Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400007146 | Potato | cytosol | 95.99 | 73.24 |
| VIT_14s0060g01090.t01 | Wine grape | nucleus | 49.3 | 38.44 |
| KRH33805 | Soybean | nucleus | 42.08 | 33.28 |
| Zm00001d040606_P001 | Maize | cytosol | 41.28 | 33.23 |
| KRG90521 | Soybean | peroxisome | 41.68 | 32.96 |
| EES00630 | Sorghum | cytosol | 40.48 | 32.95 |
| GSMUA_Achr8P29940_001 | Banana | cytosol | 40.88 | 32.38 |
| Os01t0300900-01 | Rice | cytosol | 40.48 | 32.37 |
| TraesCS3D01G195400.1 | Wheat | cytosol, mitochondrion, nucleus, vacuole | 38.68 | 32.17 |
| TraesCS3A01G192200.1 | Wheat | cytosol, mitochondrion, nucleus, vacuole | 38.68 | 31.85 |
| Zm00001d009123_P001 | Maize | cytosol | 39.88 | 31.84 |
| TraesCS3B01G221000.2 | Wheat | cytosol, mitochondrion, nucleus, vacuole | 38.28 | 31.57 |
| HORVU3Hr1G040720.1 | Barley | mitochondrion, nucleus, peroxisome, vacuole | 38.68 | 31.18 |
| KRH68432 | Soybean | cytosol, nucleus, plastid | 36.87 | 29.02 |
| KRG96716 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 37.68 | 26.22 |
| Solyc03g114960.2.1 | Tomato | nucleus | 15.63 | 14.39 |
| Solyc11g007960.1.1 | Tomato | cytosol | 11.02 | 11.18 |
| Solyc11g007320.1.1 | Tomato | cytosol | 11.02 | 10.98 |
| Solyc01g099350.2.1 | Tomato | extracellular | 14.03 | 10.46 |
| Solyc05g024410.2.1 | Tomato | cytosol, extracellular, plastid | 6.61 | 10.12 |
| Solyc01g067480.2.1 | Tomato | mitochondrion | 11.62 | 8.83 |
| Solyc03g111390.2.1 | Tomato | nucleus | 11.62 | 8.58 |
| Solyc05g055610.2.1 | Tomato | cytosol | 11.42 | 5.73 |
Protein Annotations
| EnsemblPlants:Solyc01g100600.2.1 | EnsemblPlantsGene:Solyc01g100600.2 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF417 | PFAM:PF13964 | SEG:seg |
| SUPFAM:SSF117281 | UniParc:UPI00027676D6 | UniProt:K4B191 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr1:-:90578451..90581926
Molecular Weight (calculated)
54582.3 Da
IEP (calculated)
8.003
GRAVY (calculated)
-0.565
Length
499 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSLGGEVSV SLLQKKKPMW SSPEVRGEMP VPRDSHSAVA IGNRLFIYGG DCGDRYQGDV DVLDMDTLMW SKLDVLGPSP DARAGHASVN FGSKVYVIGG
101: VGDKKYYNDV WVLDVINSSW TQLDVTGQKP QGRFSHTAAS RNTDIVIYGG CGEDERPLNE LLILQFGVEY PNGTSSLSGG RVSGNTSHYD KKRFLKERDN
201: SSEAICRGKK EDIQTTGSQE LEFVSKAAFR FSSDTLHPKR RRMSHNSHIF NLESDQEEDQ SPSLSQCCSP PSQSDVEMST IKQVSGSGTA SDRFPFARQQ
301: HLIPNNCQPN PRNVIARNPH DLQLFREQSN PSNSSGHVPP AVLMDKQEVQ CQSLEPGRFH NLIGAEIRGK VDGAFDSGYL MTAIVNGKIF RGVLFAPAPD
401: LVPRGPVLGH NPSPSPGHIG VNYANHISLG CRRQPQQQQL VQLQVPELGR HSIGKVPIRR STSSVMRSSH QLDKDTQKRS ELEGVVLTLG GPGCGNAKT
101: VGDKKYYNDV WVLDVINSSW TQLDVTGQKP QGRFSHTAAS RNTDIVIYGG CGEDERPLNE LLILQFGVEY PNGTSSLSGG RVSGNTSHYD KKRFLKERDN
201: SSEAICRGKK EDIQTTGSQE LEFVSKAAFR FSSDTLHPKR RRMSHNSHIF NLESDQEEDQ SPSLSQCCSP PSQSDVEMST IKQVSGSGTA SDRFPFARQQ
301: HLIPNNCQPN PRNVIARNPH DLQLFREQSN PSNSSGHVPP AVLMDKQEVQ CQSLEPGRFH NLIGAEIRGK VDGAFDSGYL MTAIVNGKIF RGVLFAPAPD
401: LVPRGPVLGH NPSPSPGHIG VNYANHISLG CRRQPQQQQL VQLQVPELGR HSIGKVPIRR STSSVMRSSH QLDKDTQKRS ELEGVVLTLG GPGCGNAKT
001: MRWERVQQVG LGDSSSFGPG KRWGHTCNAI KGGRFLYVFG GFGRDNCLTN QVHVFDAETQ IWIRPEINGV PPCPRDSHSC TTVGDNLFVF GGTDGTKYLN
101: DVHILDTYSH TWIRPDIRGE GPRVREAHSA ALVDKRLFIF GGCGKSSDSD DEVFYNDLYI LNTETYMWKR AVTSGKPPSA RDSHTCSAWK NKIIVVGGED
201: LDDYYLSDVH ILDTDKFVWK ELKTSGQVLT PRAGHVTVAL ERNLFVFGGF TDSQNLYDDL YVLDLETGVW SKVVAMVEGP SARFSSAAVC LDPYKAGSFF
301: FVGGCNKNLE PLDDIYYLHT GRYDVRFHQN PGRSSLRKQM KLKCQGQELT VAKTNIDHGR ENVPLNIGYI DQRKPMFQAR VTENAPLGYT IETIIDGKVL
401: RGVLFSNRHS SVRIADSSIS SRERPATSDG DCDHRAKIPR TFSKDPAGSS QQAGPTDPSD DTNKKVADSN DTDTPMIDTV DANVNMEGTH EAETAAVTID
501: AKDQDASQLD KGIVNTDPLP VSHDQVNVIS TDAAKADPGV DSSTRKQEEG TSAEEDANVG PQPQQH
101: DVHILDTYSH TWIRPDIRGE GPRVREAHSA ALVDKRLFIF GGCGKSSDSD DEVFYNDLYI LNTETYMWKR AVTSGKPPSA RDSHTCSAWK NKIIVVGGED
201: LDDYYLSDVH ILDTDKFVWK ELKTSGQVLT PRAGHVTVAL ERNLFVFGGF TDSQNLYDDL YVLDLETGVW SKVVAMVEGP SARFSSAAVC LDPYKAGSFF
301: FVGGCNKNLE PLDDIYYLHT GRYDVRFHQN PGRSSLRKQM KLKCQGQELT VAKTNIDHGR ENVPLNIGYI DQRKPMFQAR VTENAPLGYT IETIIDGKVL
401: RGVLFSNRHS SVRIADSSIS SRERPATSDG DCDHRAKIPR TFSKDPAGSS QQAGPTDPSD DTNKKVADSN DTDTPMIDTV DANVNMEGTH EAETAAVTID
501: AKDQDASQLD KGIVNTDPLP VSHDQVNVIS TDAAKADPGV DSSTRKQEEG TSAEEDANVG PQPQQH
Arabidopsis Description
Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HTV1]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.