Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d040606_P001 | Maize | cytosol | 92.01 | 90.97 |
Zm00001d009123_P001 | Maize | cytosol | 90.21 | 88.48 |
Os01t0300900-01 | Rice | cytosol | 85.48 | 83.97 |
TraesCS3D01G195400.1 | Wheat | cytosol, mitochondrion, nucleus, vacuole | 79.12 | 80.83 |
TraesCS3B01G221000.2 | Wheat | cytosol, mitochondrion, nucleus, vacuole | 79.28 | 80.33 |
TraesCS3A01G192200.1 | Wheat | cytosol, mitochondrion, nucleus, vacuole | 79.28 | 80.2 |
HORVU3Hr1G040720.1 | Barley | mitochondrion, nucleus, peroxisome, vacuole | 78.47 | 77.71 |
GSMUA_Achr8P29940_001 | Banana | cytosol | 66.72 | 64.92 |
VIT_14s0060g01090.t01 | Wine grape | nucleus | 57.26 | 54.84 |
KRG90521 | Soybean | peroxisome | 53.67 | 52.14 |
KRH33805 | Soybean | nucleus | 53.34 | 51.82 |
PGSC0003DMT400007146 | Potato | cytosol | 51.22 | 48.01 |
KRH68432 | Soybean | cytosol, nucleus, plastid | 49.59 | 47.95 |
KRG96716 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 50.41 | 43.1 |
Solyc01g100600.2.1 | Tomato | cytosol | 32.95 | 40.48 |
KXG34722 | Sorghum | cytosol | 12.72 | 23.15 |
KXG37190 | Sorghum | cytosol | 17.62 | 21.51 |
EES16101 | Sorghum | cytosol, nucleus, plastid | 17.62 | 20.04 |
EER90565 | Sorghum | plastid | 18.92 | 17.6 |
OQU85983 | Sorghum | cytosol | 14.52 | 17.02 |
KXG26585 | Sorghum | nucleus | 16.15 | 15.05 |
OQU83951 | Sorghum | mitochondrion | 16.64 | 14.85 |
KXG23613 | Sorghum | mitochondrion | 16.64 | 14.74 |
KXG36320 | Sorghum | cytosol, nucleus, peroxisome | 16.15 | 9.16 |
Protein Annotations
EnsemblPlants:EES00630 | EnsemblPlantsGene:SORBI_3003G143900 | EntrezGene:8060319 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005515 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF417 |
PFAM:PF13415 | PFAM:PF13418 | ProteinID:EES00630 | ProteinID:EES00630.1 | RefSeq:XP_002455510.1 | SEG:seg |
SMART:SM00612 | SUPFAM:SSF117281 | UniParc:UPI0001A84441 | UniProt:C5XI56 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr3:+:14442569..14447347
Molecular Weight (calculated)
66428.7 Da
IEP (calculated)
8.772
GRAVY (calculated)
-0.464
Length
613 amino acids
Sequence
(BLAST)
(BLAST)
001: MERRRKAMWL YPKVVGFNPP ERWGHSACFF EGVVYVFGGC CGGLHFSDVL TLNVETMAWS SLATTGQRPG TRDSHGAALV GHRMLVFGGT NGGKKVNDLH
101: VLDLRTREWT RPQCKGAPPS PRESHTVTVV GGDRLVVFGG SGEGEGNYLS DVHVLDVPTM TWSTPEVKAP PAPRDSHSAV AVGSRLFVFG GDCGDRYHGE
