Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, vacuole, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- nucleus 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G192200.1 | Wheat | cytosol, mitochondrion, nucleus, vacuole | 98.33 | 97.36 |
| TraesCS3B01G221000.2 | Wheat | cytosol, mitochondrion, nucleus, vacuole | 97.67 | 96.86 |
| HORVU3Hr1G040720.1 | Barley | mitochondrion, nucleus, peroxisome, vacuole | 91.83 | 89.01 |
| Os01t0300900-01 | Rice | cytosol | 82.83 | 79.65 |
| EES00630 | Sorghum | cytosol | 80.83 | 79.12 |
| Zm00001d040606_P001 | Maize | cytosol | 78.67 | 76.13 |
| Zm00001d009123_P001 | Maize | cytosol | 77.0 | 73.92 |
| GSMUA_Achr8P29940_001 | Banana | cytosol | 65.67 | 62.54 |
| VIT_14s0060g01090.t01 | Wine grape | nucleus | 57.0 | 53.44 |
| KRH33805 | Soybean | nucleus | 54.33 | 51.66 |
| KRG90521 | Soybean | peroxisome | 54.0 | 51.35 |
| KRH68432 | Soybean | cytosol, nucleus, plastid | 50.83 | 48.11 |
| PGSC0003DMT400007146 | Potato | cytosol | 50.5 | 46.33 |
| KRG96716 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 51.33 | 42.96 |
| Solyc01g100600.2.1 | Tomato | cytosol | 32.17 | 38.68 |
| TraesCS5D01G172400.1 | Wheat | mitochondrion | 13.0 | 23.85 |
| TraesCS5D01G106400.1 | Wheat | cytosol | 17.83 | 20.34 |
| TraesCS5D01G516000.1 | Wheat | mitochondrion | 17.0 | 19.92 |
| TraesCS6D01G389800.2 | Wheat | cytosol | 15.33 | 17.2 |
| TraesCS5D01G515900.2 | Wheat | plastid | 18.5 | 16.59 |
| TraesCS2D01G342300.1 | Wheat | nucleus | 16.33 | 16.09 |
| TraesCS5D01G106700.1 | Wheat | mitochondrion | 17.33 | 15.16 |
| TraesCS4D01G147200.1 | Wheat | mitochondrion | 17.17 | 15.06 |
| TraesCS2D01G229200.1 | Wheat | cytosol | 16.17 | 8.92 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G195400.1 | EnsemblPlantsGene:TraesCS3D01G195400 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF417 | PFAM:PF13415 |
| PFAM:PF13418 | SEG:seg | SMART:SM00612 | SUPFAM:SSF117281 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr3D:-:189037542..189040648
Molecular Weight (calculated)
65109.0 Da
IEP (calculated)
8.105
GRAVY (calculated)
-0.498
Length
600 amino acids
Sequence
(BLAST)
(BLAST)
001: MERRRKAMWL YPKVVGFNPP ERWGHSACFF EGVIYVFGGC CGGLHFSDVL TLNLDTMAWS SLATKGQRPG TRDSHGAALI GHRMLVFGGT NGNKKVNDLH
101: VLDLRTKEWS RPPCKGTPPS PRESHTVTTA AGGDKLVVFG GSGEGEGNYL NDVHVLDLPT MTWTSPQVAG EVVPAPRDSH GAVTVGNRLF VYGGDCGDRY
