CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048718_P010	Maize	mitochondrion	91.41	90.36
TraesCS4D01G147200.1	Wheat	mitochondrion	86.03	86.4
TraesCS4A01G167800.1	Wheat	mitochondrion	85.3	85.67
TraesCSU01G068300.1	Wheat	mitochondrion	84.28	85.02
HORVU4Hr1G032550.32	Barley	mitochondrion	82.24	82.48
Os11t0657000-01	Rice	mitochondrion	19.36	82.1
KXG23613	Sorghum	mitochondrion	71.03	70.52
PGSC0003DMT400058372	Potato	mitochondrion	27.95	60.0
GSMUA_Achr3P23920_001	Banana	mitochondrion	58.08	56.12
Solyc01g067480.2.1	Tomato	mitochondrion	52.11	54.49
GSMUA_Achr5P26950_001	Banana	mitochondrion, nucleus	55.46	53.51
VIT_05s0020g01740.t01	Wine grape	mitochondrion	55.46	53.14
KRH21038	Soybean	mitochondrion	54.0	52.25
KRH02216	Soybean	mitochondrion	53.71	52.12
CDY13903	Canola	mitochondrion	50.95	51.93
PGSC0003DMT400050298	Potato	cytosol, plastid	28.38	51.86
KRH11220	Soybean	mitochondrion	53.57	51.25
Bra002170.1-P	Field mustard	mitochondrion	51.09	50.14
CDX92598	Canola	mitochondrion	50.95	50.0
KRH50909	Soybean	nucleus	52.84	49.93
AT5G18590.1	Thale cress	mitochondrion	51.38	49.86
PGSC0003DMT400058369	Potato	mitochondrion	18.34	40.0
EES16101	Sorghum	cytosol, nucleus, plastid	21.4	27.27
EER90565	Sorghum	plastid	25.47	26.56
OQU85983	Sorghum	cytosol	19.94	26.2
KXG37190	Sorghum	cytosol	14.56	19.92
KXG34722	Sorghum	cytosol	9.46	19.29
EES00630	Sorghum	cytosol	14.85	16.64
KXG26585	Sorghum	nucleus	15.57	16.26
KXG36320	Sorghum	cytosol, nucleus, peroxisome	14.12	8.97

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	UniProt:C5Y7E0	ncoils:Coil	ProteinID:EES10204.2	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006950
GO:GO:0006952	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	EnsemblPlants:OQU83951	ProteinID:OQU83951	ProteinID:OQU83951.1	ProteinID:OQU83952.1
PFAM:PF13418	PANTHER:PTHR23244	PANTHER:PTHR23244:SF414	EnsemblPlantsGene:SORBI_3005G204100	SUPFAM:SSF117281	UniParc:UPI00081AE8E6
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:68963779..68969844

Molecular Weight (calculated)

76471.4 Da

IEP (calculated)

8.868

GRAVY (calculated)

-0.646

Length

687 amino acids

Sequence
(BLAST)

001: MPKMFGFSRR RMKLGRLKGH LHDHFHASRS PSRTTKRFSH PNGEDPLTTS VSGRPDDHSW RCSSDTFDIN GRAFESSENW AVLSTEGDKP VPRFDHAAAM
101: VGSKMVVFGG DSGQCLLDDT KILSLDKLTW DSVAPKVRPS SNGRSLKLRP CKGHCLVPWG KNVILVGGKS DQPSDKISVW TFNTESELWS HMEAKGDIPV
201: SRSGHTVIRA GPVLILFGGE DAKGKKLHDL HMFDLKSLTW LPLNYKGAGP SPRSNHVAAL YDDRILLIFG GQSKSKTLND IHALDFETMV WSRVKTHGHH
301: PSPRAGCCGA LCGTKWYIAG GGSKKKRHPE TWVFDVLESK WSVCVVPPSS SITTKKGFSM VPLYYRDKIV LVAFGGNKKE PSDKVEVLVV LQNEHCFSWR
401: SAPEVEPLLY DDSPPSSREL ADHLNNCAPL YSTSSAARSS LATTAENSSG RKSLPDSLLQ NSNLGSSSLR RQFRQEEDCS LAQKLQKPID DDKYKDADDC
501: SELPTIANQK PRNDTRQSPD AVDAKARRLG RSSSDINNNH QDTRITTLIR RNMALEEQLS AALASKDEAE KNLSLVIDSK DELEKRLAEK DREVEALKEK
601: ATGLELAQEE SNNLSNTVHA DNVRLEREVA FLKAVMDETQ KELHSTRGVL AGERARAFQL QVEVFHLKQR LQTMEGRSPT PRKPQNQ

Best Arabidopsis Sequence Match ( AT5G18590.1 )
(BLAST)

001: MFSFSKRRMR LGRVKKVQLS DSVQGYKSPL RVTKRADSSS NEAAVAATSY SDELDFQPSS GNSENWMVLS VNGEKPAPRF NHAAATIGNK MIVVGGESGS
101: GLLDDVQVLN FDSCTWSTAS SKVYLSPSSL PLMIPAWKGH CLVSWGKKVL LVGGKTDPSS DRVSVWAFDT DSECWSLMDA KGDLPVSRSG HTVVRASSVL
201: ILFGGEDSKK RKLNDLHMFD LKSSTWLPLN CTGTRPCARS HHVATLFDDK ILFVFGGSGK NKTLNDLYSL DFETMVWSRI KIRGFHPSPR AGSCGVLCGT
301: KWYITGGGSR KKRHAETLVF DILKVEWSVA SISSQSSVTS NKGFSLVLLQ HKDKDFLVAF GGTKKDPSNQ VDAFTIDKNK SESPTHPQTT SKKNPGRLLF
401: GKRSSSSAVL TSDESVKASS QRLIDSVARQ KLASAIEEHG GSGRRSLSEI AFGDHRNPPS GNVSLRKQFS TEEEYRAVIE PAKCSEEDIS VPPPTTDDNT
501: GGAKITAEKT LSMVSDREIL SLQKQCSETY PLENVDGALI FQEMDNINFA GSASSSSVYQ FHEAKMTALI RRNGILEGQL EAALAGREAA ERNVSVALRS
601: KQETDKKLSD AMRDVELLKE KLTGLELAQE EANSLSNMVH SDNVRLEHDV AFLKAVLDDT QKELHSTRGV LAGERARAFQ LQVEVFHLKQ RLQSLENRAA
701: TPRKPFHV

Arabidopsis Description

Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q0WWX4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.