201: VDVLDVDTMT WSRFPVKGAS PGVRAGHAAM SVGSKVYIIG GVGDKQYYSD VWVLDVTNRS WSQLEVCGQQ PQGRFSHTAV VMNTDIAVYG GCGEDERPLN
301: ELLILQLGSE HPNGRYNISM CKVLSNHWSQ EKRKFLRSET KDASVSNGKM VQKPREAEIE QRNPFLRGLE NGRAKRRKTG EVRPNEPESE QEEHSLSLSQ
401: HSSPSQSDQE QNGAHKLSAS PNTSISALQP FVRLKANGTL RAPGPGGISS RPLKTDQFLR TIAPQHRQEV QFLSSDHKPQ PRPPGPPLIG AEVHGTVDGA
501: FDSGYLMTAV VNGQLFRGVL FAPGPGVTAP RPTVHHQILT SSAVPPQQQR PLLAHAIPVH TRPVPQATGF VLPDCAHHAR QGFPAKAVKS EPERGSSDLH
601: DVVLTLGGPG GGK
101: VLDLRTREWT RPQCKGAPPS PRESHTVTVV GGDRLVVFGG SGEGEGNYLS DVHVLDVPTM TWSTPEVKAP PAPRDSHSAV AVGSRLFVFG GDCGDRYHGE
201: VDVLDVDTMT WSRFPVKGAS PGVRAGHAAM SVGSKVYIIG GVGDKQYYSD VWVLDVTNRS WSQLEVCGQQ PQGRFSHTAV VMNTDIAVYG GCGEDERPLN
301: ELLILQLGSE HPNGRYNISM CKVLSNHWSQ EKRKFLRSET KDASVSNGKM VQKPREAEIE QRNPFLRGLE NGRAKRRKTG EVRPNEPESE QEEHSLSLSQ
401: HSSPSQSDQE QNGAHKLSAS PNTSISALQP FVRLKANGTL RAPGPGGISS RPLKTDQFLR TIAPQHRQEV QFLSSDHKPQ PRPPGPPLIG AEVHGTVDGA
501: FDSGYLMTAV VNGQLFRGVL FAPGPGVTAP RPTVHHQILT SSAVPPQQQR PLLAHAIPVH TRPVPQATGF VLPDCAHHAR QGFPAKAVKS EPERGSSDLH
601: DVVLTLGGPG GGK
001: MRWERVRQLQ QQVGLGESSS GPGKRWGHTC NAIKGGSFLY VFGGYGRDNC QTNQVHVFDA AKQIWTQPMI NGTPPPPRDS HSCTTVGDNL FVFGGTDGVN
101: PLKDLYILDT SSHTWKCPSV RGEGPEAREG HSATLVGKRL FVFGGCGKSS GINEEIYYND VYIFNTETFV WKRAVTIGNP PSARDSHSCS SWKNKLVVIG
201: GEDGHDYYLS DVHILDTDTL IWKELNTSGQ LLTPRAGHVT VSLGRNFFVF GGFTDAQNLY DDLYVLDVDT CIWSKVLTMG EGPSARFSSA GACLDPHKAG
301: FLVIVGGCNK NLEALDDMFY LQTGLGYDAR FDQNVGMLSL KKQLKIKCQE QSHASSLYDK SLVRINMDHQ GRGNFGLNTC QFNEGKMMFQ ARITESYPVG
401: YTMETMIDGK VLRGVLFSNK RSSILPADQS FSRKRPAMSN GDQDNRSKIS RTLIKDQANA VESKDSQLNG MEAGIDTISN PLGVNITTVA VAPHETETSV
501: VTSDAKNQDA SQLDMGTVNT VNTAPSSVPQ VDEASLESRN AITIDDRANK TGLGES
101: PLKDLYILDT SSHTWKCPSV RGEGPEAREG HSATLVGKRL FVFGGCGKSS GINEEIYYND VYIFNTETFV WKRAVTIGNP PSARDSHSCS SWKNKLVVIG
201: GEDGHDYYLS DVHILDTDTL IWKELNTSGQ LLTPRAGHVT VSLGRNFFVF GGFTDAQNLY DDLYVLDVDT CIWSKVLTMG EGPSARFSSA GACLDPHKAG
301: FLVIVGGCNK NLEALDDMFY LQTGLGYDAR FDQNVGMLSL KKQLKIKCQE QSHASSLYDK SLVRINMDHQ GRGNFGLNTC QFNEGKMMFQ ARITESYPVG
401: YTMETMIDGK VLRGVLFSNK RSSILPADQS FSRKRPAMSN GDQDNRSKIS RTLIKDQANA VESKDSQLNG MEAGIDTISN PLGVNITTVA VAPHETETSV
501: VTSDAKNQDA SQLDMGTVNT VNTAPSSVPQ VDEASLESRN AITIDDRANK TGLGES
Arabidopsis Description
F25I16.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9FZ82]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.