CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034758_P003	Maize	plastid	94.84	91.78
Os03t0835600-01	Rice	plastid	87.56	88.09
TraesCS4A01G356400.2	Wheat	plastid	86.34	85.05
TraesCS5D01G515900.2	Wheat	plastid	86.19	84.9
TraesCS5B01G515800.1	Wheat	cytosol, peroxisome, plastid	86.19	84.9
HORVU5Hr1G117970.2	Barley	plastid	84.98	80.46
Zm00001d012892_P002	Maize	plastid	92.87	78.16
GSMUA_Achr2P02340_001	Banana	cytosol, mitochondrion, nucleus, plastid	76.02	74.33
VIT_14s0060g02410.t01	Wine grape	plastid	70.11	68.55
GSMUA_Achr6P20340_001	Banana	plastid	70.86	68.48
Solyc01g099350.2.1	Tomato	extracellular	66.16	65.17
Bra039439.1-P	Field mustard	cytosol	64.95	64.17
CDY27769	Canola	cytosol	64.8	64.11
CDY05166	Canola	cytosol, nucleus, plastid	64.8	64.11
AT3G05420.2	Thale cress	cytosol	64.95	63.98
KRH68531	Soybean	nucleus	63.73	63.83
KRG96823	Soybean	cytosol, plastid	62.67	63.64
CDY40708	Canola	cytosol	64.19	63.51
CDY18777	Canola	cytosol	63.73	63.16
CDY18797	Canola	cytosol	63.73	63.06
Bra040219.1-P	Field mustard	cytosol	63.58	63.01
KRG92884	Soybean	nucleus	62.82	62.82
PGSC0003DMT400063503	Potato	extracellular	31.87	62.69
CDX74147	Canola	cytosol, nucleus, plastid	62.82	62.16
AT5G27630.3	Thale cress	cytosol, mitochondrion, nucleus, plastid	62.22	61.38
CDY05568	Canola	plastid	61.91	61.17
Bra001147.1-P	Field mustard	cytosol	63.13	60.91
Bra020582.1-P	Field mustard	cytosol, nucleus, plastid	61.61	60.87
CDY25029	Canola	cytosol, nucleus, plastid	61.3	60.3
EES16101	Sorghum	cytosol, nucleus, plastid	43.1	52.69
OQU85983	Sorghum	cytosol	32.63	41.11
OQU83951	Sorghum	mitochondrion	26.56	25.47
KXG23613	Sorghum	mitochondrion	25.34	24.13
KXG34722	Sorghum	cytosol	10.32	20.18
KXG37190	Sorghum	cytosol	14.42	18.92
EES00630	Sorghum	cytosol	17.6	18.92
KXG26585	Sorghum	nucleus	15.33	15.35
KXG36320	Sorghum	cytosol, nucleus, peroxisome	18.21	11.1

Protein Annotations

Gene3D:1.20.80.10	Gene3D:2.120.10.80	MapMan:35.1	EntrezGene:8080195	InterPro:Acyl-CoA-binding_protein	InterPro:Acyl-CoA-binding_sf
UniProt:C5WTY5	ncoils:Coil	EnsemblPlants:EER90565	ProteinID:EER90565	ProteinID:EER90565.1	InterPro:FERM/acyl-CoA-bd_prot_sf
GO:GO:0000062	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000582	InterPro:IPR014352
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PFAM:PF00887	PFAM:PF01344	PFAM:PF13415
PFAM:PF13418	PFscan:PS51228	PANTHER:PTHR23244	PANTHER:PTHR23244:SF336	EnsemblPlantsGene:SORBI_3001G023100	SUPFAM:SSF117281
SUPFAM:SSF47027	unigene:Sbi.14225	UniParc:UPI0001A825C1	RefSeq:XP_002463567.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:1850735..1856772

Molecular Weight (calculated)

71813.1 Da

IEP (calculated)

4.928

GRAVY (calculated)

-0.432

Length

659 amino acids

Sequence
(BLAST)

001: MASSGLAYPD RFYAAAAYAG FGAGGATSSA AISRFQNDVA LLLYGLHQQA TVGPCNVPKP RAWNPVEQSK WTSWHGLGSM PSAEAMRLFV KILEEEDPGW
101: YSRVPEFNPE PVVDIQMHKP KDEPQSVPAS TNGTSIPEPK IISENGSSVE IQDKDVILEG LSTVSSHDEW TPLSVSGLRP KPRYEHGATV LQNKMYIFGG
201: NHNGRYLSDL QALDLKSLTW SKVDAKLQAE SADSTKTTQI APCAGHSLIS WGNKFLSIAG HTKDPSEGIT VKEFDPHTCT WSIVKTYGKP PVSRGGQTVT
301: LVGTTLVLFG GEDAKRCLLN DLHILDLETM TWDDVDAIGT PPSPRSDHAA ACHADRYLLI FGGGSHATCF NDLHVLDLQT MEWSRPKQQG LTPSPRAGHA
401: GATVGENWYI VGGGNNKSGV SETLVLNMST LTWSVVSTVE GRVPLASEGM TLVHSNYSGY DYLISFGGYN GRYSNEVYTL KLSLKSDSQS TVNEETVSDT
501: TSRVIEPEAE ISQDGKIREI AMDSADSDLN NRNDEASEQL IADLKAQKEE LEATLSREQL QTVQLKEDIA QAETRNAELT KELQAVRGQL ASEQSRCFKL
601: EVDVAELRQK LQSMDALEKE VELLRRQKAA SEQAALDAKQ RQSSGGMWGW LAGSPPPTV

Best Arabidopsis Sequence Match ( AT3G05420.1 )
(BLAST)

001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INRAKDEPVV ENGSTFSETK TISTENGRLA ETQDKDVVSE DSNTVSVYNQ WTAPQTSGQR PKARYEHGAA VIQDKMYIYG
201: GNHNGRYLGD LHVLDLKSWT WSRVETKVAT ESQETSTPTL LAPCAGHSLI AWDNKLLSIG GHTKDPSESM QVKVFDPHTI TWSMLKTYGK PPVSRGGQSV
301: TMVGKTLVIF GGQDAKRSLL NDLHILDLDT MTWDEIDAVG VSPSPRSDHA AAVHAERFLL IFGGGSHATC FDDLHVLDLQ TMEWSRPAQQ GDAPTPRAGH
401: AGVTIGENWF IVGGGDNKSG ASESVVLNMS TLAWSVVASV QGRVPLASEG LSLVVSSYNG EDVLVAFGGY NGRYNNEINL LKPSHKSTLQ TKTLEAPLPG
501: SLSAVNNATT RDIESEVEVS QEGRVREIVM DNVNPGSKVE GNSERIIATI KSEKEELEAS LNKERMQTLQ LRQELGEAEL RNTDLYKELQ SVRGQLAAEQ
601: SRCFKLEVDV AELRQKLQTL ETLQKELELL QRQKAASEQA AMNAKRQGSG GVWGWLAGSP QEKDDDSP

Arabidopsis Description

ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.