Factsheet for VIT_14s0060g01090.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90521	Soybean	peroxisome	60.94	61.81
KRH33805	Soybean	nucleus	60.94	61.81
GSMUA_Achr8P29940_001	Banana	cytosol	58.91	59.84
EES00630	Sorghum	cytosol	54.84	57.26
KRH68432	Soybean	cytosol, nucleus, plastid	56.72	57.26
PGSC0003DMT400007146	Potato	cytosol	58.44	57.19
TraesCS3D01G195400.1	Wheat	cytosol, mitochondrion, nucleus, vacuole	53.44	57.0
TraesCS3B01G221000.2	Wheat	cytosol, mitochondrion, nucleus, vacuole	53.28	56.36
TraesCS3A01G192200.1	Wheat	cytosol, mitochondrion, nucleus, vacuole	53.28	56.27
Os01t0300900-01	Rice	cytosol	54.53	55.93
Zm00001d040606_P001	Maize	cytosol	54.06	55.81
Zm00001d009123_P001	Maize	cytosol	52.81	54.08
HORVU3Hr1G040720.1	Barley	mitochondrion, nucleus, peroxisome, vacuole	52.19	53.96
KRG96716	Soybean	endoplasmic reticulum, nucleus, plasma membrane	57.66	51.46
Solyc01g100600.2.1	Tomato	cytosol	38.44	49.3
VIT_12s0057g01080.t01	Wine grape	cytosol	11.88	23.24
VIT_17s0000g05150.t01	Wine grape	cytosol	21.41	22.64
VIT_13s0019g05290.t01	Wine grape	cytosol	16.25	20.47
VIT_13s0074g00620.t01	Wine grape	cytosol	16.72	19.24
VIT_14s0060g02410.t01	Wine grape	plastid	17.5	16.62
VIT_05s0020g01740.t01	Wine grape	mitochondrion	17.81	15.9
VIT_17s0000g10130.t01	Wine grape	nucleus	16.41	15.4
VIT_10s0116g01770.t01	Wine grape	cytosol	17.19	10.56

Protein Annotations

EntrezGene:100254622	Gene3D:2.120.10.80	MapMan:35.1	EMBL:AM440167	ProteinID:CAN71813	ProteinID:CAN71813.1
ProteinID:CBI39602	ProteinID:CBI39602.3	UniProt:D7UA38	EMBL:FN596746	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PFAM:PF13415	PFAM:PF13854
PANTHER:PTHR23244	PANTHER:PTHR23244:SF336	SMART:SM00612	SUPFAM:SSF117281	UniParc:UPI00019848E8	ArrayExpress:VIT_14s0060g01090
EnsemblPlantsGene:VIT_14s0060g01090	EnsemblPlants:VIT_14s0060g01090.t01	unigene:Vvi.15578	RefSeq:XP_010659707.2	SEG:seg	:

Description

No Description!

Coordinates

chr14:+:836089..839967

Molecular Weight (calculated)

69741.4 Da

IEP (calculated)

7.365

GRAVY (calculated)

-0.438

Length

640 amino acids

Sequence
(BLAST)

001: MGSLGGETAK KKAMWLYPKV LGFNPSERWG HSACYSHGLV YVFGGCCGGL HFCDVLVLNL DTMAWDTLVT TGQGPGPRDS HSAVILGQRM IVFGGTNGSK
101: KVNDLHILDL GSKEWTRPEC RGAPPSPRES HTATLVGDEK LVIFGGSGEG EANYLNDFHV LDLKTMRWTS PEVKGDTPAP RDSHSAVAIG NKLIVYGGDC
201: GDRYHGDIDI LDMDTLTWSR LSVQGSSPGV RAGHAAVSIG TKVYIIGGVG DKHYYNDVWV LDVITCLWNQ LEIRGQQPQG RFSHTAIVTD SDIAIYGGCG
301: EDERPLNELL VLQLGSEHPN GRYNISLCKI FGNHWSHGKR RFHREAESNS KTMLFGNDVE VVRKDACEPE LESNRSVRFS SDTLHPKRRR TGNLKGWEFE
401: SEQEEHSLSL SQSSSPSQSD QEQTPIGKAT DSSIAASLGV PLFRQPSNSQ ANNVSSKQKE PRSVDQSSRH DICFLGERQN QQKPENFQRQ QLQYHQPPEQ
501: KPLDLIGAEI RGKVDGAFDS GYLMTATVNG QIFRGVLFSP GPAMVSRGIV LGQSASSPMA HVAVTRPCPK LIHAEPSLFK PSQQAIAFPV PESGQAYRQA
601: VIARPSPVVR SITPAHPKLR TDLQGVVLTL GGPGSSHGGL

Best Arabidopsis Sequence Match ( AT1G18610.2 )
(BLAST)

001: MRWERVRQLQ QQVGLGESSS GPGKRWGHTC NAIKGGSFLY VFGGYGRDNC QTNQVHVFDA AKQIWTQPMI NGTPPPPRDS HSCTTVGDNL FVFGGTDGVN
101: PLKDLYILDT SSHTWKCPSV RGEGPEAREG HSATLVGKRL FVFGGCGKSS GINEEIYYND VYIFNTETFV WKRAVTIGNP PSARDSHSCS SWKNKLVVIG
201: GEDGHDYYLS DVHILDTDTL IWKELNTSGQ LLTPRAGHVT VSLGRNFFVF GGFTDAQNLY DDLYVLDVDT CIWSKVLTMG EGPSARFSSA GACLDPHKAG
301: FLVIVGGCNK NLEALDDMFY LQTGLGYDAR FDQNVGMLSL KKQLKIKCQE QSHASSLYDK SLVRINMDHQ GRGNFGLNTC QFNEGKMMFQ ARITESYPVG
401: YTMETMIDGK VLRGVLFSNK RSSILPADQS FSRKRPAMSN GDQDNRSKIS RTLIKDQANA VESKDSQLNG MEAGIDTISN PLGVNITTVA VAPHETETSV
501: VTSDAKNQDA SQLDMGTVNT VNTAPSSVPQ VDEASLESRN AITIDDRANK TGLGES

Arabidopsis Description

F25I16.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9FZ82]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.