Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G16400.1 | Thale cress | cytosol | 70.92 | 93.4 |
| AT3G16390.2 | Thale cress | cytosol | 65.11 | 86.3 |
| AT2G33070.3 | Thale cress | cytosol | 60.9 | 79.7 |
| CDY30169 | Canola | cytosol | 41.36 | 79.26 |
| CDY20194 | Canola | cytosol | 59.29 | 78.59 |
| CDY56199 | Canola | cytosol | 52.34 | 78.45 |
| CDY28366 | Canola | cytosol | 58.97 | 78.16 |
| CDX92073 | Canola | cytosol | 58.97 | 77.33 |
| CDY03963 | Canola | cytosol | 57.35 | 76.02 |
| Bra021175.1-P | Field mustard | cytosol | 30.86 | 73.75 |
| CDY03958 | Canola | cytosol | 55.09 | 73.18 |
| CDY56200 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 51.21 | 68.47 |
| Bra022159.1-P | Field mustard | cytosol | 28.92 | 67.8 |
| Bra040923.1-P | Field mustard | cytosol | 54.12 | 65.82 |
| AT1G54040.2 | Thale cress | cytosol | 29.73 | 53.96 |
| AT5G48180.1 | Thale cress | cytosol | 26.98 | 51.23 |
| Bra022157.1-P | Field mustard | cytosol | 10.34 | 50.79 |
| AT3G07720.1 | Thale cress | cytosol | 26.49 | 49.85 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 25.69 | 48.77 |
| Os09t0249000-01 | Rice | cytosol, plasma membrane, plastid | 25.69 | 47.89 |
| KRH43755 | Soybean | cytosol | 25.36 | 47.87 |
| KXG34722 | Sorghum | cytosol | 25.36 | 46.59 |
| VIT_12s0057g01080.t01 | Wine grape | cytosol | 24.23 | 45.87 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 24.07 | 45.57 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 23.91 | 45.26 |
| TraesCS5A01G168200.1 | Wheat | mitochondrion | 23.75 | 44.95 |
| TraesCS5B01G165000.1 | Wheat | mitochondrion | 23.59 | 44.65 |
| Zm00001d019221_P001 | Maize | cytosol | 26.01 | 42.15 |
| PGSC0003DMT400046550 | Potato | cytosol | 7.59 | 41.59 |
| AT2G36360.4 | Thale cress | cytosol | 11.95 | 14.29 |
| AT5G04420.3 | Thale cress | cytosol | 11.63 | 14.01 |
| AT3G05420.2 | Thale cress | cytosol | 14.7 | 13.6 |
| AT1G18610.2 | Thale cress | cytosol | 11.95 | 13.31 |
| AT5G27630.3 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 14.22 | 13.17 |
| AT1G74150.1 | Thale cress | cytosol, mitochondrion | 11.47 | 12.48 |
| AT5G18590.1 | Thale cress | mitochondrion | 13.89 | 12.15 |
| AT5G50310.1 | Thale cress | nucleus | 12.6 | 11.71 |
| AT4G04670.1 | Thale cress | cytosol | 10.18 | 6.33 |
Protein Annotations
| Gene3D:2.100.10.30 | Gene3D:2.120.10.80 | EntrezGene:820888 | MapMan:9.5.2.2 | ProteinID:AAB63637.1 | ProteinID:AEE75809.1 |
| EMBL:AK228139 | ArrayExpress:AT3G16410 | EnsemblPlantsGene:AT3G16410 | RefSeq:AT3G16410 | TAIR:AT3G16410 | RefSeq:AT3G16410-TAIR-G |
| EnsemblPlants:AT3G16410.1 | TAIR:AT3G16410.1 | ProteinID:BAB01139.1 | EMBL:BT023445 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 |
| GO:GO:0009506 | GO:GO:0009987 | GO:GO:0019748 | GO:GO:0019762 | GO:GO:0030246 | GO:GO:0080028 |
| InterPro:IPR001229 | InterPro:IPR015915 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf |
| InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | RefSeq:NP_188262.1 | Symbol:NSP4 | UniProt:O04316 | PFAM:PF01344 |
| PFAM:PF01419 | PFAM:PF13415 | PO:PO:0000293 | PFscan:PS51752 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 |
| SMART:SM00612 | SMART:SM00915 | SUPFAM:SSF117281 | SUPFAM:SSF51101 | UniParc:UPI00000AB25A | SEG:seg |
Description
NSP4Nitrile-specifier protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O04316]
Coordinates
chr3:+:5571903..5574758
Molecular Weight (calculated)
67608.0 Da
IEP (calculated)
4.764
GRAVY (calculated)
-0.365
Length
619 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQKVEAQGG NGGNQWDDGS EYDAVTKIQV AAGGNGIEYV KFTYVKNGQT EEAPLRGVKG RSFEADPFVI NHPEEHLVSV EGRYNPEGLI LGLTFKSNKK
101: TSDLIGYEDG TPFTLQVQDK KIVGFYGFAG NNLHSLGAYF APLTNVTPLN AKKLEAKGGD TGDIWDDGVY DNVRKVYVGQ AQYGIAFVKF EYVNGSQVVV
201: GDEHGKKTEL GVEEFEIDAD DYIVYVEGYR EKVNGMTSEM ITFLSFKTYK GKTSQPIEQR PGIKFVLQGG KIVGFHGRST DVLDSLGAYI SLSPTPNLHG
301: KWTKVDENGD GPGLRCSHDI AQVGNKIYSF GGEFTPNQPI DKHLYVFDIE SRTWSISPAT GDIPTLSCLG VCMVSIGSTL YVFGGRDASR QYNGFYSFDT
401: TTNEWKLLTP VEEGPTPRSF HSMAADEENV YVFGGVSATA RLNTLDSYNI VDKKWFHCST PGDSLTARGG AGLEVVQGKV WVVYGFNGCE VDDVHYYDPV
501: QDKWTQVETF GVRPSERSVF ASAALGKHIV IFGGEIAMDP LAHVGPGQLT DGTFALDTET LQWERLDKFG GEEETPSSRG WTASTTATIG GKKGLVMHGG
601: KAPTNDRFDD LFFYGIDSA
101: TSDLIGYEDG TPFTLQVQDK KIVGFYGFAG NNLHSLGAYF APLTNVTPLN AKKLEAKGGD TGDIWDDGVY DNVRKVYVGQ AQYGIAFVKF EYVNGSQVVV
201: GDEHGKKTEL GVEEFEIDAD DYIVYVEGYR EKVNGMTSEM ITFLSFKTYK GKTSQPIEQR PGIKFVLQGG KIVGFHGRST DVLDSLGAYI SLSPTPNLHG
301: KWTKVDENGD GPGLRCSHDI AQVGNKIYSF GGEFTPNQPI DKHLYVFDIE SRTWSISPAT GDIPTLSCLG VCMVSIGSTL YVFGGRDASR QYNGFYSFDT
401: TTNEWKLLTP VEEGPTPRSF HSMAADEENV YVFGGVSATA RLNTLDSYNI VDKKWFHCST PGDSLTARGG AGLEVVQGKV WVVYGFNGCE VDDVHYYDPV
501: QDKWTQVETF GVRPSERSVF ASAALGKHIV IFGGEIAMDP LAHVGPGQLT DGTFALDTET LQWERLDKFG GEEETPSSRG WTASTTATIG GKKGLVMHGG
601: KAPTNDRFDD LFFYGIDSA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.