Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400063503 | Potato | extracellular | 48.28 | 96.42 |
| VIT_14s0060g02410.t01 | Wine grape | plastid | 79.82 | 79.23 |
| CDY05166 | Canola | cytosol, nucleus, plastid | 73.39 | 73.72 |
| CDY27769 | Canola | cytosol | 73.24 | 73.57 |
| Bra039439.1-P | Field mustard | cytosol | 73.09 | 73.31 |
| KRG92884 | Soybean | nucleus | 71.9 | 72.99 |
| KRH68531 | Soybean | nucleus | 71.6 | 72.8 |
| KRG96823 | Soybean | cytosol, plastid | 70.55 | 72.73 |
| AT3G05420.2 | Thale cress | cytosol | 72.5 | 72.5 |
| CDY18777 | Canola | cytosol | 71.6 | 72.03 |
| Bra040219.1-P | Field mustard | cytosol | 71.3 | 71.73 |
| CDY40708 | Canola | cytosol | 71.3 | 71.62 |
| CDY18797 | Canola | cytosol | 71.15 | 71.47 |
| AT5G27630.3 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 70.1 | 70.21 |
| CDX74147 | Canola | cytosol, nucleus, plastid | 69.81 | 70.12 |
| GSMUA_Achr2P02340_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 69.36 | 68.84 |
| Bra001147.1-P | Field mustard | cytosol | 70.1 | 68.67 |
| CDY05568 | Canola | plastid | 67.86 | 68.07 |
| CDY25029 | Canola | cytosol, nucleus, plastid | 68.16 | 68.06 |
| Bra020582.1-P | Field mustard | cytosol, nucleus, plastid | 67.71 | 67.92 |
| GSMUA_Achr6P20340_001 | Banana | plastid | 68.61 | 67.3 |
| EER90565 | Sorghum | plastid | 65.17 | 66.16 |
| Os03t0835600-01 | Rice | plastid | 63.83 | 65.19 |
| TraesCS4A01G356400.2 | Wheat | plastid | 65.02 | 65.02 |
| TraesCS5D01G515900.2 | Wheat | plastid | 64.87 | 64.87 |
| TraesCS5B01G515800.1 | Wheat | cytosol, peroxisome, plastid | 64.87 | 64.87 |
| Zm00001d034758_P003 | Maize | plastid | 63.08 | 61.97 |
| HORVU5Hr1G117970.2 | Barley | plastid | 64.42 | 61.93 |
| Zm00001d046434_P003 | Maize | plastid | 51.87 | 56.98 |
| HORVU5Hr1G025310.1 | Barley | cytosol | 39.91 | 55.51 |
| TraesCS5D01G106400.1 | Wheat | cytosol | 42.3 | 53.8 |
| Zm00001d012892_P002 | Maize | plastid | 62.78 | 53.64 |
| TraesCS5A01G094000.1 | Wheat | cytosol | 42.15 | 53.51 |
| TraesCS5B01G100100.1 | Wheat | cytosol | 42.15 | 53.31 |
| Os12t0540800-01 | Rice | extracellular | 40.96 | 51.99 |
| EES16101 | Sorghum | cytosol, nucleus, plastid | 39.46 | 48.98 |
| Solyc11g007960.1.1 | Tomato | cytosol | 34.38 | 46.75 |
| Zm00001d041692_P001 | Maize | nucleus | 36.32 | 44.75 |
| Solyc01g067480.2.1 | Tomato | mitochondrion | 24.96 | 25.42 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 11.66 | 23.93 |
| Solyc11g007320.1.1 | Tomato | cytosol | 13.45 | 17.96 |
| Solyc03g114960.2.1 | Tomato | nucleus | 14.2 | 17.53 |
| Solyc03g111390.2.1 | Tomato | nucleus | 15.55 | 15.38 |
| Solyc01g100600.2.1 | Tomato | cytosol | 10.46 | 14.03 |
| Solyc05g055610.2.1 | Tomato | cytosol | 17.79 | 11.97 |
Protein Annotations
| Gene3D:1.20.80.10 | Gene3D:2.120.10.80 | MapMan:35.1 | InterPro:Acyl-CoA-binding_protein | InterPro:Acyl-CoA-binding_sf | ncoils:Coil |
| InterPro:FERM/acyl-CoA-bd_prot_sf | GO:GO:0000062 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000582 |
| InterPro:IPR014352 | InterPro:IPR015915 | UniProt:K4B0X2 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PFAM:PF00887 |
| PFAM:PF01344 | PFAM:PF13415 | PFAM:PF13418 | PFscan:PS51228 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF336 |
| SUPFAM:SSF117281 | SUPFAM:SSF47027 | EnsemblPlantsGene:Solyc01g099350.2 | EnsemblPlants:Solyc01g099350.2.1 | UniParc:UPI0002768D6A | SEG:seg |
Description
No Description!
