Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029671.1-P | Field mustard | cytosol | 32.83 | 89.26 |
| CDY35957 | Canola | cytosol | 88.45 | 88.99 |
| CDY28023 | Canola | cytosol | 88.45 | 88.99 |
| PGSC0003DMT400046550 | Potato | cytosol | 24.01 | 69.91 |
| KRH43755 | Soybean | cytosol | 67.48 | 67.68 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 66.57 | 67.18 |
| VIT_12s0057g01080.t01 | Wine grape | cytosol | 66.26 | 66.67 |
| Os09t0249000-01 | Rice | cytosol, plasma membrane, plastid | 63.83 | 63.25 |
| KXG34722 | Sorghum | cytosol | 63.53 | 62.02 |
| TraesCS5B01G165000.1 | Wheat | mitochondrion | 59.88 | 60.24 |
| HORVU5Hr1G051310.1 | Barley | cytosol, mitochondrion, peroxisome | 59.88 | 60.24 |
| TraesCS5A01G168200.1 | Wheat | mitochondrion | 59.57 | 59.94 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 59.27 | 59.63 |
| AT5G48180.1 | Thale cress | cytosol | 54.1 | 54.6 |
| Zm00001d019221_P001 | Maize | cytosol | 61.09 | 52.62 |
| AT1G54040.2 | Thale cress | cytosol | 48.02 | 46.33 |
| AT2G33070.3 | Thale cress | cytosol | 52.28 | 36.36 |
| AT3G16400.1 | Thale cress | cytosol | 51.67 | 36.17 |
| AT3G16390.2 | Thale cress | cytosol | 49.54 | 34.9 |
| AT3G16410.1 | Thale cress | cytosol | 49.85 | 26.49 |
| AT1G18610.2 | Thale cress | cytosol | 26.75 | 15.83 |
| AT1G74150.1 | Thale cress | cytosol, mitochondrion | 27.05 | 15.64 |
| AT2G36360.4 | Thale cress | cytosol | 21.88 | 13.9 |
| AT5G04420.3 | Thale cress | cytosol | 21.28 | 13.62 |
| AT5G50310.1 | Thale cress | nucleus | 23.4 | 11.56 |
| AT5G27630.3 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 22.8 | 11.23 |
| AT3G05420.2 | Thale cress | cytosol | 22.8 | 11.21 |
| AT5G18590.1 | Thale cress | mitochondrion | 21.88 | 10.17 |
| AT4G04670.1 | Thale cress | cytosol | 17.93 | 5.93 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:819963 | UniProt:A0A178VBV3 | ProteinID:AAF13090.1 | ProteinID:AAF21182.1 |
| ProteinID:AEE74592.1 | EMBL:AF324668 | EMBL:AF329503 | ArrayExpress:AT3G07720 | EnsemblPlantsGene:AT3G07720 | RefSeq:AT3G07720 |
| TAIR:AT3G07720 | RefSeq:AT3G07720-TAIR-G | EnsemblPlants:AT3G07720.1 | TAIR:AT3G07720.1 | EMBL:AY039559 | EMBL:AY113872 |
| EMBL:BT000850 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0008150 | GO:GO:0010043 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | RefSeq:NP_566316.1 | ProteinID:OAP03178.1 | PFAM:PF01344 |
| PFAM:PF13415 | PFAM:PF13418 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF351 | UniProt:Q9S7W4 |
| SUPFAM:SSF117281 | UniParc:UPI00000AC091 | : | : | : | : |
Description
AT3g07720/F17A17_6 [Source:UniProtKB/TrEMBL;Acc:Q9S7W4]
Coordinates
chr3:+:2465235..2467270
Molecular Weight (calculated)
35687.8 Da
IEP (calculated)
4.846
GRAVY (calculated)
-0.352
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATPMEGKW VQLKQKGTGP GARSSHAIAL VGNKMYAFGG EFQPRVPVDN QLYVFDLETQ TWSIQEASGD APPPRVGVAM AAVGPIIYFF GGRDSTHQEL
101: NELYCFNTLT NQWKLLSSGE TGPQNRSYHS ITADSQNVYV FGGCGVDGRL NDLWAYNVVD QKWIKFPSPG EACRGRGGPG LEVVQGKIWV VYGFAGEEAD
201: DVHCFDIAKG EWKEVETKGE KPSARSVFST AVVGKQILIS GGEIDPSDLG HMGAGCFTGD AYGLDTETLE WRKWEDGVGS VEHPGPRGWC AFAAGSRDGK
301: QGLLVYGGNS PSNDRLDDIF FFTPNTLLK
101: NELYCFNTLT NQWKLLSSGE TGPQNRSYHS ITADSQNVYV FGGCGVDGRL NDLWAYNVVD QKWIKFPSPG EACRGRGGPG LEVVQGKIWV VYGFAGEEAD
201: DVHCFDIAKG EWKEVETKGE KPSARSVFST AVVGKQILIS GGEIDPSDLG HMGAGCFTGD AYGLDTETLE WRKWEDGVGS VEHPGPRGWC AFAAGSRDGK
301: QGLLVYGGNS PSNDRLDDIF FFTPNTLLK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.