CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	88.73	80.26
Os12t0538800-01	Rice	mitochondrion, nucleus	79.05	78.37
TraesCS5B01G100500.1	Wheat	mitochondrion	76.16	76.82
TraesCS5A01G094400.1	Wheat	mitochondrion	75.72	76.27
TraesCS5D01G106700.1	Wheat	mitochondrion	75.43	76.09
HORVU5Hr1G025430.25	Barley	mitochondrion	72.4	71.67
OQU83951	Sorghum	mitochondrion	70.52	71.03
PGSC0003DMT400058372	Potato	mitochondrion	27.02	58.44
GSMUA_Achr3P23920_001	Banana	mitochondrion	55.35	53.87
VIT_05s0020g01740.t01	Wine grape	mitochondrion	54.91	53.0
Solyc01g067480.2.1	Tomato	mitochondrion	50.29	52.97
KRH02216	Soybean	mitochondrion	52.89	51.69
PGSC0003DMT400050298	Potato	cytosol, plastid	27.89	51.33
KRH21038	Soybean	mitochondrion	52.02	50.7
KRH11220	Soybean	mitochondrion	52.46	50.56
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	51.73	50.28
CDY13903	Canola	mitochondrion	48.27	49.55
KRH50909	Soybean	nucleus	51.88	49.38
AT5G18590.1	Thale cress	mitochondrion	48.84	47.74
Bra002170.1-P	Field mustard	mitochondrion	48.27	47.71
CDX92598	Canola	mitochondrion	48.12	47.57
PGSC0003DMT400058369	Potato	mitochondrion	17.77	39.05
EES16101	Sorghum	cytosol, nucleus, plastid	21.53	27.64
OQU85983	Sorghum	cytosol	19.65	26.0
EER90565	Sorghum	plastid	24.13	25.34
KXG34722	Sorghum	cytosol	9.68	19.88
KXG37190	Sorghum	cytosol	14.16	19.52
EES00630	Sorghum	cytosol	14.74	16.64
KXG26585	Sorghum	nucleus	15.17	15.96
KXG36320	Sorghum	cytosol, nucleus, peroxisome	14.74	9.44

Protein Annotations

EnsemblPlants:KXG23613	EnsemblPlantsGene:SORBI_3008G118100	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	ncoils:Coil	PANTHER:PTHR23244	PANTHER:PTHR23244:SF414
PFAM:PF01344	PFAM:PF13418	ProteinID:KXG23613	ProteinID:KXG23613.1	SEG:seg	SUPFAM:SSF117281
UniParc:UPI0003C6F627	UniProt:A0A1B6PD69	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:53044929..53050870

Molecular Weight (calculated)

76444.4 Da

IEP (calculated)

8.952

GRAVY (calculated)

-0.559

Length

692 amino acids

Sequence
(BLAST)

001: MFGFSRRRGK LGRSKGDPSD SLNSSRSPVG PSKHLSLPNV YDAVMTSVSG GADDLSNRCS SDTFDPDGRT FNISENWTVL STEGNKPTPR FYHAAAIVSS
101: KMVVFGGDSG QRLLDDTKIL NLEKLTWDSA PPKVCPSPSG RSMKLPACKG HCLVPWGNSV ILVGGKTEPA SDRLSVWTFN TETELWSLIE AKGDIPAARS
201: GHTVIRAGAT LILFGGEDTK GKKRHDLHMF DLKSSTWLPL NYKGTGPSPR SNHVATLYDD KILLIFGGHS KSKTLNDLYS LDFDTMVWSR VKTHGPHPSP
301: RAGCSGTLCG TKWYIAGGAS KKKRHAETWA FDVLQSKWSV CVVPPSSSIT TKKGFSMVPF YHRDKIALIA FGGNKKEPSN KVEVLVVLQN EHSFSWRSAP
401: PEVDRVLYEY SPSNKELADH LNKCAPLYSN SSIARHSLTS VIEHPPRREP LSESLLKQSS LGTSLHGQLD QVEECSLGQK LQKPMDDDRY DDVDDSSSCQ
501: DRTPKGHRSK RTGPGIQNDI AENIVTGGSN VRRIARCSSD VSQSHLYNTK IADLIRRNTT LEDQLSTALA SKDQLEKSLS SVIHSREQLE KMLANKDKEA
601: EMLKEKIACL ELAQEESNSL SNTVHADNVR LEREVAFLKA VTDETQKELH STRRVLAGEQ SRAFQLQVEV FHLKQRLQIL EGRSGTPTKQ PL

Best Arabidopsis Sequence Match ( AT5G18590.1 )
(BLAST)

001: MFSFSKRRMR LGRVKKVQLS DSVQGYKSPL RVTKRADSSS NEAAVAATSY SDELDFQPSS GNSENWMVLS VNGEKPAPRF NHAAATIGNK MIVVGGESGS
101: GLLDDVQVLN FDSCTWSTAS SKVYLSPSSL PLMIPAWKGH CLVSWGKKVL LVGGKTDPSS DRVSVWAFDT DSECWSLMDA KGDLPVSRSG HTVVRASSVL
201: ILFGGEDSKK RKLNDLHMFD LKSSTWLPLN CTGTRPCARS HHVATLFDDK ILFVFGGSGK NKTLNDLYSL DFETMVWSRI KIRGFHPSPR AGSCGVLCGT
301: KWYITGGGSR KKRHAETLVF DILKVEWSVA SISSQSSVTS NKGFSLVLLQ HKDKDFLVAF GGTKKDPSNQ VDAFTIDKNK SESPTHPQTT SKKNPGRLLF
401: GKRSSSSAVL TSDESVKASS QRLIDSVARQ KLASAIEEHG GSGRRSLSEI AFGDHRNPPS GNVSLRKQFS TEEEYRAVIE PAKCSEEDIS VPPPTTDDNT
501: GGAKITAEKT LSMVSDREIL SLQKQCSETY PLENVDGALI FQEMDNINFA GSASSSSVYQ FHEAKMTALI RRNGILEGQL EAALAGREAA ERNVSVALRS
601: KQETDKKLSD AMRDVELLKE KLTGLELAQE EANSLSNMVH SDNVRLEHDV AFLKAVLDDT QKELHSTRGV LAGERARAFQ LQVEVFHLKQ RLQSLENRAA
701: TPRKPFHV

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WWX4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.