Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G361300.1 | Wheat | nucleus | 95.89 | 88.35 |
| TraesCS2A01G321200.1 | Wheat | nucleus | 95.4 | 87.9 |
| GSMUA_Achr10P... | Banana | cytosol | 30.71 | 82.38 |
| HORVU2Hr1G083780.14 | Barley | nucleus, plastid | 88.34 | 80.66 |
| Os04t0483600-01 | Rice | nucleus | 83.91 | 77.19 |
| KXG26585 | Sorghum | nucleus | 82.1 | 75.99 |
| Zm00001d003259_P006 | Maize | endoplasmic reticulum, mitochondrion, nucleus, plasma membrane | 76.85 | 65.92 |
| KRH63715 | Soybean | nucleus | 67.82 | 62.58 |
| CDY34042 | Canola | nucleus | 67.32 | 61.84 |
| KRH54239 | Soybean | nucleus | 67.0 | 61.82 |
| AT5G50310.1 | Thale cress | nucleus | 67.16 | 61.41 |
| VIT_17s0000g10130.t01 | Wine grape | nucleus | 68.31 | 61.0 |
| Solyc03g111390.2.1 | Tomato | nucleus | 66.5 | 59.91 |
| PGSC0003DMT400039402 | Potato | nucleus | 66.34 | 59.76 |
| Bra000617.1-P | Field mustard | endoplasmic reticulum | 67.32 | 43.02 |
| CDX83165 | Canola | nucleus | 67.16 | 41.23 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 12.48 | 23.24 |
| TraesCS5D01G516000.1 | Wheat | mitochondrion | 13.79 | 16.41 |
| TraesCS5D01G106400.1 | Wheat | cytosol | 14.12 | 16.35 |
| TraesCS3D01G195400.1 | Wheat | cytosol, mitochondrion, nucleus, vacuole | 16.09 | 16.33 |
| TraesCS5D01G515900.2 | Wheat | plastid | 16.26 | 14.8 |
| TraesCS6D01G389800.2 | Wheat | cytosol | 12.97 | 14.77 |
| TraesCS5D01G106700.1 | Wheat | mitochondrion | 16.58 | 14.72 |
| TraesCS4D01G147200.1 | Wheat | mitochondrion | 16.26 | 14.47 |
| TraesCS2D01G229200.1 | Wheat | cytosol | 14.78 | 8.28 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G342300.1 | EnsemblPlantsGene:TraesCS2D01G342300 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | ncoils:Coil | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF410 | PFAM:PF13415 |
| PFAM:PF13418 | PFAM:PF13964 | SEG:seg | SUPFAM:SSF117281 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr2D:-:437902626..437910513
Molecular Weight (calculated)
69579.3 Da
IEP (calculated)
5.016
GRAVY (calculated)
-0.917
Length
609 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKQKKPGK GKEKTERKTA KGEEKRARRE AGKVGEEDDI DAILKNIQKE EAKKKEVHVE ENVPAPSPRS NGSLTINPSK DTELILYGGE FYNGSKTFVY
101: GDLYRYDVEK NEWKLVSSPN SPPPRSAHQT VAWKNNVYMF GGEFTSPNQE RFHHYKDFWT LDLKTNQWEQ ILAKGCPSAR SGHRMVLYKH KIVLFGGFYD
201: TLREVRYYND LHVFDLDNFK WEEIKPRPGC LWPSPRSGFQ LVVYQDQIYM YGGYFKEVSS DKNASEKGTV HADMWSLDPR TWEWNKVKKT GMPPGPRAGF
