Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G16400.1 | Thale cress | cytosol | 80.76 | 81.28 |
| AT3G16390.2 | Thale cress | cytosol | 78.44 | 79.44 |
| AT3G16410.1 | Thale cress | cytosol | 79.7 | 60.9 |
| AT1G54040.2 | Thale cress | cytosol | 40.59 | 56.3 |
| AT3G07720.1 | Thale cress | cytosol | 36.36 | 52.28 |
| AT5G48180.1 | Thale cress | cytosol | 35.52 | 51.53 |
| KRH43755 | Soybean | cytosol | 34.25 | 49.39 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 34.04 | 49.39 |
| Os09t0249000-01 | Rice | cytosol, plasma membrane, plastid | 34.25 | 48.8 |
| VIT_12s0057g01080.t01 | Wine grape | cytosol | 32.98 | 47.71 |
| KXG34722 | Sorghum | cytosol | 33.83 | 47.48 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 32.56 | 47.09 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 32.56 | 47.09 |
| TraesCS5B01G165000.1 | Wheat | mitochondrion | 32.35 | 46.79 |
| TraesCS5A01G168200.1 | Wheat | mitochondrion | 32.14 | 46.48 |
| PGSC0003DMT400046550 | Potato | cytosol | 10.78 | 45.13 |
| Zm00001d019221_P001 | Maize | cytosol | 35.31 | 43.72 |
| AT1G18610.2 | Thale cress | cytosol | 16.28 | 13.85 |
| AT5G04420.3 | Thale cress | cytosol | 15.01 | 13.81 |
| AT2G36360.4 | Thale cress | cytosol | 14.59 | 13.32 |
| AT1G74150.1 | Thale cress | cytosol, mitochondrion | 15.86 | 13.18 |
| AT5G27630.3 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 18.39 | 13.02 |
| AT3G05420.2 | Thale cress | cytosol | 18.39 | 13.0 |
| AT5G18590.1 | Thale cress | mitochondrion | 17.12 | 11.44 |
| AT5G50310.1 | Thale cress | nucleus | 16.07 | 11.41 |
| AT4G04670.1 | Thale cress | cytosol | 13.11 | 6.23 |
Protein Annotations
| Gene3D:2.100.10.30 | Gene3D:2.120.10.80 | EntrezGene:817869 | MapMan:9.5.2.2 | ProteinID:AEC08782.1 | ArrayExpress:AT2G33070 |
| EnsemblPlantsGene:AT2G33070 | RefSeq:AT2G33070 | TAIR:AT2G33070 | RefSeq:AT2G33070-TAIR-G | EnsemblPlants:AT2G33070.3 | TAIR:AT2G33070.3 |
| Unigene:At.28407 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0030246 | InterPro:IPR001229 |
| InterPro:IPR015915 | InterPro:IPR036404 | InterPro:Jacalin-like_lectin_dom | InterPro:Jacalin-like_lectin_dom_plant | InterPro:Jacalin-like_lectin_dom_sf | InterPro:Kelch-typ_b-propeller |
| InterPro:Kelch_1 | RefSeq:NP_001189663.1 | Symbol:NSP2 | PFAM:PF01344 | PFAM:PF01419 | PFAM:PF13415 |
| PO:PO:0007611 | PO:PO:0009005 | PO:PO:0009010 | PO:PO:0009046 | PO:PO:0020100 | PO:PO:0020137 |
| PFscan:PS51752 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF208 | SMART:SM00612 | SMART:SM00915 | SUPFAM:SSF117281 |
| SUPFAM:SSF51101 | UniParc:UPI0001E92CEB | : | : | : | : |
Description
NSP2nitrile specifier protein 2 [Source:TAIR;Acc:AT2G33070]
Coordinates
chr2:-:14028282..14031164
Molecular Weight (calculated)
51415.6 Da
IEP (calculated)
5.503
GRAVY (calculated)
-0.295
Length
473 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQKVEARGG EIGDVWDDGA YDGVRKVYVG QGEDGIAFVK FEYVNGSQEV VGDERGKKTL LGAEEFEVDP DDYIVYVEGY HEKVFGVTTK EIISTLTFKT
101: YKGKTSPPFG IVSGTKFVLQ GGKIVGFHGR STDVLHSLGA YISSPATPKL RGKWIKVVVE QKGEGPGPRC SHDIAQVGNK IFSFGGELTP NQPIDKHLYV
201: FDLETRTWSI SPATGDVPNL SCLGVRMVSI GSSLYVFGGR DASRKYNGFY SFDTTKNEWK LLTPVEQGPT PRSFHSMTAD ENNVYVFGGV SATVRLKTLD
301: AYNIVDHKWV QCSTPGGSCS VRGGAGLEVV QGKVWVVYGF NGCEVDDVHC YDPAQDKWTQ VETFGEKPCA RSVFASAVVG KHILVFGGEI AMDPKAHEGP
401: GQLSGGTFAL DTETLKWEKL DKLGEEEETP SIRGWSASTT GTIDGKKGLV MFGGKAQTND RFGDLFFYGV DSA
101: YKGKTSPPFG IVSGTKFVLQ GGKIVGFHGR STDVLHSLGA YISSPATPKL RGKWIKVVVE QKGEGPGPRC SHDIAQVGNK IFSFGGELTP NQPIDKHLYV
201: FDLETRTWSI SPATGDVPNL SCLGVRMVSI GSSLYVFGGR DASRKYNGFY SFDTTKNEWK LLTPVEQGPT PRSFHSMTAD ENNVYVFGGV SATVRLKTLD
301: AYNIVDHKWV QCSTPGGSCS VRGGAGLEVV QGKVWVVYGF NGCEVDDVHC YDPAQDKWTQ VETFGEKPCA RSVFASAVVG KHILVFGGEI AMDPKAHEGP
401: GQLSGGTFAL DTETLKWEKL DKLGEEEETP SIRGWSASTT GTIDGKKGLV MFGGKAQTND RFGDLFFYGV DSA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.