201: HGEVDVLDMD TMAWSRFSVK GASPGVRAGH AALGIGSKIY VIGGVGDKQY YSDAWILDVV DRSWTQLETC GQQPQGRFSH SAVIMNTDIA IYGGCGEDER
301: PLNELLVLQL GSGHPNGRYN ISMCKILSNH WSEEKRKLLR AQHHKDASAS NGELGHKPRE AEIEQRNPFL RGLENGHVKR RKTGDAGPNE MELEQEEHSL
401: SLSQHSSPSQ SEKDQEQNGA QMISGGLISS AMQPLVRLNA NGSRRTSGGI KTDQFLRGIA PQQRHEMQFL TAEPKQQHRP SGPPLIGAEV HGTVDGAFDS
501: GYLVTAVVSG QLFRGVLFAP GPGVTAPRPV MQHQILNSSA IPPQHQHARP LPQATGFVRP DYSHHARRGF PARVVKSEPE RSGSDLHHVV LTLGGPGGGN
101: VLDLRTKEWS RPPCKGTPPS PRESHTVTTA AGGDKLVVFG GSGEGEGNYL NDVHVLDLPT MTWTSPQVAG EVVPAPRDSH GAVTVGNRLF VYGGDCGDRY
201: HGEVDVLDMD TMAWSRFSVK GASPGVRAGH AALGIGSKIY VIGGVGDKQY YSDAWILDVV DRSWTQLETC GQQPQGRFSH SAVIMNTDIA IYGGCGEDER
301: PLNELLVLQL GSGHPNGRYN ISMCKILSNH WSEEKRKLLR AQHHKDASAS NGELGHKPRE AEIEQRNPFL RGLENGHVKR RKTGDAGPNE MELEQEEHSL
401: SLSQHSSPSQ SEKDQEQNGA QMISGGLISS AMQPLVRLNA NGSRRTSGGI KTDQFLRGIA PQQRHEMQFL TAEPKQQHRP SGPPLIGAEV HGTVDGAFDS
501: GYLVTAVVSG QLFRGVLFAP GPGVTAPRPV MQHQILNSSA IPPQHQHARP LPQATGFVRP DYSHHARRGF PARVVKSEPE RSGSDLHHVV LTLGGPGGGN
001: MRWERVRQLQ QQVGLGESSS GPGKRWGHTC NAIKGGSFLY VFGGYGRDNC QTNQVHVFDA AKQIWTQPMI NGTPPPPRDS HSCTTVGDNL FVFGGTDGVN
101: PLKDLYILDT SSHTWKCPSV RGEGPEAREG HSATLVGKRL FVFGGCGKSS GINEEIYYND VYIFNTETFV WKRAVTIGNP PSARDSHSCS SWKNKLVVIG
201: GEDGHDYYLS DVHILDTDTL IWKELNTSGQ LLTPRAGHVT VSLGRNFFVF GGFTDAQNLY DDLYVLDVDT CIWSKVLTMG EGPSARFSSA GACLDPHKAG
301: FLVIVGGCNK NLEALDDMFY LQTGLGYDAR FDQNVGMLSL KKQLKIKCQE QSHASSLYDK SLVRINMDHQ GRGNFGLNTC QFNEGKMMFQ ARITESYPVG
401: YTMETMIDGK VLRGVLFSNK RSSILPADQS FSRKRPAMSN GDQDNRSKIS RTLIKDQANA VESKDSQLNG MEAGIDTISN PLGVNITTVA VAPHETETSV
501: VTSDAKNQDA SQLDMGTVNT VNTAPSSVPQ VDEASLESRN AITIDDRANK TGLGES
101: PLKDLYILDT SSHTWKCPSV RGEGPEAREG HSATLVGKRL FVFGGCGKSS GINEEIYYND VYIFNTETFV WKRAVTIGNP PSARDSHSCS SWKNKLVVIG
201: GEDGHDYYLS DVHILDTDTL IWKELNTSGQ LLTPRAGHVT VSLGRNFFVF GGFTDAQNLY DDLYVLDVDT CIWSKVLTMG EGPSARFSSA GACLDPHKAG
301: FLVIVGGCNK NLEALDDMFY LQTGLGYDAR FDQNVGMLSL KKQLKIKCQE QSHASSLYDK SLVRINMDHQ GRGNFGLNTC QFNEGKMMFQ ARITESYPVG
401: YTMETMIDGK VLRGVLFSNK RSSILPADQS FSRKRPAMSN GDQDNRSKIS RTLIKDQANA VESKDSQLNG MEAGIDTISN PLGVNITTVA VAPHETETSV
501: VTSDAKNQDA SQLDMGTVNT VNTAPSSVPQ VDEASLESRN AITIDDRANK TGLGES
Arabidopsis Description
F25I16.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9FZ82]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.