CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002170.1-P	Field mustard	mitochondrion	96.74	93.14
CDX92598	Canola	mitochondrion	96.59	93.0
AT5G18590.1	Thale cress	mitochondrion	91.39	87.01
PGSC0003DMT400058372	Potato	mitochondrion	33.53	70.62
Solyc01g067480.2.1	Tomato	mitochondrion	63.95	65.6
VIT_05s0020g01740.t01	Wine grape	mitochondrion	67.36	63.32
KRH02216	Soybean	mitochondrion	65.43	62.29
KRH50909	Soybean	nucleus	65.28	60.52
KRH11220	Soybean	mitochondrion	63.2	59.33
KRH21038	Soybean	mitochondrion	62.31	59.15
PGSC0003DMT400050298	Potato	cytosol, plastid	32.64	58.51
GSMUA_Achr3P23920_001	Banana	mitochondrion	54.75	51.9
OQU83951	Sorghum	mitochondrion	51.93	50.95
TraesCS4A01G167800.1	Wheat	mitochondrion	51.19	50.44
TraesCS4D01G147200.1	Wheat	mitochondrion	51.04	50.29
TraesCSU01G068300.1	Wheat	mitochondrion	50.74	50.22
Zm00001d048718_P010	Maize	mitochondrion	51.78	50.22
PGSC0003DMT400058369	Potato	mitochondrion	23.44	50.16
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	52.37	49.58
HORVU4Hr1G032550.32	Barley	mitochondrion	50.3	49.49
KXG23613	Sorghum	mitochondrion	49.55	48.27
TraesCS5A01G094400.1	Wheat	mitochondrion	49.11	48.18
TraesCS5D01G106700.1	Wheat	mitochondrion	48.66	47.81
TraesCS5B01G100500.1	Wheat	mitochondrion	48.52	47.67
Os12t0538800-01	Rice	mitochondrion, nucleus	47.92	46.28
HORVU5Hr1G025430.25	Barley	mitochondrion	45.55	43.92
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	46.59	41.05
Os11t0657000-01	Rice	mitochondrion	9.79	40.74
CDY11290	Canola	cytosol	20.47	27.44
CDY58438	Canola	cytosol	20.33	27.24
CDY05568	Canola	plastid	24.33	24.59
CDY25029	Canola	cytosol, nucleus, plastid	23.44	23.58
CDX74147	Canola	cytosol, nucleus, plastid	23.15	23.42
CDY40708	Canola	cytosol	22.7	22.97
CDY18777	Canola	cytosol	22.55	22.86
CDY05166	Canola	cytosol, nucleus, plastid	22.55	22.82
CDY27769	Canola	cytosol	22.4	22.67
CDY18797	Canola	cytosol	22.26	22.52
CDY28023	Canola	cytosol	10.83	22.32
CDY52048	Canola	plastid	11.57	22.22
CDY19142	Canola	cytosol, peroxisome, plastid	11.57	22.22
CDY35957	Canola	cytosol	10.53	21.71
CDY30169	Canola	cytosol	10.24	21.36
CDX85317	Canola	cytosol	9.79	20.5
CDY36630	Canola	cytosol	10.39	20.41
CDY51408	Canola	cytosol	10.24	20.12
CDY08215	Canola	cytosol	10.39	20.11
CDY48738	Canola	cytosol	9.5	19.88
CDX86322	Canola	cytosol	10.09	19.77
CDY05697	Canola	cytosol	9.35	19.57
CDY30681	Canola	cytosol	9.94	19.25
CDY67946	Canola	cytosol	9.94	19.09
CDX94790	Canola	cytosol	9.64	18.95
CDX96969	Canola	peroxisome	9.5	18.66
CDY49014	Canola	cytosol	9.5	18.66
CDX75043	Canola	cytosol	12.46	18.42
CDY49133	Canola	mitochondrion, nucleus	13.35	18.37
CDY64894	Canola	cytosol, mitochondrion	6.97	18.22
CDY42440	Canola	mitochondrion	13.06	18.18
CDY65743	Canola	cytosol, peroxisome, plastid	11.28	17.97
CDX84132	Canola	cytosol	12.76	17.37
CDY28366	Canola	cytosol	12.02	17.34
CDY20194	Canola	cytosol	12.02	17.34
CDY56199	Canola	cytosol	10.53	17.19
CDX75048	Canola	cytosol, plastid	12.61	17.07
CDY26745	Canola	nucleus	13.06	17.02
CDX96712	Canola	mitochondrion	13.06	16.79
CDX83831	Canola	nucleus	13.2	16.67
CDY19228	Canola	nucleus	12.76	16.63
CDY03958	Canola	cytosol	11.28	16.31
CDY56200	Canola	endoplasmic reticulum, extracellular, plasma membrane	11.13	16.2
CDY03963	Canola	cytosol	10.98	15.85
CDY24063	Canola	cytosol, mitochondrion	6.68	15.85
CDX92073	Canola	cytosol	10.98	15.68
CDY34042	Canola	nucleus	14.84	15.08
CDX73059	Canola	cytosol, mitochondrion	12.46	14.43
CDY43093	Canola	cytosol	1.63	13.58
CDX96521	Canola	mitochondrion	12.02	13.15
CDY60589	Canola	cytosol	12.02	10.23
CDX75045	Canola	cytosol	12.61	10.13
CDX83165	Canola	nucleus	14.54	9.88
CDY21313	Canola	cytosol	13.8	9.38
CDX90875	Canola	cytosol	13.95	9.32
CDY43091	Canola	cytosol	1.04	6.19
CDY72137	Canola	cytosol	1.04	4.55
CDY65828	Canola	cytosol	1.78	3.69

