Factsheet for AT3G16390.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

endoplasmic reticulum 1
golgi 1
extracellular 1
cytosol 2
nucleus 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G16400.1	Thale cress	cytosol	90.15	89.57
CDY30169	Canola	cytosol	55.46	80.19
CDY28366	Canola	cytosol	79.02	79.02
CDY20194	Canola	cytosol	78.8	78.8
CDX92073	Canola	cytosol	79.44	78.6
AT2G33070.3	Thale cress	cytosol	79.44	78.44
CDY56199	Canola	cytosol	68.95	77.97
CDY03963	Canola	cytosol	75.16	75.16
Bra021175.1-P	Field mustard	cytosol	41.33	74.52
CDY03958	Canola	cytosol	72.16	72.32
Bra022159.1-P	Field mustard	cytosol	38.97	68.94
CDY56200	Canola	endoplasmic reticulum, extracellular, plasma membrane	67.67	68.25
Bra040923.1-P	Field mustard	cytosol	71.09	65.23
AT3G16410.1	Thale cress	cytosol	86.3	65.11
AT1G54040.2	Thale cress	cytosol	40.47	55.43
AT5G48180.1	Thale cress	cytosol	35.33	50.61
AT3G07720.1	Thale cress	cytosol	34.9	49.54
Solyc05g024410.2.1	Tomato	cytosol, extracellular, plastid	33.83	48.47
KXG34722	Sorghum	cytosol	34.48	47.77
VIT_12s0057g01080.t01	Wine grape	cytosol	33.4	47.71
Os09t0249000-01	Rice	cytosol, plasma membrane, plastid	33.83	47.59
KRH43755	Soybean	cytosol	33.19	47.26
Bra022157.1-P	Field mustard	cytosol	12.63	46.83
TraesCS5D01G172400.1	Wheat	mitochondrion	32.12	45.87
HORVU5Hr1G051310.1	Barley	cytosol, mitochondrion, peroxisome	32.12	45.87
TraesCS5A01G168200.1	Wheat	mitochondrion	31.69	45.26
TraesCS5B01G165000.1	Wheat	mitochondrion	31.48	44.95
PGSC0003DMT400046550	Potato	cytosol	10.49	43.36
Zm00001d019221_P001	Maize	cytosol	35.33	43.19
AT5G04420.3	Thale cress	cytosol	14.99	13.62
AT1G18610.2	Thale cress	cytosol	15.85	13.31
AT2G36360.4	Thale cress	cytosol	14.56	13.13
AT1G74150.1	Thale cress	cytosol, mitochondrion	15.42	12.65
AT3G05420.2	Thale cress	cytosol	17.77	12.41
AT5G27630.3	Thale cress	cytosol, mitochondrion, nucleus, plastid	17.56	12.28
AT5G18590.1	Thale cress	mitochondrion	16.92	11.16
AT5G50310.1	Thale cress	nucleus	15.63	10.96
AT4G04670.1	Thale cress	cytosol	12.85	6.03

Protein Annotations

Gene3D:2.100.10.30	Gene3D:2.120.10.80	EntrezGene:820886	MapMan:9.5.2.2	ProteinID:AAB63639.1	ProteinID:AEE75806.1
EMBL:AK118502	ProteinID:ANM65032.1	ArrayExpress:AT3G16390	EnsemblPlantsGene:AT3G16390	RefSeq:AT3G16390	TAIR:AT3G16390
RefSeq:AT3G16390-TAIR-G	EnsemblPlants:AT3G16390.2	Unigene:At.66561	ProteinID:BAB01137.1	EMBL:BT004661	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0019748	GO:GO:0019762	GO:GO:0030246	GO:GO:0080028	InterPro:IPR001229
InterPro:IPR015915	InterPro:IPR036404	InterPro:Jacalin-like_lectin_dom	InterPro:Jacalin-like_lectin_dom_plant	InterPro:Jacalin-like_lectin_dom_sf	InterPro:Kelch-typ_b-propeller
InterPro:Kelch_1	RefSeq:NP_001327031.1	RefSeq:NP_566545.1	InterPro:NSP1/2/3	Symbol:NSP3	UniProt:O04318
PFAM:PF01344	PFAM:PF01419	PFAM:PF13415	PIRSF:PIRSF038118	PFscan:PS51752	PANTHER:PTHR23244
PANTHER:PTHR23244:SF208	SMART:SM00915	SUPFAM:SSF117281	SUPFAM:SSF51101	UniParc:UPI00000A0D32	:

Description

NSP3Nitrile-specifier protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O04318]

Coordinates

chr3:+:5562400..5564574

Molecular Weight (calculated)

51235.1 Da

IEP (calculated)

4.828

GRAVY (calculated)

-0.283

Length

467 amino acids

Sequence
(BLAST)

001: MAQKLVAQGG ETGDVWDDGV YDNVTKVYVG QGQYGIAFVK FEYANGSEVV VGDEHGEKTE LGVEEFEIDS DDYIVYVEGY REKVSDMTSE MITFLSFKTS
101: KGKTSQPIVK KPGVKFVLHG GKIVGFHGRS TDVLHSLGAY VSLPSTPKLL GNWIKVEQNG EGPGLRCSHG IAQVGNKIYS FGGELIPNQP IDKHLYVFDL
201: ETRTWSIAPA TGDVPHLSCL GVRMVSVGST LYTFGGRDFS RQYNGFYSFD TTTNEWKLLT PVEEGPTPRS FHSMAADEEN VYVFGGVGAM DRIKTLDSYN
301: IVDKTWFHCS NPGDSFSIRG GAGLEVVQGK VWIVYGFNGC EVDDVHFYDP AEDKWTQVET FGVKPNERSV FASAAIGKHI VIFGGEIAMD PRAHVGPGQL
401: IDGTFALDTE TLQWERLDKF EGTPSSRGWT ASTTGTIDGK KGLVMHGGKA PTNDRFDDLF FYGIDSV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.