Coordinates
chr1:+:89629105..89642491
Molecular Weight (calculated)
72937.4 Da
IEP (calculated)
4.893
GRAVY (calculated)
-0.454
Length
669 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMARVSSGL AYPERFYAAA SYAGFDGSSD SSTKGVSSKF SNDAALLLYA LYQQATVGPC KIPKPRSWSP VEQSKWTSWN GLGNMVSTEA MRLFVKILEE
101: EDPGWYSRAS NFVSEPAVQG EKNNETITEP VTENGNVLPE IKTIPAEKGS LSEPQDKDVV SEGSGAVGVY DQWVSPPISG PRPKPRYEHG AAVIDDKMYI
201: FGGNHNGRYL SDLQALDLRS WTWSKIEVKS SGEASQAPVA PFAGHSLIPW GGNKLISIGG HTKDPSETMQ VKVFDLQTHT WSNLKTYGKP PLSRGGHSVT
301: LTGTSLVIFG GQDANRSLLN DLHILDLETM TWDEMDTLGV APSPRSDHAA AVHAERYLLI FGGGSHATCF NDLHVLDLQT MEWSTPTQQG EIPSPRAGHA
401: GVTVGENWFI TGGGNNKSGV SETVVLNMST LGWSTVTTVQ GRVPLASEGL SLVLCSYNGE DILVSFGGYN GRYSNEVNVL KPSHRSTLQS METPVPDSVS
501: AMQNATNATR DLESDIATVQ EGKIREIVVD NIESEPMVNK VEETSERLLA ALKAEKEDLE SSLSKEKLQT LQLKQDLTDA EARNTDLYKE LQSVRGQLAS
601: EQSRCFKLEV DVAELRQKLQ TLESLKKELE LLQRQKAASE QALNEKRRQS SGGVWGWIAG TPPNQQDDA
101: EDPGWYSRAS NFVSEPAVQG EKNNETITEP VTENGNVLPE IKTIPAEKGS LSEPQDKDVV SEGSGAVGVY DQWVSPPISG PRPKPRYEHG AAVIDDKMYI
201: FGGNHNGRYL SDLQALDLRS WTWSKIEVKS SGEASQAPVA PFAGHSLIPW GGNKLISIGG HTKDPSETMQ VKVFDLQTHT WSNLKTYGKP PLSRGGHSVT
301: LTGTSLVIFG GQDANRSLLN DLHILDLETM TWDEMDTLGV APSPRSDHAA AVHAERYLLI FGGGSHATCF NDLHVLDLQT MEWSTPTQQG EIPSPRAGHA
401: GVTVGENWFI TGGGNNKSGV SETVVLNMST LGWSTVTTVQ GRVPLASEGL SLVLCSYNGE DILVSFGGYN GRYSNEVNVL KPSHRSTLQS METPVPDSVS
501: AMQNATNATR DLESDIATVQ EGKIREIVVD NIESEPMVNK VEETSERLLA ALKAEKEDLE SSLSKEKLQT LQLKQDLTDA EARNTDLYKE LQSVRGQLAS
601: EQSRCFKLEV DVAELRQKLQ TLESLKKELE LLQRQKAASE QALNEKRRQS SGGVWGWIAG TPPNQQDDA
001: MAMPRATSGP AYPERFYAAA SYVGLDGSDS SAKNVISKFP DDTALLLYAL YQQATVGPCN TPKPSAWRPV EQSKWKSWQG LGTMPSIEAM RLFVKILEED
101: DPGWYSRASN DIPDPVVDVQ INQRAKDEPV VENGSTFSET KTISTENGRL AETQDKDVVS EDSNTVSVYN QWTAPQTSGQ RPKARYEHGA AVIQDKMYIY
201: GGNHNGRYLG DLHVLDLKSW TWSRVETKVA TESQETSTPT LLAPCAGHSL IAWDNKLLSI GGHTKDPSES MQVKVFDPHT ITWSMLKTYG KPPVSRGGQS
301: VTMVGKTLVI FGGQDAKRSL LNDLHILDLD TMTWDEIDAV GVSPSPRSDH AAAVHAERFL LIFGGGSHAT CFDDLHVLDL QTMEWSRPAQ QGDAPTPRAG
401: HAGVTIGENW FIVGGGDNKS GASESVVLNM STLAWSVVAS VQGRVPLASE GLSLVVSSYN GEDVLVAFGG YNGRYNNEIN LLKPSHKSTL QTKTLEAPLP
501: GSLSAVNNAT TRDIESEVEV SQEGRVREIV MDNVNPGSKV EGNSERIIAT IKSEKEELEA SLNKERMQTL QLRQELGEAE LRNTDLYKEL QSVRGQLAAE
601: QSRCFKLEVD VAELRQKLQT LETLQKELEL LQRQKAASEQ AAMNAKRQGS GGVWGWLAGS PQEKDDDSP
101: DPGWYSRASN DIPDPVVDVQ INQRAKDEPV VENGSTFSET KTISTENGRL AETQDKDVVS EDSNTVSVYN QWTAPQTSGQ RPKARYEHGA AVIQDKMYIY
201: GGNHNGRYLG DLHVLDLKSW TWSRVETKVA TESQETSTPT LLAPCAGHSL IAWDNKLLSI GGHTKDPSES MQVKVFDPHT ITWSMLKTYG KPPVSRGGQS
301: VTMVGKTLVI FGGQDAKRSL LNDLHILDLD TMTWDEIDAV GVSPSPRSDH AAAVHAERFL LIFGGGSHAT CFDDLHVLDL QTMEWSRPAQ QGDAPTPRAG
401: HAGVTIGENW FIVGGGDNKS GASESVVLNM STLAWSVVAS VQGRVPLASE GLSLVVSSYN GEDVLVAFGG YNGRYNNEIN LLKPSHKSTL QTKTLEAPLP
501: GSLSAVNNAT TRDIESEVEV SQEGRVREIV MDNVNPGSKV EGNSERIIAT IKSEKEELEA SLNKERMQTL QLRQELGEAE LRNTDLYKEL QSVRGQLAAE
601: QSRCFKLEVD VAELRQKLQT LETLQKELEL LQRQKAASEQ AAMNAKRQGS GGVWGWLAGS PQEKDDDSP
Arabidopsis Description
ACBP4acyl-CoA binding protein 4 [Source:TAIR;Acc:AT3G05420]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.