Protein Annotations

EnsemblPlants:CDY13903	EnsemblPlantsGene:GSBRNA2T00078365001	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	ncoils:Coil	PANTHER:PTHR23244	PANTHER:PTHR23244:SF308
PFAM:PF01344	PFAM:PF13418	ProteinID:CDY13903	ProteinID:CDY13903.1	SEG:seg	SUPFAM:SSF117281
UniParc:UPI0004EF0442	UniProt:A0A078FNH6	MapMan:35.1	:	:	:

Description

BnaC09g39230DBnaC09g39230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNH6]

Coordinates

chrLK032039:-:67100..71031

Molecular Weight (calculated)

74015.6 Da

IEP (calculated)

9.706

GRAVY (calculated)

-0.388

Length

674 amino acids

Sequence
(BLAST)

001: MFSFSKRRMK LGRVKVQLSD SAQGTKSPLR VTKRVDNSTN EAAALAATSH SDELDFQPSS GNSENWMGLS VGGDKPAPRF NHAAAAIGNK MIVVGGESGN
101: GLLDDVQVLN FDSFTWSTVS SKVYLSPSSL PLMIPSWKGH CLVSWGKKVL LVGGKTDPSS DRVSVWSFDT ESECWSLMDA KGDIPVSRSG HTVVRASSVL
201: ILFGGEDSKK RKLNDLHMFD LKSSTWLPLN CTGTRPCARS NHVATLFDDK ILFVFGGSGK NKTLSDLYSL DFETMVWSRI KIRGFHPSPR AGSCGVLCGN
301: KWYITGGGSR KKRHAETLVF DILKVEWSVA SISSQSSITA NKGFSLVLLQ HKDKDFLVAF GGTKKDPSNQ VEVFTIDKNK SESPTTHHQT TSKKNTGRLL
401: FGKRSSSSAV LTVDESVKAS SQRLIDSVAR QKLASAIEDH GGSGRRSLSE ITFADYHAPS SGNVSLRKQF STEEEYRAVK TLSTVSDREL HKQTSESFPF
501: AHIDDALIFP EMDNAATLAS SSSVYQFHEA KMTALIRRNG ILEGQLEAAL AGREAAERNV SVALRSKQES DKKLSDALRD VELLKEKLTG LELAQDEANS
601: LSNMVHSDNV RLEHDVAFLR AVLDDTQKEL QSTRGVLAGE RARAFQLQVE VFHLKQRLQS LENRAATPRK PFHV

Best Arabidopsis Sequence Match ( AT5G18590.1 )
(BLAST)

001: MFSFSKRRMR LGRVKKVQLS DSVQGYKSPL RVTKRADSSS NEAAVAATSY SDELDFQPSS GNSENWMVLS VNGEKPAPRF NHAAATIGNK MIVVGGESGS
101: GLLDDVQVLN FDSCTWSTAS SKVYLSPSSL PLMIPAWKGH CLVSWGKKVL LVGGKTDPSS DRVSVWAFDT DSECWSLMDA KGDLPVSRSG HTVVRASSVL
201: ILFGGEDSKK RKLNDLHMFD LKSSTWLPLN CTGTRPCARS HHVATLFDDK ILFVFGGSGK NKTLNDLYSL DFETMVWSRI KIRGFHPSPR AGSCGVLCGT
301: KWYITGGGSR KKRHAETLVF DILKVEWSVA SISSQSSVTS NKGFSLVLLQ HKDKDFLVAF GGTKKDPSNQ VDAFTIDKNK SESPTHPQTT SKKNPGRLLF
401: GKRSSSSAVL TSDESVKASS QRLIDSVARQ KLASAIEEHG GSGRRSLSEI AFGDHRNPPS GNVSLRKQFS TEEEYRAVIE PAKCSEEDIS VPPPTTDDNT
501: GGAKITAEKT LSMVSDREIL SLQKQCSETY PLENVDGALI FQEMDNINFA GSASSSSVYQ FHEAKMTALI RRNGILEGQL EAALAGREAA ERNVSVALRS
601: KQETDKKLSD AMRDVELLKE KLTGLELAQE EANSLSNMVH SDNVRLEHDV AFLKAVLDDT QKELHSTRGV LAGERARAFQ LQVEVFHLKQ RLQSLENRAA
701: TPRKPFHV

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WWX4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.