	mitochondrion	11.2	4.14
Bra016550.1-P	Field mustard	mitochondrion	8.11	4.01
Bra005279.1-P	Field mustard	cytosol	5.02	3.96
Bra018943.1-P	Field mustard	cytosol	2.7	3.48
Bra008135.1-P	Field mustard	mitochondrion, nucleus	6.18	3.27
Bra005274.1-P	Field mustard	cytosol	4.63	3.22
Bra000617.1-P	Field mustard	endoplasmic reticulum	10.04	2.73
Bra015931.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	6.95	2.7
Bra000803.1-P	Field mustard	cytosol	10.04	2.63
Bra005272.1-P	Field mustard	cytosol	5.02	2.26
Bra040844.1-P	Field mustard	cytosol	0.77	1.5

Protein Annotations

Gene3D:2.100.10.30	MapMan:35.1	EnsemblPlantsGene:Bra021175	EnsemblPlants:Bra021175.1	EnsemblPlants:Bra021175.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0030246	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR001229	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom
InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	UniProt:M4DXC9	PFAM:PF01419	PFscan:PS51752	PANTHER:PTHR23244
PANTHER:PTHR23244:SF208	SMART:SM00915	SUPFAM:SSF50965	SUPFAM:SSF51101	UniParc:UPI0002543BC6	SEG:seg

Description

AT3G16400 (E=8e-053) ATMLP-470, NSP1, ATNSP1 | NSP1 (NITRILE SPECIFIER PROTEIN 1)

Coordinates

chrA01:-:23563930..23565676

Molecular Weight (calculated)

28184.4 Da

IEP (calculated)

6.244

GRAVY (calculated)

-0.343

Length

259 amino acids

Sequence
(BLAST)

001: MAQKLEAKGG KKGGVWDDGV HDGIRKIYVG QGQDCIAFVK FEYVDGSEVV VGNEHGKKTL LGTEEFEVDA DDYLIYVEAF RDKATEETIV DLKFETYKGK
101: TNKHIETSPG VKFVLHGGKI IGFHGRSSDV LHSLGAYVTF PSTPKLQGKW IKKPSARSVF ASAVVGKHIV IFGGEVAMDP QAHVGPGQLI GGTFALDTET
201: LKWERLDKLG EDEETPDIRG WSASTSGTID GKKGLVMHGG KAQTNGRFDD LFFYGIESA

Best Arabidopsis Sequence Match ( AT2G33070.2 )
(BLAST)

001: MVQKVEARGG EIGDVWDDGA YDGVRKVYVG QGEDGIAFVK FEYVNGSQEV VGDERGKKTL LGAEEFEVDP DDYIVYVEGY HEKVFGVTTK EIISTLTFKT
101: YKGKTSPPFG IVSGTKFVLQ GGKIVGFHGR STDVLHSLGA YISSPATPKL RGKWIKVEQK GEGPGPRCSH DIAQVGNKIF SFGGELTPNQ PIDKHLYVFD
201: LETRTWSISP ATGDVPNLSC LGVRMVSIGS SLYVFGGRDA SRKYNGFYSF DTTKNEWKLL TPVEQGPTPR SFHSMTADEN NVYVFGGVSA TVRLKTLDAY
301: NIVDHKWVQC STPGGSCSVR GGAGLEVVQG KVWVVYGFNG CEVDDVHCYD PAQDKWTQVE TFGEKPCARS VFASAVVGKH ILVFGGEIAM DPKAHEGPGQ
401: LSGGTFALDT ETLKWEKLDK LGEEEETPSI RGWSASTTGT IDGKKGLVMF GGKAQTNDRF GDLFFYGVDS A

Arabidopsis Description

NSP2nitrile specifier protein 2 [Source:TAIR;Acc:AT2G33070]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.