Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34042 | Canola | nucleus | 92.94 | 93.36 |
| KRH63715 | Soybean | nucleus | 77.18 | 77.88 |
| KRH54239 | Soybean | nucleus | 75.98 | 76.67 |
| VIT_17s0000g10130.t01 | Wine grape | nucleus | 77.33 | 75.51 |
| PGSC0003DMT400039402 | Potato | nucleus | 76.43 | 75.3 |
| Solyc03g111390.2.1 | Tomato | nucleus | 76.28 | 75.15 |
| TraesCS2B01G361300.1 | Wheat | nucleus | 69.82 | 70.35 |
| TraesCS2A01G321200.1 | Wheat | nucleus | 69.82 | 70.35 |
| KXG26585 | Sorghum | nucleus | 69.07 | 69.91 |
| Os04t0483600-01 | Rice | nucleus | 69.37 | 69.79 |
| TraesCS2D01G342300.1 | Wheat | nucleus | 61.41 | 67.16 |
| HORVU2Hr1G083780.14 | Barley | nucleus, plastid | 65.92 | 65.82 |
| Bra000617.1-P | Field mustard | endoplasmic reticulum | 92.64 | 64.74 |
| CDX83165 | Canola | nucleus | 92.64 | 62.2 |
| Zm00001d003259_P006 | Maize | endoplasmic reticulum, mitochondrion, nucleus, plasma membrane | 65.17 | 61.13 |
| GSMUA_Achr10P... | Banana | nucleus | 44.44 | 59.8 |
| AT3G07720.1 | Thale cress | cytosol | 11.56 | 23.4 |
| AT1G54040.2 | Thale cress | cytosol | 11.26 | 21.99 |
| AT5G48180.1 | Thale cress | cytosol | 10.06 | 20.55 |
| AT2G36360.4 | Thale cress | cytosol | 13.66 | 17.57 |
| AT1G18610.2 | Thale cress | cytosol | 14.41 | 17.27 |
| AT2G33070.3 | Thale cress | cytosol | 11.41 | 16.07 |
| AT3G16400.1 | Thale cress | cytosol | 11.26 | 15.96 |
| AT1G74150.1 | Thale cress | cytosol, mitochondrion | 13.51 | 15.82 |
| AT3G16390.2 | Thale cress | cytosol | 10.96 | 15.63 |
| AT3G05420.2 | Thale cress | cytosol | 15.32 | 15.25 |
| AT5G04420.3 | Thale cress | cytosol | 11.56 | 14.98 |
| AT5G18590.1 | Thale cress | mitochondrion | 15.62 | 14.69 |
| AT5G27630.3 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 14.71 | 14.67 |
| AT3G16410.1 | Thale cress | cytosol | 11.71 | 12.6 |
| AT4G04670.1 | Thale cress | cytosol | 14.56 | 9.75 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.2 | EntrezGene:835096 | ProteinID:AED95924.1 | EMBL:AF412054 | ArrayExpress:AT5G50310 |
| EnsemblPlantsGene:AT5G50310 | RefSeq:AT5G50310 | TAIR:AT5G50310 | RefSeq:AT5G50310-TAIR-G | EnsemblPlants:AT5G50310.1 | TAIR:AT5G50310.1 |
| Unigene:At.26409 | InterPro:DUF4110 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | RefSeq:NP_568723.1 | PFAM:PF13415 | PFAM:PF13418 | PFAM:PF13422 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR23244 | PANTHER:PTHR23244:SF410 | UniProt:Q945N1 | SUPFAM:SSF117281 | UniParc:UPI00000AB40B | SEG:seg |
Description
AT5g50310/MXI22_1 [Source:UniProtKB/TrEMBL;Acc:Q945N1]
Coordinates
chr5:+:20474457..20479478
Molecular Weight (calculated)
76146.4 Da
IEP (calculated)
4.949
GRAVY (calculated)
-0.858
Length
666 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKTKKPGK GKEKTERKTA KADEKKARRE GKKLSPEDDI DAILLNIQKE EAKKKEVHVE ENVAAPSPRS NCSLTINPLK ETELILYGGE FYNGQKTYVY
101: GDLYRYDVEK QEWKLVSSPN SPPPRSSHQA VAWKNYLYIF GGEFTSPNQE RFHHYKDFWM LDVKTNQWEQ LNLKGCPSPR SGHRMVLYKH KIIIFGGFYD
201: TLREVRYYND LYVFDLDQYK WQEIKPKPGA MWPTARSGFQ FFVYQDEIFL YGGYSKEVSS EKSSEKGIVH ADLWSLDPRT WEWNKVKKIG MPPSSRAGFS
301: VCVHKKRALL FGGVVDMEME GDVMMSLFLN ELYGFQLDNR RWYPIELRKE KSSKDKAKKT LEAKPVASNN DDEMDSTEED ESLAMIEQTD GVGSSDGISE
401: RMATNLTVDG NRSDKSKALQ GAKTRLDPQV SVSEEVVKPC GRINSCMVVG KDTLYIYGGM MEIKDKEVTL DDLYSLNLSK LDEWKCIIPT TETEWVEVSD
501: DEEGDEDDDE DDSEDEGNSE ESDDEDDDEE VEAMDVDGSV KVGVVVAMIK GQGKSLRRKE KRARIEQIRA NLGLSDSQRT PVPGETLKDF YKRTNMYWQM
601: AAYEHTQHTG KELRKDGFDL AETRYLELKP ILDELAILEA EQKAEEAEGP EASSSSRKGG IAKKKR
101: GDLYRYDVEK QEWKLVSSPN SPPPRSSHQA VAWKNYLYIF GGEFTSPNQE RFHHYKDFWM LDVKTNQWEQ LNLKGCPSPR SGHRMVLYKH KIIIFGGFYD
201: TLREVRYYND LYVFDLDQYK WQEIKPKPGA MWPTARSGFQ FFVYQDEIFL YGGYSKEVSS EKSSEKGIVH ADLWSLDPRT WEWNKVKKIG MPPSSRAGFS
301: VCVHKKRALL FGGVVDMEME GDVMMSLFLN ELYGFQLDNR RWYPIELRKE KSSKDKAKKT LEAKPVASNN DDEMDSTEED ESLAMIEQTD GVGSSDGISE
401: RMATNLTVDG NRSDKSKALQ GAKTRLDPQV SVSEEVVKPC GRINSCMVVG KDTLYIYGGM MEIKDKEVTL DDLYSLNLSK LDEWKCIIPT TETEWVEVSD
501: DEEGDEDDDE DDSEDEGNSE ESDDEDDDEE VEAMDVDGSV KVGVVVAMIK GQGKSLRRKE KRARIEQIRA NLGLSDSQRT PVPGETLKDF YKRTNMYWQM
601: AAYEHTQHTG KELRKDGFDL AETRYLELKP ILDELAILEA EQKAEEAEGP EASSSSRKGG IAKKKR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.