301: SMCVHKKRAV LFGGVVDMEV EADVLMSMFM NELYGFQLDN HRWYPLELRK DKPAKNKTKD IKRKETANDS ESNIGNEDDD TMDCSEEATD VQSEVGGVSN
401: HLTKSLTLNK VGSSQNSDVM SDSTEQEATP EAIKPIGRIN ASMAVGKDTL YLYGGMMEVK DREITLDDLY SLNLSKLDEW KCIIPASESE WLEMSDDDDE
501: EDEDEDDEDD SADDAMETDE DEEESDEEAE KNVAVSGAVA LLKGERKKLR RKEKRARIEQ IRVILGLSDS QRTPTELTER FLQENKYVLA NGSLRAHSTH
601: RKGAPQGWL
101: GDLYRYDVEK NEWKLVSSPN SPPPRSAHQT VAWKNNVYMF GGEFTSPNQE RFHHYKDFWT LDLKTNQWEQ ILAKGCPSAR SGHRMVLYKH KIVLFGGFYD
201: TLREVRYYND LHVFDLDNFK WEEIKPRPGC LWPSPRSGFQ LVVYQDQIYM YGGYFKEVSS DKNASEKGTV HADMWSLDPR TWEWNKVKKT GMPPGPRAGF
301: SMCVHKKRAV LFGGVVDMEV EADVLMSMFM NELYGFQLDN HRWYPLELRK DKPAKNKTKD IKRKETANDS ESNIGNEDDD TMDCSEEATD VQSEVGGVSN
401: HLTKSLTLNK VGSSQNSDVM SDSTEQEATP EAIKPIGRIN ASMAVGKDTL YLYGGMMEVK DREITLDDLY SLNLSKLDEW KCIIPASESE WLEMSDDDDE
501: EDEDEDDEDD SADDAMETDE DEEESDEEAE KNVAVSGAVA LLKGERKKLR RKEKRARIEQ IRVILGLSDS QRTPTELTER FLQENKYVLA NGSLRAHSTH
601: RKGAPQGWL
001: MGKKTKKPGK GKEKTERKTA KADEKKARRE GKKLSPEDDI DAILLNIQKE EAKKKEVHVE ENVAAPSPRS NCSLTINPLK ETELILYGGE FYNGQKTYVY
101: GDLYRYDVEK QEWKLVSSPN SPPPRSSHQA VAWKNYLYIF GGEFTSPNQE RFHHYKDFWM LDVKTNQWEQ LNLKGCPSPR SGHRMVLYKH KIIIFGGFYD
201: TLREVRYYND LYVFDLDQYK WQEIKPKPGA MWPTARSGFQ FFVYQDEIFL YGGYSKEVSS EKSSEKGIVH ADLWSLDPRT WEWNKVKKIG MPPSSRAGFS
301: VCVHKKRALL FGGVVDMEME GDVMMSLFLN ELYGFQLDNR RWYPIELRKE KSSKDKAKKT LEAKPVASNN DDEMDSTEED ESLAMIEQTD GVGSSDGISE
401: RMATNLTVDG NRSDKSKALQ GAKTRLDPQV SVSEEVVKPC GRINSCMVVG KDTLYIYGGM MEIKDKEVTL DDLYSLNLSK LDEWKCIIPT TETEWVEVSD
501: DEEGDEDDDE DDSEDEGNSE ESDDEDDDEE VEAMDVDGSV KVGVVVAMIK GQGKSLRRKE KRARIEQIRA NLGLSDSQRT PVPGETLKDF YKRTNMYWQM
601: AAYEHTQHTG KELRKDGFDL AETRYLELKP ILDELAILEA EQKAEEAEGP EASSSSRKGG IAKKKR
101: GDLYRYDVEK QEWKLVSSPN SPPPRSSHQA VAWKNYLYIF GGEFTSPNQE RFHHYKDFWM LDVKTNQWEQ LNLKGCPSPR SGHRMVLYKH KIIIFGGFYD
201: TLREVRYYND LYVFDLDQYK WQEIKPKPGA MWPTARSGFQ FFVYQDEIFL YGGYSKEVSS EKSSEKGIVH ADLWSLDPRT WEWNKVKKIG MPPSSRAGFS
301: VCVHKKRALL FGGVVDMEME GDVMMSLFLN ELYGFQLDNR RWYPIELRKE KSSKDKAKKT LEAKPVASNN DDEMDSTEED ESLAMIEQTD GVGSSDGISE
401: RMATNLTVDG NRSDKSKALQ GAKTRLDPQV SVSEEVVKPC GRINSCMVVG KDTLYIYGGM MEIKDKEVTL DDLYSLNLSK LDEWKCIIPT TETEWVEVSD
501: DEEGDEDDDE DDSEDEGNSE ESDDEDDDEE VEAMDVDGSV KVGVVVAMIK GQGKSLRRKE KRARIEQIRA NLGLSDSQRT PVPGETLKDF YKRTNMYWQM
601: AAYEHTQHTG KELRKDGFDL AETRYLELKP ILDELAILEA EQKAEEAEGP EASSSSRKGG IAKKKR
Arabidopsis Description
AT5g50310/MXI22_1 [Source:UniProtKB/TrEMBL;Acc:Q945N1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.