Factsheet for HORVU4Hr1G032550.32

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G147200.1	Wheat	mitochondrion	93.72	93.86
TraesCS4A01G167800.1	Wheat	mitochondrion	93.28	93.42
TraesCSU01G068300.1	Wheat	mitochondrion	92.12	92.66
OQU83951	Sorghum	mitochondrion	82.48	82.24
Zm00001d048718_P010	Maize	mitochondrion	79.85	78.7
Os11t0657000-01	Rice	mitochondrion	18.54	78.4
HORVU5Hr1G025430.25	Barley	mitochondrion	63.5	62.23
PGSC0003DMT400058372	Potato	mitochondrion	28.18	60.31
GSMUA_Achr3P23920_001	Banana	mitochondrion	55.77	53.73
Solyc01g067480.2.1	Tomato	mitochondrion	50.8	52.97
PGSC0003DMT400050298	Potato	cytosol, plastid	29.05	52.93
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	54.31	52.25
VIT_05s0020g01740.t01	Wine grape	mitochondrion	54.16	51.74
CDY13903	Canola	mitochondrion	49.49	50.3
KRH02216	Soybean	mitochondrion	51.82	50.14
KRH21038	Soybean	mitochondrion	51.82	50.0
KRH11220	Soybean	mitochondrion	52.26	49.86
CDX92598	Canola	mitochondrion	49.63	48.57
Bra002170.1-P	Field mustard	mitochondrion	49.63	48.57
AT5G18590.1	Thale cress	mitochondrion	49.78	48.16
KRH50909	Soybean	nucleus	51.09	48.14
PGSC0003DMT400058369	Potato	mitochondrion	16.79	36.51
HORVU5Hr1G025310.1	Barley	cytosol	21.02	29.94
HORVU6Hr1G093000.5	Barley	cytosol	19.56	25.09
HORVU5Hr1G117970.2	Barley	plastid	24.38	23.99
HORVU5Hr1G051310.1	Barley	cytosol, mitochondrion, peroxisome	9.93	20.8
HORVU5Hr1G117920.1	Barley	cytosol	14.6	19.12
HORVU3Hr1G040720.1	Barley	mitochondrion, nucleus, peroxisome, vacuole	14.6	16.16
HORVU2Hr1G083780.14	Barley	nucleus, plastid	15.33	15.74
HORVU2Hr1G046680.19	Barley	cytosol	14.45	9.06

Protein Annotations

EnsemblPlants:HORVU4Hr1G032550.32	EnsemblPlantsGene:HORVU4Hr1G032550	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	ncoils:Coil	PANTHER:PTHR23244	PANTHER:PTHR23244:SF414	PFAM:PF13418
SUPFAM:SSF117281	UniParc:UPI000B482583	UniProt:A0A287NR45	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr4H:-:223609232..223620976

Molecular Weight (calculated)

76013.9 Da

IEP (calculated)

8.597

GRAVY (calculated)

-0.579

Length

685 amino acids

Sequence
(BLAST)

001: MPKMFGFSRG RMKLGRLRGH LHDPFHGPRS PAHPTKRSSH LTREEPVATS VSGLPDVLAW RCSSDTFDLN GRAFENSENW AVLSTDGEKP SPRFDHAAAI
101: VGSKMIVFGG DSGNHLLDDT KILSLDKLTW DSVASKVCAS PGGRPAQFRP CKGHCLVPWG KNVILVGGKS EPSSDRISAV WTFNSETEIW SHMEAKGDIP
201: VARSGHTVTR AGPVLILFGG EDTKGKKLHD LHMFDLKSLT WLPLNYKGAG PSPRSNHVAA LYDDKILLIF GGQSKSKTLN DVHALDFETM VWSRMKTHGH
301: HPSPRAGCCG ALCGTKWYIA GGGSKKRRHP ETWVFDVVES KWSVCVVPPS SSITTRKGFS MVPLYHRDKT VLVSFGGNKK EPSDKVEVLV VLQNEHCFSW
401: RSVPDAEPIM YEDSSPASKE LADHLNNCDP LYYSSVARHS LATTVESSSG RKSLPDSLLH NSKVGGSSLR RQFRQEEECS LAQKLQKPID NGKYKDVDDY
501: SELPSFTNQK QQSDTYHSPD ADAKANRVGR NSSDINHQHD TRIANLVRRN MALEEKLSAA MVSKDEAEKN LSLVIDTKEE LEKKLAERDR EVVALKEKVG
601: GLEQAHEDSN NASNTVHADN VRLEREVAFL KAVMDETQKE LHLTRGVLAG ERARAFQLQV EVFHLKQRLQ SMDGLSSAQR KPQNL

Best Arabidopsis Sequence Match ( AT5G18590.1 )
(BLAST)

001: MFSFSKRRMR LGRVKKVQLS DSVQGYKSPL RVTKRADSSS NEAAVAATSY SDELDFQPSS GNSENWMVLS VNGEKPAPRF NHAAATIGNK MIVVGGESGS
101: GLLDDVQVLN FDSCTWSTAS SKVYLSPSSL PLMIPAWKGH CLVSWGKKVL LVGGKTDPSS DRVSVWAFDT DSECWSLMDA KGDLPVSRSG HTVVRASSVL
201: ILFGGEDSKK RKLNDLHMFD LKSSTWLPLN CTGTRPCARS HHVATLFDDK ILFVFGGSGK NKTLNDLYSL DFETMVWSRI KIRGFHPSPR AGSCGVLCGT
301: KWYITGGGSR KKRHAETLVF DILKVEWSVA SISSQSSVTS NKGFSLVLLQ HKDKDFLVAF GGTKKDPSNQ VDAFTIDKNK SESPTHPQTT SKKNPGRLLF
401: GKRSSSSAVL TSDESVKASS QRLIDSVARQ KLASAIEEHG GSGRRSLSEI AFGDHRNPPS GNVSLRKQFS TEEEYRAVIE PAKCSEEDIS VPPPTTDDNT
501: GGAKITAEKT LSMVSDREIL SLQKQCSETY PLENVDGALI FQEMDNINFA GSASSSSVYQ FHEAKMTALI RRNGILEGQL EAALAGREAA ERNVSVALRS
601: KQETDKKLSD AMRDVELLKE KLTGLELAQE EANSLSNMVH SDNVRLEHDV AFLKAVLDDT QKELHSTRGV LAGERARAFQ LQVEVFHLKQ RLQSLENRAA
701: TPRKPFHV

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WWX4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.