Factsheet for PGSC0003DMT400058372

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g067480.2.1	Tomato	mitochondrion	99.38	48.4
PGSC0003DMT400050298	Potato	cytosol, plastid	54.06	46.01
Os11t0657000-01	Rice	mitochondrion	20.94	41.36
VIT_05s0020g01740.t01	Wine grape	mitochondrion	79.06	35.29
KRH02216	Soybean	mitochondrion	76.56	34.6
KRH11220	Soybean	mitochondrion	76.88	34.26
KRH50909	Soybean	nucleus	76.56	33.7
CDY13903	Canola	mitochondrion	70.62	33.53
KRH21038	Soybean	mitochondrion	74.38	33.52
CDX92598	Canola	mitochondrion	70.31	32.14
Bra002170.1-P	Field mustard	mitochondrion	70.31	32.14
AT5G18590.1	Thale cress	mitochondrion	70.62	31.92
GSMUA_Achr3P23920_001	Banana	mitochondrion	64.69	29.11
TraesCSU01G068300.1	Wheat	mitochondrion	60.31	28.34
HORVU4Hr1G032550.32	Barley	mitochondrion	60.31	28.18
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	62.19	27.95
OQU83951	Sorghum	mitochondrion	60.0	27.95
TraesCS4D01G147200.1	Wheat	mitochondrion	59.69	27.92
TraesCS4A01G167800.1	Wheat	mitochondrion	59.69	27.92
PGSC0003DMT400070308	Potato	cytosol	30.94	27.12
Zm00001d048718_P010	Maize	mitochondrion	58.75	27.05
KXG23613	Sorghum	mitochondrion	58.44	27.02
TraesCS5A01G094400.1	Wheat	mitochondrion	56.25	26.2
TraesCS5B01G100500.1	Wheat	mitochondrion	55.62	25.95
Os12t0538800-01	Rice	mitochondrion, nucleus	56.56	25.93
HORVU5Hr1G025430.25	Barley	mitochondrion	56.56	25.89
TraesCS5D01G106700.1	Wheat	mitochondrion	55.31	25.8
Zm00001d023868_P004	Maize	plasma membrane, plastid, vacuole	53.44	22.35
PGSC0003DMT400063503	Potato	extracellular	21.25	20.3
PGSC0003DMT400050172	Potato	cytosol, mitochondrion, plastid	19.06	13.71
PGSC0003DMT400039402	Potato	nucleus	23.44	11.09
PGSC0003DMT400007146	Potato	cytosol	22.5	11.01
PGSC0003DMT400060067	Potato	cytosol	17.5	7.5
PGSC0003DMT400046550	Potato	cytosol	2.5	7.08
PGSC0003DMT400058369	Potato	mitochondrion	0.94	0.95

Protein Annotations

EnsemblPlants:PGSC0003DMT400058372	EnsemblPlantsGene:PGSC0003DMG402022673	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PANTHER:PTHR23244	PANTHER:PTHR23244:SF308	PFAM:PF01344
PFAM:PF13418	PGSC:PGSC0003DMG402022673	SUPFAM:SSF117281	UniParc:UPI000294FD2D	UniProt:M1C2K4	MapMan:35.1

Description

Acyl-CoA binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG402022673]

Coordinates

chr1:+:58834549..58840917

Molecular Weight (calculated)

34837.8 Da

IEP (calculated)

9.927

GRAVY (calculated)

-0.339

Length

320 amino acids

Sequence
(BLAST)

001: MFGFSKRRMK LGRLNSAQGT RSPMRHPKRS SNSSGEAVPP SNNDSEEKSC QCSSGAPEFN DCASGGSENW MLLSIAGEKP TPRFNHAAAV VGNKMVVVGG
101: ETGSRMLEDV QVLNFDSFSW TTASSKLYLS PTSLPLKIPA CKGHALVQWG KKILMVGGKT DPSSEKVSVW AFDTETECWS LLEAKGDVPV ARSGHTVLRA
201: SSVLILFGGE DVKRRKLNDL HMFDLKSLTW LPLHCTGTGP SPRSNHVSAL YDDKLLLIFG GSSKSRTLND LYTLDFETMA WSRIKIRGFH PSPRAGCCGV
301: LCGTKWYIAG GGSRKRSMSK

Best Arabidopsis Sequence Match ( AT5G18590.1 )
(BLAST)

001: MFSFSKRRMR LGRVKKVQLS DSVQGYKSPL RVTKRADSSS NEAAVAATSY SDELDFQPSS GNSENWMVLS VNGEKPAPRF NHAAATIGNK MIVVGGESGS
101: GLLDDVQVLN FDSCTWSTAS SKVYLSPSSL PLMIPAWKGH CLVSWGKKVL LVGGKTDPSS DRVSVWAFDT DSECWSLMDA KGDLPVSRSG HTVVRASSVL
201: ILFGGEDSKK RKLNDLHMFD LKSSTWLPLN CTGTRPCARS HHVATLFDDK ILFVFGGSGK NKTLNDLYSL DFETMVWSRI KIRGFHPSPR AGSCGVLCGT
301: KWYITGGGSR KKRHAETLVF DILKVEWSVA SISSQSSVTS NKGFSLVLLQ HKDKDFLVAF GGTKKDPSNQ VDAFTIDKNK SESPTHPQTT SKKNPGRLLF
401: GKRSSSSAVL TSDESVKASS QRLIDSVARQ KLASAIEEHG GSGRRSLSEI AFGDHRNPPS GNVSLRKQFS TEEEYRAVIE PAKCSEEDIS VPPPTTDDNT
501: GGAKITAEKT LSMVSDREIL SLQKQCSETY PLENVDGALI FQEMDNINFA GSASSSSVYQ FHEAKMTALI RRNGILEGQL EAALAGREAA ERNVSVALRS
601: KQETDKKLSD AMRDVELLKE KLTGLELAQE EANSLSNMVH SDNVRLEHDV AFLKAVLDDT QKELHSTRGV LAGERARAFQ LQVEVFHLKQ RLQSLENRAA
701: TPRKPFHV

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WWX4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.